| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,396,000 | C→G | 15.8% | intergenic (+812/‑119) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,396,000 | 0 | C→G | 15.8% | 197.6 ‑0.8 ‑0.3 | 500 | intergenic (+812/‑119) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (37/42): ref base (217/204): total (254/246) | ||||||||||
| Fisher's exact test strand distribution p-value = 4.64e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.78e-01 | ||||||||||
Only 100 of 530 total aligned reads displayed.
TCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGT > NC_014034/1395900‑1396100
|
cggtcaccaccGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGc > 2:737943/10‑101 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGccc < 1:1130103/101‑1 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGccc < 2:7897811/101‑1 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCt < 2:8415689/101‑1 (MQ=255)
tCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTc > 2:7525314/1‑101 (MQ=255)
cccccccGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTc < 1:7667943/100‑1 (MQ=255)
cccccccGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTc < 2:293056/100‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATc < 2:8805696/101‑1 (MQ=255)
ccGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATcc < 2:2677970/101‑1 (MQ=255)
ccGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATcc > 2:6502235/1‑101 (MQ=255)
gcgGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCcgc > 1:5892491/1‑101 (MQ=255)
gggggCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCgggc > 1:4006525/1‑101 (MQ=255)
gggggCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCgcgc > 2:6930532/1‑101 (MQ=255)
gggggCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCgcgc > 1:4703419/1‑101 (MQ=255)
ggggCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCt > 1:2898355/1‑101 (MQ=255)
ggggCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCt > 1:3362449/1‑101 (MQ=255)
gCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGc > 2:228622/1‑101 (MQ=255)
cGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGcc > 1:9124645/1‑101 (MQ=255)
cGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGcc < 1:6080178/101‑1 (MQ=255)
cGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGcc > 2:7727881/1‑101 (MQ=255)
gTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCt > 1:5284971/1‑101 (MQ=255)
ggATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCa < 1:857279/101‑1 (MQ=255)
ggATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCa > 2:2016841/1‑101 (MQ=255)
gATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCAc < 1:6761652/101‑1 (MQ=255)
gATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCAc < 1:4885652/101‑1 (MQ=255)
gAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCt < 1:6403429/101‑1 (MQ=255)
gAAACGATGCGTTCATGGCCTACGTCGGCCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCt > 1:6515640/1‑101 (MQ=255)
aaCGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.Gc > 2:4312820/1‑101 (MQ=255)
aCGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.Gc.c < 2:5284787/101‑1 (MQ=255)
cGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.cg < 2:5935060/101‑1 (MQ=255)
gCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTc < 1:2051942/101‑1 (MQ=255)
cGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCg > 1:7296722/1‑101 (MQ=255)
ttCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCt > 2:3124487/1‑101 (MQ=255)
cATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTcc < 2:4101956/101‑1 (MQ=255)
aTGACCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTGACGCCT.GC.CGC..GTCGCTccc > 1:7227486/1‑101 (MQ=255)
ggCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTccccc > 1:2623788/1‑101 (MQ=255)
cTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCcgc < 2:4645393/101‑1 (MQ=255)
cGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCggg > 2:4053518/1‑101 (MQ=255)
ggCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCgg > 2:3649714/1‑100 (MQ=255)
ggCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGt < 1:4966214/101‑1 (MQ=255)
ggCAGTGGACTGGTCGCTCCCCCCCCGGGGGCGGGGGACCGAAACCCCCCCTCG.TCCGCGGCTTCCTCACCCCTGGC.CCC..GCCCCCCCCCCCCCggggcgg > 1:3863660/1‑98 (MQ=255)
gCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTg < 1:6958066/101‑1 (MQ=255)
cAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTgg > 1:2363854/1‑101 (MQ=255)
tctgcgcggTCGCGCCCCCCGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGa < 2:3009688/94‑1 (MQ=2)
gTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGAt > 2:125178/1‑101 (MQ=255)
gTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GA.CGC..GTCGCTCCCCCCGCGGGGGCGTGGAt > 2:3197487/1‑101 (MQ=255)
tGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATc < 1:3595486/101‑1 (MQ=255)
tGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATc < 1:5159378/101‑1 (MQ=255)
tGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATc > 2:7956998/1‑101 (MQ=255)
gggACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATc < 1:1049657/100‑1 (MQ=255)
ctgcgcggTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:1685241/95‑1 (MQ=2)
tgcgcggTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATc > 2:4534696/6‑101 (MQ=2)
tgcgcggTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATc < 2:3481374/96‑1 (MQ=2)
cttGGTCGCTACCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 1:8099240/99‑1 (MQ=255)
gcggTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 2:356669/3‑101 (MQ=2)
cTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 2:6081721/1‑101 (MQ=255)
cTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 2:4796459/101‑1 (MQ=255)
tGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGaaag > 2:8098891/1‑100 (MQ=255)
tGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc < 1:877667/101‑1 (MQ=255)
gTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAct > 1:978268/1‑100 (MQ=2)
gTCGCGCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAg < 2:3774205/101‑1 (MQ=255)
tCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActt > 2:8296902/1‑99 (MQ=2)
cGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtg < 1:4279260/101‑4 (MQ=2)
cGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGgc > 2:8741892/1‑101 (MQ=255)
cGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGgc > 1:1896110/1‑101 (MQ=255)
gCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtga > 1:1417545/1‑97 (MQ=2)
gCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGCGGGCGTGGATCGAAACAGgcg > 2:4948237/1‑101 (MQ=255)
cTCCCCCCGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgat < 1:61432/101‑6 (MQ=2)
cTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGgcgc < 2:5232737/101‑1 (MQ=255)
tCCCCCCGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatg > 1:9026087/1‑95 (MQ=2)
cccccGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatgac < 1:6245237/101‑9 (MQ=2)
cccccGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatgac > 1:1480986/1‑93 (MQ=2)
cccccGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATc < 1:4404774/101‑1 (MQ=255)
ccccGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatgacc < 2:5508728/101‑10 (MQ=2)
ccGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGa < 2:5688203/101‑1 (MQ=255)
ccGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGa > 2:6195168/1‑101 (MQ=255)
cgGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGt > 1:8417623/1‑101 (MQ=255)
cgGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGt > 1:7805909/1‑101 (MQ=255)
gggggC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..TTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCCCATCTGATGta > 1:1286911/1‑101 (MQ=255)
gggggC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGta > 2:5366149/1‑101 (MQ=255)
gggggC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGta > 2:1814854/1‑101 (MQ=255)
ggggC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtat < 1:5581431/101‑1 (MQ=255)
gggC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTTCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtata > 1:8278466/1‑101 (MQ=255)
ggC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTatat > 2:336789/1‑101 (MQ=255)
ggcgtgatccGAACCTCCCACGCGGTCCGCGCTTGGCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTatat < 2:8519548/92‑1 (MQ=25)
gTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGcc < 2:5002235/101‑1 (MQ=255)
tGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGccc > 1:3013337/1‑101 (MQ=255)
ggATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCg < 2:1443563/101‑1 (MQ=255)
ggATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCg > 1:7525048/1‑101 (MQ=255)
aTCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCNANNNAGGCGCATCTGCTGTATATGCCCGGt > 1:1212440/1‑101 (MQ=255)
tCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTg > 2:1871955/1‑101 (MQ=255)
cGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTga > 1:5721678/1‑101 (MQ=255)
gAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTgag < 2:8990734/101‑1 (MQ=255)
gAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTgag > 2:6302377/1‑101 (MQ=255)
gAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTgag > 2:5150184/1‑101 (MQ=255)
accTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGAc < 2:673548/99‑1 (MQ=255)
aCTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACg < 1:278130/101‑1 (MQ=255)
cGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCt > 2:7143410/1‑101 (MQ=255)
cGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCt < 1:3197586/101‑1 (MQ=255)
gCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTg < 1:6643031/101‑1 (MQ=255)
|
TCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGT > NC_014034/1395900‑1396100
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|