| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,532,987 | +G | 91.4% | intergenic (‑6/‑19) | RCAP_rcc03340 ← / → RCAP_rcc03341 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,532,987 | 1 | .→G | 91.4% | 96.3 ‑0.5 ‑0.8 | 385 | intergenic (‑6/‑19) | RCAP_rcc03340/RCAP_rcc03341 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (172/180): ref base (14/19): total (186/199) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.85e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.48e-01 | ||||||||||
Only 100 of 420 total aligned reads displayed.
AGCGGGGAAAGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTC.GG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.C.GG.CC.C.GCCCTTCGATCCAGTGCAGCCAACCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.CTGCGCGCCCGGCAGGGCCGCCAGATCGTGC > NC_014034/3532888‑3533080
|
aGCGGGGAAAGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.c > 2:7164630/1‑101 (MQ=255)
aGCGGGGAAAGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.c > 1:2012428/1‑101 (MQ=255)
gCGGGGAAAGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.C.g < 2:6266816/101‑1 (MQ=255)
cGGGGAAAGCGGAGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.C.gg > 2:8830213/1‑101 (MQ=255)
ggggAAAGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.C.ggg > 1:6015768/1‑100 (MQ=255)
gggAAAGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.C.gggc > 1:322700/1‑99 (MQ=255)
ggAAAGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.C.Gg.gc.c < 2:6704092/101‑1 (MQ=255)
gAAAGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.C.Gg.gc.cc > 2:489333/1‑100 (MQ=255)
aaggcggcgCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.C.Gg.gc.ccg < 2:6861772/98‑3 (MQ=255)
aaaGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.C.Gg.gc.ccg < 1:4424879/101‑3 (MQ=255)
aGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.C.Gg.gc.ccggc < 1:2850886/101‑5 (MQ=255)
cggcgCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.C.Gg.gc.ccggccc < 2:8598333/101‑7 (MQ=255)
cggcgCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.C.Gg.gc.ccggccc > 2:3648177/1‑95 (MQ=255)
ggcgCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.C.Gg.gc.ccggccct > 2:4579700/1‑94 (MQ=255)
cgcCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTc > 2:3211067/1‑101 (MQ=255)
gcCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCg > 1:6324590/1‑101 (MQ=255)
gcCTGGCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCg < 1:2989570/101‑1 (MQ=255)
cTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGAt < 1:7144943/101‑1 (MQ=255)
cTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGAt < 1:415857/101‑1 (MQ=255)
gtgggTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATcc < 1:6812915/98‑1 (MQ=255)
gTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATcc > 1:8004039/1‑101 (MQ=255)
cGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAg < 2:2505050/101‑1 (MQ=255)
cGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAg > 2:4472353/1‑101 (MQ=255)
cGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAg < 1:3635817/101‑1 (MQ=255)
cGGCCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAg < 2:5398754/101‑1 (MQ=255)
ggTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGt > 2:3126774/1‑101 (MQ=255)
ggTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGt > 1:6677697/1‑101 (MQ=255)
ccAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCa > 1:5833082/1‑101 (MQ=255)
gCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGcc < 2:5346479/101‑1 (MQ=255)
gCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGcc < 2:568340/101‑1 (MQ=255)
gaccgaAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCagc < 2:1173612/101‑3 (MQ=255)
gaccgaAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.C.GGACC.CGGCCCTTCGATCCAGTGCAGCCagc > 1:6394335/1‑99 (MQ=255)
accgaAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCGGCGCCATCCCGGCCCACAGCCG.CTGG.CCGG.GCCCTTCGCTCCAGTCCAGcagggc > 2:3459676/1‑96 (MQ=255)
cgaAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCgc > 1:1070959/1‑100 (MQ=255)
gaAAGCAGCCGCGCCGCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTc < 2:7615862/101‑1 (MQ=255)
aaaGCAGCCGCGCCTCGGCCTGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCTTcc < 1:7203212/101‑1 (MQ=255)
aaaGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTcc > 2:7495114/1‑101 (MQ=255)
aaaGCAGCCGCGCCTCGACCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTcc > 2:1438719/1‑101 (MQ=255)
aaGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCt > 2:8536879/1‑101 (MQ=255)
agcagcCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTc < 2:6394086/101‑1 (MQ=255)
gcagcCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCg < 2:5202155/101‑1 (MQ=255)
cagcCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGa < 2:6015533/101‑1 (MQ=255)
agcCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGAc > 2:7941515/1‑101 (MQ=255)
gcCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGAcc < 1:6587803/101‑1 (MQ=255)
gcCGCGCCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGAcc < 2:8159175/101‑1 (MQ=255)
gcgcCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCa < 1:3126873/101‑1 (MQ=255)
cgcCTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCaa < 1:4869586/101‑1 (MQ=255)
ccTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAAcc > 2:4396981/1‑101 (MQ=255)
ccTCGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAAcc < 1:258576/101‑1 (MQ=255)
cGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTc < 2:4733789/101‑1 (MQ=255)
cGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTc > 1:5560487/1‑101 (MQ=255)
cGGCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCCTCCTCGACCGCCACCGTc > 2:515531/1‑101 (MQ=255)
ggCCAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCg > 2:7269068/1‑101 (MQ=255)
ggCCAGCCGGGGGTCGGG.GGCGATCTGCGCCACCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCg > 2:7677968/1‑101 (MQ=255)
ccAGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGcc < 1:9097452/101‑1 (MQ=255)
aGCCGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGcccc < 1:8352192/101‑1 (MQ=255)
ccGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGc < 2:8789965/101‑1 (MQ=255)
ccGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGc > 1:4704151/1‑101 (MQ=255)
cGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGca > 2:1251021/1‑101 (MQ=255)
cGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGca > 2:6980580/1‑101 (MQ=255)
cGGGGGTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGca < 1:4029045/101‑1 (MQ=255)
gggggTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGcac < 2:2012367/101‑1 (MQ=255)
gggggTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGcac > 1:8298005/1‑101 (MQ=255)
ggggTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGcaca < 2:5832847/101‑1 (MQ=255)
ggggTCGGG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGcaca < 2:7800551/101‑1 (MQ=255)
ggTC.GGAGGCGATCTGCGCCATCGCGGCGCAAACCCGCC.GG.CC.CGGCCCTTCGATCCAGCCCACCCAGCCGTCCTCGACCGCAACCTTCGCCCCGCACAGa < 1:343507/101‑1 (MQ=255)
gtcggg.ggCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAt < 1:5126900/97‑1 (MQ=255)
cggg.ggCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cc < 1:4072705/99‑2 (MQ=255)
ggg.ggCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cct < 1:3091255/100‑3 (MQ=255)
ggg.ggCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cct < 2:901303/100‑3 (MQ=255)
ggg.ggCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cct < 1:1463018/100‑3 (MQ=255)
ggg.ggCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cct > 2:1763017/2‑99 (MQ=255)
ggg.ggCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cct > 1:7014884/2‑99 (MQ=255)
ggg.ggCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cct > 1:3824814/2‑99 (MQ=255)
ggCGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cctgcg > 2:2783752/1‑96 (MQ=255)
cGATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTgcgcg > 2:8250144/1‑101 (MQ=255)
gATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTgcgcgc > 1:812082/1‑101 (MQ=255)
gATCTGCGCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTgcgcgc < 1:887050/101‑1 (MQ=255)
tCTGCTCCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGccc < 1:7450390/101‑1 (MQ=255)
gcgcCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGc < 1:5337934/101‑1 (MQ=255)
cgcCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGcccagat > 1:7637596/1‑97 (MQ=255)
gcCATCGCGGCGCAAAGCTT.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAg > 1:2442505/1‑101 (MQ=255)
gcCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAg < 1:7112208/101‑1 (MQ=255)
gcCATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAg > 2:415068/1‑101 (MQ=255)
ccATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGCTCCTGCGCGCCCGGCCgg > 1:851050/1‑101 (MQ=255)
cATCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAggg < 2:2346351/101‑1 (MQ=255)
aTCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGgc > 2:8047046/1‑101 (MQ=255)
tCGCGGCGCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGgcc < 2:3866345/101‑1 (MQ=255)
cggcgCAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGgccgcc < 2:1496708/101‑1 (MQ=255)
gcgcAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAg < 1:4579835/101‑1 (MQ=255)
gcAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGAt > 1:5737938/1‑101 (MQ=255)
ccAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGAt < 2:1548930/100‑1 (MQ=255)
cAAAGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGATc > 1:4786912/1‑101 (MQ=255)
aaaGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGCCCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCACATCg > 2:2955273/1‑101 (MQ=255)
aaaGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGATCg < 1:7848321/101‑1 (MQ=255)
aaaGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGATCg > 1:4903521/1‑101 (MQ=255)
aaaGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGATCg > 1:1627525/1‑101 (MQ=255)
aaaGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGATCg > 1:2649097/1‑101 (MQ=255)
aaaGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGATCg > 2:40163/1‑101 (MQ=255)
aaGCTG.CGGG.CC.CGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGATCGt > 1:1815102/1‑101 (MQ=255)
|
AGCGGGGAAAGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTC.GG.GGCGATCTGCGCCATCGCGGCGCAAAGCTG.C.GG.CC.C.GCCCTTCGATCCAGTGCAGCCAACCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.CTGCGCGCCCGGCAGGGCCGCCAGATCGTGC > NC_014034/3532888‑3533080
Base quality scores:
ATCG
< 3 ≤
ATCG
< 22 ≤
ATCG
< 30 ≤
ATCG
< 34 ≤
ATCG
< 40 ≤
ATCG
|