| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 904,934 | +GC | 100% | intergenic (+38/‑158) | RCAP_rcc00821 → / → murB | hypothetical protein/UDP‑N‑acetylmuramate dehydrogenase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 904,934 | 1 | .→G | 100.0% | 92.6 | 304 | intergenic (+38/‑158) | RCAP_rcc00821/murB | hypothetical protein/UDP‑N‑acetylmuramate dehydrogenase |
| Reads supporting (aligned to +/- strand): new base (131/141): ref base (5/26): total (137/167) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.28e-04 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.41e-01 | ||||||||||
| * | NC_014034 | 904,934 | 2 | .→C | 100.0% | 97.6 | 304 | intergenic (+38/‑158) | RCAP_rcc00821/murB | hypothetical protein/UDP‑N‑acetylmuramate dehydrogenase |
| Reads supporting (aligned to +/- strand): new base (131/141): ref base (6/26): total (137/167) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.34e-03 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.45e-01 | ||||||||||
Only 100 of 328 total aligned reads displayed.
GGGCTGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTCTTTTTG.GCT..GC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTGCGGACG > NC_014034/904834‑905025
||
gggCTGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..g < 1:7698736/101‑1 (MQ=255)
ggCTGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..Gc > 1:4960954/1‑101 (MQ=255)
gCTGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..Gcg < 1:7843479/101‑2 (MQ=255)
tgggCGTGCTGCGCTGGCCGTTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..Gcgcc < 2:9119945/98‑4 (MQ=37)
tGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..Gcgcc > 1:9056544/1‑98 (MQ=255)
tGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..Gcgcc > 1:7574544/1‑98 (MQ=255)
tGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..Gcgcc > 1:3196038/1‑98 (MQ=255)
gggCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCCACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..Gcgcca < 2:3230511/99‑5 (MQ=37)
gAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..Gcgcca > 1:1932389/1‑97 (MQ=255)
gAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..Gcgcca < 1:5169030/101‑5 (MQ=255)
gTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..Gcgccaaaat < 2:6617455/101‑9 (MQ=37)
gctgcGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTc > 1:1668536/1‑101 (MQ=25)
gctgcGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..Gcgcccaaattc > 2:1149862/1‑91 (MQ=37)
tgcGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCAc < 1:5829256/101‑1 (MQ=25)
gcgcTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGGCCCCCTCTTTTTGCTGC..GC..CAAAATTCAcc > 1:8156908/1‑101 (MQ=37)
gcTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCAcccc < 2:6226201/101‑1 (MQ=25)
tGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCAcccccc > 2:5344473/1‑101 (MQ=21)
tGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCAcccccc < 2:430093/101‑1 (MQ=21)
tGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCAcccccc < 1:3047500/101‑1 (MQ=21)
tGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCAcccccc < 2:2425389/101‑1 (MQ=21)
ggCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCg < 2:6491659/101‑1 (MQ=21)
ggCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCg < 2:7270485/101‑1 (MQ=21)
ggCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCg > 1:8301583/1‑101 (MQ=21)
ggCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCg < 2:1850961/101‑1 (MQ=21)
ggTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGt > 1:5434029/1‑101 (MQ=21)
ggTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCCGCGt > 2:6108943/1‑101 (MQ=21)
tGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTAt > 2:1956973/1‑101 (MQ=21)
gcggcgGCTCTTTGCCGCGATGCACCGGCGCGTCTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTAtt < 2:6760804/101‑1 (MQ=21)
gcggcTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGc > 2:2237828/1‑101 (MQ=21)
ggcTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCAc < 2:8376505/101‑1 (MQ=21)
gcTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCAcc < 1:5566482/101‑1 (MQ=21)
tttGCCGCGCTGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGa < 2:898862/101‑1 (MQ=18)
tGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGaaa > 1:8630270/1‑101 (MQ=21)
tGCAGCGAGGCGCCGGGGCGAATGAGAGTGGAGCAGGAGTGCGCTGCCCCCCTC.TTTTG.GCT..GCGGGAAAATTCGCCCCCCGGCGTATTTGCACCAGGaaa < 2:7987612/101‑1 (MQ=12)
gCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGaaaa < 1:2834680/101‑1 (MQ=21)
cctgcaTGCCCCGGCGGTGCTGAGGGCGGGGCATGGGCGCTCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTTCCCCCCCGGCGTATTTGCACCAGGaaaaa < 1:4244462/96‑1 (MQ=9)
cgATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGcc < 1:6103679/101‑1 (MQ=21)
aTGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCg > 1:6414716/1‑101 (MQ=21)
aTGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCg > 2:4816615/1‑101 (MQ=21)
tGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCgg < 2:388182/101‑1 (MQ=21)
gCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGc > 1:669985/1‑101 (MQ=21)
gCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGc > 2:7600760/1‑101 (MQ=21)
aCCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGt > 2:7135625/1‑101 (MQ=21)
cgatctcgACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGtt < 1:403173/95‑1 (MQ=18)
ccGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGtt < 1:2153226/101‑1 (MQ=21)
cGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGttt > 2:1453528/1‑101 (MQ=21)
cGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGttt < 2:5440500/101‑1 (MQ=21)
ggCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGtttt < 2:6921449/101‑1 (MQ=21)
ggCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGtttt < 1:5319199/101‑1 (MQ=21)
ggCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGCCNNATNTGCACCAGGAAAAAGCCCGGCGtttt > 1:4558149/1‑101 (MQ=18)
cgcgACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTc < 1:3780138/101‑1 (MQ=21)
gcgACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTcc > 2:2777989/1‑101 (MQ=21)
gcgACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTcc < 1:1469244/101‑1 (MQ=21)
cTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGt > 2:4752186/1‑101 (MQ=21)
cTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGt < 1:6237732/101‑1 (MQ=21)
gAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCg > 1:7996015/1‑101 (MQ=21)
gAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCg > 2:2575940/1‑101 (MQ=21)
gggCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATACACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGaa < 1:1969777/101‑1 (MQ=21)
gCGGGGCCGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAAt < 2:7685817/101‑1 (MQ=21)
gCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGCAAt < 1:8812868/101‑1 (MQ=21)
cGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATa > 1:8504467/1‑101 (MQ=21)
ggggCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATAc > 2:556017/1‑101 (MQ=21)
gggCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACg < 2:5894269/101‑1 (MQ=21)
gggCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACg > 1:747450/1‑101 (MQ=21)
gggCAGGGGGGCGCTCCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCCCCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACg < 1:4369771/101‑1 (MQ=21)
ggCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGc > 2:7463629/1‑101 (MQ=21)
gCAGGGGGTCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGcc < 2:3175399/101‑1 (MQ=21)
gCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGcc > 2:6394148/1‑101 (MQ=21)
gCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCAGGCGTATTGGCACCAGGAAAAAGCCCGGCGGTTCTACTGGTCGACATAGGcc > 2:8579417/1‑101 (MQ=17)
aGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCgg > 1:3663202/1‑101 (MQ=25)
ggggggCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCggg > 1:5735476/1‑101 (MQ=25)
gggggCGCTGCCCCCCTCTTTTGG.GTGC.GC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCgggg > 2:4387889/1‑101 (MQ=25)
gggCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCgggggg < 1:4109746/101‑1 (MQ=25)
gcTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCAGCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTc > 1:4773161/1‑101 (MQ=37)
gcTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTc > 2:8792607/1‑101 (MQ=37)
cTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTcc < 1:3140487/101‑1 (MQ=37)
cTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTcc < 2:8504087/101‑1 (MQ=37)
cTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTcc > 2:2000619/1‑101 (MQ=37)
cTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTcc > 2:3011233/1‑101 (MQ=37)
cTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTcc < 2:3061526/101‑1 (MQ=37)
tGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCg < 2:8231379/101‑1 (MQ=37)
tGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCg > 1:1746566/1‑101 (MQ=37)
tGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCg < 2:4076661/101‑1 (MQ=37)
gCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGGGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGc > 1:6765574/1‑101 (MQ=25)
gCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGc > 2:5103819/1‑101 (MQ=37)
gCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGc > 1:2306351/1‑101 (MQ=37)
cccccTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCtt < 2:3453993/101‑1 (MQ=37)
cccccTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCtt < 1:2657020/101‑1 (MQ=37)
ccccTC.TTTTG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTg < 1:1126210/101‑1 (MQ=37)
cctcttttG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTGCg < 1:7056204/97‑1 (MQ=37)
cctcttttG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTGCg < 1:731627/97‑1 (MQ=37)
cctcttttG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTGCg < 1:3877349/97‑1 (MQ=37)
ctcttttG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTGCgg < 1:2237895/98‑1 (MQ=38)
ctcttttG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTGCgg < 1:3430453/98‑1 (MQ=38)
ctcttttG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTGCgg < 2:3856962/98‑1 (MQ=38)
ctcttttG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTGCgg > 1:10255/4‑101 (MQ=37)
tcttttG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCGCCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTGCGGa < 2:1586119/99‑1 (MQ=37)
cttttG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTGCGGAc < 1:7005944/100‑1 (MQ=255)
cttttG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTGCGGAc < 2:9056122/100‑1 (MQ=255)
ttttG.GCTGCGC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTGCGGACg < 1:1318594/101‑1 (MQ=255)
||
GGGCTGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTCTTTTTG.GCT..GC..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTGCGGACG > NC_014034/904834‑905025
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 39 ≤
ATCG
|