| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,609,080 | +C | 98.4% | intergenic (+19/‑152) | clpB → / → dinB | chaperone ClpB/DNA polymerase IV |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,609,080 | 1 | .→C | 98.4% | 10.5 ‑0.8 ‑0.9 | 443 | intergenic (+19/‑152) | clpB/dinB | chaperone ClpB/DNA polymerase IV |
| Reads supporting (aligned to +/- strand): new base (164/272): ref base (4/3): total (168/275) | ||||||||||
| Fisher's exact test strand distribution p-value = 4.34e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.14e-01 | ||||||||||
Only 100 of 486 total aligned reads displayed.
GCCGGTCCCGACGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.T.GGGG.GCTCTG.CCC.C.C..GCTTCGCTCCCCCCGGGATATTT.G.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCC > NC_014034/3608981‑3609174
|
cgGTCCCGACGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTG.cc > 1:6953447/1‑101 (MQ=255)
ggTCCCGACGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTG.ccc > 1:3074303/1‑101 (MQ=255)
gTCCCGACGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GGTCTG.ccc.c > 2:1535332/1‑101 (MQ=255)
gTCCCGACGGGCTGGTGGGCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGGCCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTG.ccc.c < 2:8504463/101‑1 (MQ=255)
ccGACGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTG.ccc.c.ccg < 2:4931009/101‑3 (MQ=255)
gACGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTG.ccc.c.ccgct < 2:512750/101‑5 (MQ=255)
cGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTc < 1:8362948/101‑1 (MQ=255)
cGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTc < 1:2010541/101‑1 (MQ=255)
cTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTc > 1:7937401/1‑101 (MQ=255)
gtggtCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTcccc < 2:1096807/101‑1 (MQ=255)
ggtCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTcccccc < 2:5594025/101‑1 (MQ=255)
ggtCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTcccccc < 2:8592214/101‑1 (MQ=255)
gggcggcggCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTcccccc < 2:2863477/98‑1 (MQ=255)
gtCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCg > 1:1718082/1‑101 (MQ=255)
gtCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCg > 1:8924535/1‑101 (MQ=255)
gtCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCg > 2:8214247/1‑101 (MQ=255)
gcggcAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGat < 2:2112218/101‑1 (MQ=255)
ggcAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGatat > 2:4994124/1‑101 (MQ=255)
ggcAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGatat > 2:1173373/1‑101 (MQ=255)
ggcAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGatat < 2:2600011/101‑1 (MQ=255)
gcAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATAtt > 2:672806/1‑101 (MQ=39)
gcAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATAtt < 1:7674534/101‑1 (MQ=39)
cAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATAttt < 2:7262183/101‑1 (MQ=39)
aaGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTT.g > 1:1443298/1‑101 (MQ=39)
ggTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTT.g.gg > 2:1390273/1‑101 (MQ=39)
ggTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTT.g.gg < 2:4226091/101‑1 (MQ=39)
gTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTT.g.ggg < 2:62723/101‑2 (MQ=39)
ctcGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTT.g.gggca > 1:3681881/1‑98 (MQ=38)
ctcGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTT.g.gggca > 2:1684703/1‑98 (MQ=38)
ggCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAgg > 2:3524380/1‑101 (MQ=38)
ccagccagCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTa < 1:5530876/101‑1 (MQ=38)
cagccagcGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTaa > 1:8498531/1‑101 (MQ=38)
cagccagcGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTaa < 1:2145381/101‑1 (MQ=38)
gccagcGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTaaaa < 1:990776/101‑1 (MQ=38)
gccagcGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTaaaa < 1:534378/101‑1 (MQ=38)
gccagcGCGTACAGACCGAACCGCGCGTGCTGAACTGATACGGGAGAG.GGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTT.GAGGCAAGGTaaaa > 2:5921067/1‑101 (MQ=37)
cagcGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGc < 1:6264979/101‑1 (MQ=38)
gcgcGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCAt < 1:5770205/101‑1 (MQ=38)
ctcgTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTG.CCCTC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCAtt < 1:4994777/99‑1 (MQ=37)
cgcgTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCAtt < 2:8094348/101‑1 (MQ=38)
cgcgTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTG.CCC.CAC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCAtt > 2:1308876/1‑101 (MQ=38)
gcgTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTg > 2:4087531/1‑101 (MQ=37)
gTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGcc < 2:2187482/101‑1 (MQ=38)
gTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGcc > 2:5983769/1‑101 (MQ=37)
gTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGcc > 1:1017086/1‑101 (MQ=37)
tCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGccc < 1:8704492/101‑1 (MQ=38)
ccAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCt > 1:809169/1‑101 (MQ=37)
cAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCtt > 1:1206858/1‑101 (MQ=37)
cAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCtt > 1:7751931/1‑101 (MQ=37)
aGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCttt > 1:4131636/1‑101 (MQ=37)
aGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCttt < 1:461736/101‑1 (MQ=38)
aGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCttt < 2:4805902/101‑1 (MQ=38)
aGACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCttt < 1:7142300/101‑1 (MQ=38)
gACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTa > 2:5825164/1‑101 (MQ=37)
gACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTa < 2:3317283/101‑1 (MQ=38)
gACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTa < 2:3155460/101‑1 (MQ=38)
gACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTa < 1:1920546/101‑1 (MQ=38)
gACCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTa < 1:3903093/101‑1 (MQ=38)
aCCGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTAt < 1:1377593/101‑1 (MQ=38)
ccGAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATc > 1:2806487/1‑101 (MQ=37)
gAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCtt < 2:648927/101‑1 (MQ=38)
gAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCtt < 2:5703479/101‑1 (MQ=38)
gAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCtt < 1:1519617/101‑1 (MQ=38)
gAACCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCtt < 2:7526699/101‑1 (MQ=38)
aaCCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCttc > 2:1283628/1‑100 (MQ=37)
aaCCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTg > 1:7325499/1‑101 (MQ=37)
aaCCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTg < 1:6573447/101‑1 (MQ=38)
aCCGCGCGTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGc < 2:1925633/101‑1 (MQ=38)
gcgcgTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTc < 1:5200934/101‑1 (MQ=38)
cgcgTGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCa < 1:3258773/101‑1 (MQ=38)
tGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGata < 1:2617356/101‑1 (MQ=38)
tGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGata > 2:2439811/1‑101 (MQ=37)
tGCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGata < 1:3843508/101‑1 (MQ=38)
gCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGatat < 2:7148105/101‑1 (MQ=38)
gCTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGatat < 1:1270883/101‑1 (MQ=37)
cTGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATc < 1:6858622/101‑1 (MQ=38)
tGAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATcc > 1:227831/1‑101 (MQ=37)
gAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATccc > 2:7361561/1‑101 (MQ=37)
gAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATccc < 2:1807509/101‑1 (MQ=37)
gAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATccc < 2:4511791/101‑1 (MQ=37)
gAACTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATccc > 1:8214832/1‑101 (MQ=37)
gAACTGATACGGGAG.T.GGGGCGCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATACccc < 1:7218910/101‑1 (MQ=37)
aCTGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCgg < 1:6414695/101‑1 (MQ=37)
tGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCgggg > 2:3595192/1‑101 (MQ=37)
tGATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGAATTGCCCTTTATCTTGCCTCAGATATCCCgggg > 2:5483361/1‑101 (MQ=37)
gATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCggggg > 1:1774846/1‑101 (MQ=37)
gATACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCggggg > 2:5288271/1‑101 (MQ=37)
tACGGGAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTg < 2:8762005/101‑1 (MQ=38)
gggAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAAt > 1:9053889/1‑101 (MQ=25)
ggAG.TGGGGG.GCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAAtt < 1:4456117/101‑1 (MQ=37)
gagtggggg.gCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAAttt > 1:4265635/6‑101 (MQ=25)
gagtggggg.gCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAAttt < 2:3703104/96‑1 (MQ=37)
acggggg.gCTCTG.CCC.C.CCGGCTTCGCTCCCCCCGGGGTATTT.GCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTGAAttgg > 2:7767833/4‑99 (MQ=2)
ggggg.gCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGgc > 2:3007537/2‑101 (MQ=37)
gggg.gCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGgcg > 2:5387020/1‑101 (MQ=37)
g.gCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAg > 2:2765263/1‑101 (MQ=37)
gCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGc < 1:8793171/101‑1 (MQ=37)
gCTCTGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGc < 2:9029381/101‑1 (MQ=37)
ctctGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGcc > 1:4796770/1‑101 (MQ=37)
ctctGCCCC.C.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGcc < 1:3366428/101‑1 (MQ=37)
|
GCCGGTCCCGACGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAG.T.GGGG.GCTCTG.CCC.C.C..GCTTCGCTCCCCCCGGGATATTT.G.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCC > NC_014034/3608981‑3609174
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|