| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,395,547 | C→A | 7.0% | intergenic (+359/‑572) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,395,547 | 0 | C→A | 7.0% | 91.0 ‑0.4 0.0 | 625 | intergenic (+359/‑572) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (24/20): ref base (289/291): total (313/312) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.40e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 665 total aligned reads displayed.
CGGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCG > NC_014034/1395447‑1395647
|
cgGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGc < 2:6124818/101‑1 (MQ=255)
cgGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGc > 1:2618791/1‑101 (MQ=255)
gggggCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCt > 1:2490001/1‑101 (MQ=255)
ggCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.t < 2:5319858/101‑1 (MQ=255)
ggCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.t < 1:6865199/101‑1 (MQ=255)
cGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.Tcc < 2:3466314/101‑1 (MQ=255)
cGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.Tcc > 1:4746214/1‑101 (MQ=255)
gTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCa < 2:7411876/101‑1 (MQ=255)
gTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCa < 1:7901781/101‑1 (MQ=255)
tGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAg < 2:5174377/101‑1 (MQ=255)
ggATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGc < 1:1329052/101‑1 (MQ=255)
ggATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACATC.TCGGTGCCGTCCCTCG.TCCCGc > 1:873700/1‑101 (MQ=255)
gATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGcc > 2:8620030/1‑101 (MQ=255)
gAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.cc < 2:910809/101‑1 (MQ=255)
aaCATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.g > 1:168157/1‑101 (MQ=255)
cATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.Gcc > 2:2022417/1‑100 (MQ=255)
aTCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCtc < 2:5797300/101‑1 (MQ=255)
tttGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TGGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTcc > 1:6572113/1‑101 (MQ=255)
ggCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTccccc > 1:5322001/1‑101 (MQ=255)
gCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTcccccc < 1:2797691/101‑1 (MQ=255)
gCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTcccccc < 1:831375/101‑1 (MQ=255)
ggTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCcgc > 1:6151859/1‑101 (MQ=255)
gTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCcgcg > 1:7196538/1‑101 (MQ=255)
cGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCggg < 1:7726037/101‑1 (MQ=255)
gACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCgggg > 1:141549/1‑101 (MQ=255)
aGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCg > 1:450028/1‑101 (MQ=255)
gCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTg > 1:5107637/1‑101 (MQ=255)
ggcggctgcggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAA.AAGCCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTgg < 1:2198193/91‑1 (MQ=0)
cTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTgg < 1:3839996/101‑1 (MQ=255)
aaggccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTgg < 1:2912554/91‑1 (MQ=2)
aaggccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTgg > 2:6806090/11‑101 (MQ=2)
aggccggtggtCGCTCCCCCTGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGa < 1:5640027/92‑1 (MQ=0)
ggccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGAt < 2:3690671/93‑1 (MQ=2)
ggTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGAt > 2:7727392/1‑101 (MQ=255)
ggctgcggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAA.AAGCCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGCGGCGTGGATc > 1:7503487/8‑101 (MQ=0)
ctcgcacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATc < 2:3841601/94‑1 (MQ=2)
ctcgcacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:6490177/94‑1 (MQ=2)
atcccgcgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.GATGATCAAATCCGCA.ATCGGCCGG.GCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGAt < 2:4849076/94‑1 (MQ=0)
ataccgcgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.GATGATCAAATCCGCA.ATCGGCCGG.GCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGAt > 2:5040457/8‑101 (MQ=0)
ccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCg > 1:6783587/7‑101 (MQ=2)
ccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCg > 1:7666141/7‑101 (MQ=2)
cgcacgtggCTCCCCCCGGGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGa < 1:5869474/93‑1 (MQ=2)
cgcacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGa > 1:4033000/6‑101 (MQ=2)
aaCGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGa < 1:905733/101‑1 (MQ=255)
tgcggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAA.AAGCCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 2:658029/5‑101 (MQ=2)
tgcggtCGCTCCCCCCGCGGGGGCGGGGATCGAAACAAA.AAGCCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 1:930313/5‑101 (MQ=2)
ggtggccGCGCCCCCCGCGGGCGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 2:7576541/95‑1 (MQ=2)
aCGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 1:2353096/1‑101 (MQ=255)
cgcgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.GATGATCAAATCCGCA.ATCGGCCGG.GCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 2:4073892/98‑1 (MQ=2)
cacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 1:8131660/98‑1 (MQ=2)
cGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 1:8549270/101‑1 (MQ=255)
cGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 1:504094/1‑101 (MQ=255)
tggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAac > 1:4249799/3‑101 (MQ=2)
acgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAac < 2:3134892/99‑1 (MQ=2)
cgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGGGGATCGAAact > 1:112315/2‑100 (MQ=2)
gtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCG.GCA.ATCGGCCGG.GCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacg < 2:1869087/101‑2 (MQ=2)
gtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacca < 2:7112600/101‑1 (MQ=255)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccac > 1:7298447/1‑101 (MQ=255)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactat < 1:6040862/101‑4 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcg > 1:5409380/1‑97 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACAAA.AAGCCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccg > 2:1601022/1‑98 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACAAA.AAGCCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccg < 2:8977377/101‑4 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatg > 1:4399587/1‑97 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCt < 2:6242314/101‑1 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgg > 1:8641261/1‑96 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgc < 1:5537300/101‑6 (MQ=2)
cTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgct < 2:556544/101‑7 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgtgc > 2:8243296/1‑94 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACAAA.AAGCCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgcgg > 2:1787650/1‑95 (MQ=2)
ccccccGGGGGGGCGTGGATCGAAACAAA.AAGCCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAtccccgcggc < 2:5952817/101‑8 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGc > 2:2210904/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACAAA.AAGCCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgcggc < 1:3218659/101‑8 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgctgg > 2:143247/1‑93 (MQ=2)
cccccGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgctggc < 2:6492797/101‑10 (MQ=2)
ccccGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCgg < 1:3522388/101‑1 (MQ=255)
ccccGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgggcgcg > 2:8462096/1‑91 (MQ=2)
cgGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGt < 1:3966219/101‑1 (MQ=255)
gggCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGGTCGAAACCACCTTGCGGC.TTGGCAc > 2:4543237/1‑101 (MQ=255)
gggCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCAc < 1:3680966/101‑1 (MQ=255)
ggCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACt < 1:7599931/101‑1 (MQ=255)
gCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACtt < 2:2870238/101‑1 (MQ=255)
gCGTGGATCGAAACATC.TCGGTGCCGTCACTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACtt < 1:7963954/101‑1 (MQ=255)
ggTGGATCGAAACATC.CCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACttt < 2:786285/100‑1 (MQ=255)
tGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTGACTTTcc > 2:2964309/1‑100 (MQ=255)
tGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTcg > 2:7261399/1‑101 (MQ=255)
gATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGGGGA..TGTCACCTTcgccg > 2:8732183/1‑99 (MQ=38)
tCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCggg > 2:7974419/1‑101 (MQ=255)
gAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGc > 1:6294451/1‑101 (MQ=255)
aaCATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGa > 2:3974344/1‑101 (MQ=255)
aTC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGc < 2:1363474/101‑1 (MQ=255)
aTC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGc < 2:2711552/101‑1 (MQ=255)
c.tcGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGt > 1:4861963/1‑101 (MQ=255)
cGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTTGTC.CTTTCCGGGGGCGCAgggcgg > 2:4274490/1‑96 (MQ=25)
ggTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGc > 1:2031153/1‑101 (MQ=255)
gCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCCGA.TTGTCACTTTCGCGGGGCGAGGGGTccggcc > 1:8950354/1‑96 (MQ=37)
ccGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGCTccc < 1:1897454/101‑1 (MQ=255)
tCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGCTcccccc < 2:4742774/101‑1 (MQ=255)
gcGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGCTcccccc < 2:4414072/100‑1 (MQ=255)
gatcTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGCTcccccc < 1:3121553/98‑1 (MQ=255)
cGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCcg > 2:245200/1‑101 (MQ=255)
|
CGGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCG > NC_014034/1395447‑1395647
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|