| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 842,029 | +G | 1.7% | coding (1673/2220 nt) | hypF → | hydrogenase maturation protein HypF |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 842,029 | 1 | .→G | 1.7% | 6.8 ‑4.4 ‑0.0 | 291 | coding (1673/2220 nt) | hypF | hydrogenase maturation protein HypF |
| Reads supporting (aligned to +/- strand): new base (5/0): ref base (117/169): total (122/169) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.23e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.80e-01 | ||||||||||
Only 100 of 370 total aligned reads displayed.
GGCTTCGAGCGGGTGGCCTGGCTGAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAGGGGATCAACGCGCCGCTGTCGTCCAGC > NC_014034/841929‑842129
|
tCGAGCGGGTGGCCTGGCTGAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.gggg > 1:8380241/1‑101 (MQ=255)
aGCGGGTGGCCTGGCTGAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGG.CGGGcgt > 2:4517949/1‑99 (MQ=255)
aGCGGGTGGCCTGGCTGAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCtt < 2:7793644/101‑1 (MQ=255)
aGCGGGTGGCCTGGCTGAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCtt < 1:6144249/101‑1 (MQ=255)
gCGGGTGGCCTGGCTGAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCttt < 1:8162950/101‑1 (MQ=255)
cGGGTGGCCTGGCTGAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTc < 1:3976343/101‑1 (MQ=255)
cGGGTGGCCTGGCTGAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTc < 1:8598819/101‑1 (MQ=255)
cGGGTGGCCTGGCTGAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCGTTc > 1:4533865/1‑101 (MQ=255)
cGGGTGGCCGGGCTGAAACCCGCGCCCCTGTTCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTc < 2:9055050/101‑1 (MQ=255)
gggTGGCCTGGCTGAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCgtttc > 1:6510614/1‑99 (MQ=255)
gggTGGCCTGGCTGAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTcc < 1:8876470/101‑1 (MQ=255)
gggTGGCCTGGCTGAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTcc < 2:6289985/101‑1 (MQ=255)
gTGGCCTGGCTGAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGGCGCGGC.cggggcctcgcc > 2:359137/1‑93 (MQ=255)
tGGCCTGGCTGAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGAt < 1:1302580/101‑1 (MQ=255)
tGGCCTGGCTGAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGAt < 1:5910669/101‑1 (MQ=255)
tGGCCTGGCTGAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGAttttccat > 2:6217326/1‑96 (MQ=255)
ccTGGCTGAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTg < 2:1728718/101‑1 (MQ=255)
tGGCTGAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGGGTTTCGGTCTGGc > 1:1898660/1‑101 (MQ=255)
tGGCTGAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCttttcccgctggc > 1:1629061/1‑91 (MQ=255)
ggCTGAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGcc < 2:7594095/101‑1 (MQ=255)
ggCTGAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGcc < 1:1092299/101‑1 (MQ=255)
gCTGAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGGCTTTCGGTCTgggcc > 2:7261910/1‑98 (MQ=255)
gCTGAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCg < 2:2628695/101‑1 (MQ=255)
cTGAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGAGCTGGTGCGGCTTGAAGCGGC.GGGGGCTTCCGATATGGcccg > 2:458636/1‑99 (MQ=255)
tGAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGAc < 2:7471750/101‑1 (MQ=255)
gAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTTCGATCTGGCCGAcc > 1:5489099/1‑101 (MQ=255)
gAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGCC.GGGGATTTCCGCGCTTGCCgcgc > 2:16053/1‑98 (MQ=255)
aaaCCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTTCGATCTGGccccgcg > 1:1492558/1‑96 (MQ=255)
aaaCCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.g < 2:5259526/101‑1 (MQ=255)
aaaCCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.CGGGGCTTCCGATCTGGACCACC.g > 2:1599844/1‑101 (MQ=255)
aaCCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGGGTTTCGATGTGGCCCAcccg > 2:3510367/1‑99 (MQ=255)
aaCCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGGGTTCCCCGCTCGGCGACC.gg > 2:5101444/1‑101 (MQ=255)
aaCCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.gg < 1:8014954/101‑1 (MQ=255)
cgcgCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCttt < 2:6839523/101‑1 (MQ=255)
gcgcCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCtttt < 2:6725553/101‑1 (MQ=255)
cgcCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTc < 1:8987561/101‑1 (MQ=255)
gcCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGGTTTTCGGTCTGGGCGACCGGGCTTTTc > 1:7651583/1‑101 (MQ=255)
gcCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGGTTTCCGATCTGGCCGACC.CGCTTTTcc > 2:8404084/1‑101 (MQ=255)
gcCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCCAGCCTGCCGGCC.CGCCTTTcc > 2:3980599/1‑101 (MQ=255)
cccTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGCGGGGGGTTTCCGACTGGGCGGGCC.GGGTTTTtcc > 2:407651/1‑101 (MQ=255)
cccTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTcccc < 2:427924/101‑1 (MQ=255)
ccTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCCTTCCGGTCTGGCCCACC.GGCTTTTtcccc > 2:1934741/1‑100 (MQ=255)
cTGATCGTCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCcgc < 2:7048398/101‑1 (MQ=255)
cTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCcgc < 1:4899467/101‑1 (MQ=255)
aTCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGGTTTTCGGGCTGGCCGACC.CGGTTTTTCCCccggc > 1:3255219/1‑101 (MQ=255)
gcggcgACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGcgccg < 2:606181/101‑1 (MQ=255)
ggcgACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCcgcg < 2:8900446/101‑1 (MQ=255)
gACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGCTCTGGCCGTAC.GGCTTTTTCCCGCGGCGCCCGGCGa > 1:3788067/1‑101 (MQ=255)
ccGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATc < 2:496099/101‑1 (MQ=255)
gggCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTg < 2:8203799/101‑1 (MQ=255)
gggCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTg < 2:5417026/101‑1 (MQ=255)
gcgcAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGc < 2:1530318/101‑1 (MQ=255)
ggcAGATCGAGCTCTGGCGCAATGCGCTGGTGGGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGcc < 2:2727113/100‑1 (MQ=255)
cgcAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTTCCCGCGGCGCCGCGCGATCTGGcc > 2:6677186/1‑101 (MQ=255)
cAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCCCGGCGCCGCGCGATCTGGCCCg > 1:3016545/1‑101 (MQ=255)
aGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCgg < 1:2206715/101‑1 (MQ=255)
aGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCgg > 1:6828591/1‑101 (MQ=255)
aGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCgg > 2:7655879/1‑101 (MQ=255)
gATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGTTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGc < 1:4773073/101‑1 (MQ=255)
cGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGGCC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGccccggcgg > 2:3696205/1‑95 (MQ=255)
gAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCt > 1:6369616/1‑101 (MQ=255)
aGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTg < 2:8093643/101‑1 (MQ=255)
gCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTTCCATCTGGCCGACC.GGCTTTTCCCCCCGGCGCCGCGCGAGCCGGCCCCGcgccccg > 2:284144/1‑95 (MQ=255)
cccTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGGGCCGCGCGGTCTGGCCCGGCaaccggg > 2:8815141/1‑95 (MQ=255)
cccTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTggc < 1:1405308/101‑1 (MQ=255)
ccTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGGTCTGGCCCGGCCGCTggc.g > 1:9124703/1‑101 (MQ=255)
gcgcAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCa < 1:2710581/101‑1 (MQ=255)
cAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAgg > 1:4363113/1‑101 (MQ=255)
aaTGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCCTTTCCCCGCGGCGCCGCGCGGTCTGGCCCGGCAGCCGGC.GGGCCAggg > 1:7284892/1‑101 (MQ=255)
tGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAGGGGa < 2:6546783/101‑1 (MQ=255)
gcgcTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGGGCCGCGCGATCTGGCCCGGCAGGCGGCGGGCCAAGGGGa > 2:867686/1‑101 (MQ=255)
gcgcTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGGCCGGCAGCTGGC.GGGCAAgggggt > 2:1199073/1‑99 (MQ=255)
gcgcTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAGGGGAt < 2:5183127/101‑1 (MQ=255)
gcTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAGGGGATCa < 1:1829562/101‑1 (MQ=255)
cTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAGGGGATCaa < 2:128530/101‑1 (MQ=255)
tGGTGCGGCTTGACGCGGC.GTGGCTTTCCGATCTGGCCGATC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGTC.GGCCAAGGGGATCAAc < 2:4763690/101‑1 (MQ=255)
tGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGGGCCGCGCGGTCTGGCCCGGCCGCTGGC.GGCCCAGGGGATGAAc > 1:288036/1‑101 (MQ=255)
tGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAGGGGATCAAc < 1:809590/101‑1 (MQ=255)
tGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAGGGGATCAAc < 2:3075914/101‑1 (MQ=255)
tGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCCGCAGCTGGC.GGGCCAGGGGGTCAAc > 1:3062927/1‑101 (MQ=255)
ggTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCCAGGGGGTCCAcc > 2:5477681/1‑100 (MQ=255)
ggTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAGGGGGTCaaag > 1:6723894/1‑99 (MQ=255)
ggTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAGGGGGTCCAcg > 1:723954/1‑101 (MQ=255)
gTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAGGGGATCAAcgc < 2:1829967/101‑1 (MQ=255)
ggCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAGGGGATCAACGcgccg < 2:8464214/101‑1 (MQ=255)
ggCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAGGGGATCAACGcgccg < 2:2561071/101‑1 (MQ=255)
ggCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCCCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAGGGGGTCAACGcgccc > 1:3665806/1‑100 (MQ=255)
cTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAGGGGATCAACGCGCCGCt < 1:8459294/101‑1 (MQ=255)
tcgcgGC.GGGGCTTTCCGATCTGGCCGACC.CGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAGGGGATCAACGCGCCGCTgtcg < 1:664698/100‑1 (MQ=255)
aCGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAGGGGATCAACGCGCCGCTgtcg < 1:2461783/101‑1 (MQ=255)
cggc.ggGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAGGGGATCAACGCGCCGCTGTCGTcc < 1:5147917/101‑1 (MQ=255)
cggc.ggGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAGGGGATCAACGCGCCGCTGTCGTcc < 1:3397249/101‑1 (MQ=255)
cggc.ggGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAGGGGATCAACGCGCCGCTGTCGTcc < 1:8228633/101‑1 (MQ=255)
cggc.ggGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAGGGGATCAACGCGCCGCCGGCGTcc > 2:2221588/1‑101 (MQ=255)
ggc.ggGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAGGGGATCAACGCGCCGCTGTCGTCCa < 1:6954191/101‑1 (MQ=255)
ggc.ggGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAGGGGATCAACGCGCCGCTGTCGTCCa < 2:101021/101‑1 (MQ=255)
ggc.ggGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAGGGGATCAACGCGCCGCTGTCGTCCa < 1:407659/101‑1 (MQ=255)
gc.ggGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCGGGC.GGCCAAGGGGATCAACGCGCCGCCGTCGCcccg > 1:5320175/1‑99 (MQ=255)
c.ggGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAGGGGATCAACGCGCCGCTGTCGTCCAgc > 1:6287520/1‑101 (MQ=255)
c.ggGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAGGGGATCAACGCGCCGCTGTCGTCCAgc > 1:600161/1‑101 (MQ=255)
|
GGCTTCGAGCGGGTGGCCTGGCTGAAACCCGCGCCCCTGATCGGCGGCGACCGGGCGCAGATCGAGCCCTGGCGCAATGCGCTGGTGCGGCTTGACGCGGC.GGGGCTTTCCGATCTGGCCGACC.GGCTTTTCCCCGCGGCGCCGCGCGATCTGGCCCGGCAGCTGGC.GGCCAAGGGGATCAACGCGCCGCTGTCGTCCAGC > NC_014034/841929‑842129
Base quality scores:
ATCG
< 3 ≤
ATCG
< 17 ≤
ATCG
< 26 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|