| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,397,883 | C→A | 1.2% | intergenic (+187/+1711) | RCAP_rcc01307 → / ← RCAP_rcc01309 | hypothetical protein/IS66 family transposase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,397,883 | 0 | C→A | 1.2% | 3.3 ‑1.0 ‑0.0 | 417 | intergenic (+187/+1711) | RCAP_rcc01307/RCAP_rcc01309 | hypothetical protein/IS66 family transposase |
| Reads supporting (aligned to +/- strand): new base (1/4): ref base (188/224): total (189/228) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.83e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.23e-01 | ||||||||||
Only 100 of 486 total aligned reads displayed.
GGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCG > NC_014034/1397783‑1397983
|
ggCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGcccc < 2:5130632/101‑1 (MQ=255)
cGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCcccgc < 2:8587164/101‑1 (MQ=255)
gTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCcccgcc > 1:3819587/1‑101 (MQ=255)
tGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCcccgccc > 2:6693737/1‑101 (MQ=255)
tGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCcccgccc > 2:5051517/1‑101 (MQ=255)
ggATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCcccgcccg > 2:1550127/1‑101 (MQ=255)
aTCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCt > 1:4551718/1‑101 (MQ=255)
cGAAACGGTGTCCAGCGTCAGATGCAGCGGCGTCGAATGGACATGGCGCTCCCCCCGCGGGGGCGGGGACCGAGACCCGGGAGCTCGAGCcgcgccgggga > 2:4258437/1‑96 (MQ=255)
cGAAACGGTGTCCAGCGTCACATGCAGCGGCCTCGCATCGCCATGTCGCCCCCCCCGCGGGGGCGGGGGTCGACACGCGGCCCCTC.ACCAccccccgcggc > 1:2806520/1‑98 (MQ=255)
aaaCGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGtct > 1:4667987/1‑101 (MQ=255)
aaCGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGtctc < 1:8704678/101‑1 (MQ=255)
ggTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCAcc > 1:606277/1‑101 (MQ=255)
gtgtCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCa < 2:2113161/101‑1 (MQ=255)
gtgtCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCa > 2:7894662/1‑101 (MQ=255)
gtCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAAc < 1:151050/101‑1 (MQ=255)
gtCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAAc < 1:1037975/101‑1 (MQ=255)
cAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCACCCCCCGCGGGGGCGTGGATCGAAACCCGGCGCCTC.AGCCCCGCCCGCTGTCTCACCAACAGt < 2:4065681/101‑1 (MQ=255)
aGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTc < 1:3694926/101‑1 (MQ=255)
gTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCt > 1:7382780/1‑101 (MQ=255)
gTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCt < 2:4721914/101‑1 (MQ=255)
tCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.GGCCCCGCCCGCTGTCTCACCAACAGTCGCTc < 2:1403549/101‑1 (MQ=255)
tCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTc < 1:3063205/101‑1 (MQ=255)
tCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTc < 2:2999140/101‑1 (MQ=255)
acaTGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTTACCAACAGTCGCTacc > 2:7501923/1‑101 (MQ=255)
acaTGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTccc > 1:4366794/1‑101 (MQ=255)
acaTGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTccc < 1:123182/101‑1 (MQ=255)
acaTGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTccc < 2:8348369/101‑1 (MQ=255)
caTGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTcccc > 2:2661229/1‑101 (MQ=255)
caTGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTcccc > 2:584991/1‑101 (MQ=255)
caTGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTcccc > 2:7069457/1‑101 (MQ=255)
caTGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTcccc > 2:72698/1‑101 (MQ=255)
tGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTcccccc < 2:5334719/101‑1 (MQ=255)
tGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTcccccc > 2:3323678/1‑101 (MQ=255)
gCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCcg > 1:3271014/1‑101 (MQ=255)
gcggcgTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCgg < 2:547424/101‑1 (MQ=255)
cgTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGTATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGc < 1:5186153/101‑1 (MQ=255)
tCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGt < 1:3454879/101‑1 (MQ=255)
cGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTg < 1:1567453/101‑1 (MQ=255)
cGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTg > 2:9200098/1‑101 (MQ=255)
gCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTgg > 1:684380/1‑101 (MQ=255)
cATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGa < 2:2462463/101‑1 (MQ=255)
aTCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCCCCGGGGCGTgggt > 2:5763913/1‑99 (MQ=255)
aTCGCCATGTCGCTCCCCCCGCGGGGGCGTGGAGCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGAt > 1:6456042/1‑101 (MQ=255)
tCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:6928065/101‑1 (MQ=255)
tCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATc > 2:2316893/1‑101 (MQ=255)
tCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATc < 2:822167/101‑1 (MQ=255)
cGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:6201132/101‑1 (MQ=255)
cGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:8501528/101‑1 (MQ=255)
gCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGa < 1:7064791/101‑1 (MQ=255)
ccATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 1:2103676/1‑101 (MQ=255)
aTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc < 2:3524630/101‑1 (MQ=255)
aTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc < 2:9027780/101‑1 (MQ=255)
agTCGCGCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAct < 2:2526708/100‑1 (MQ=255)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActc > 2:1764683/1‑101 (MQ=255)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActct < 1:5670831/101‑1 (MQ=255)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActct > 2:8802439/1‑101 (MQ=255)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTa < 2:6552262/101‑1 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTAt < 1:9172171/101‑1 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTAt < 1:4744252/101‑1 (MQ=255)
tCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGGGTGGATCGAAACTCTATgg > 2:2250440/1‑101 (MQ=255)
cccccccGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgg < 2:6437454/100‑1 (MQ=255)
cccGCGGGGGCGTGGATCGACACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCTAAACTCTATggtagg < 1:7235404/101‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggagg < 2:1197381/101‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggagg < 2:4333387/101‑1 (MQ=255)
cgcgGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggct < 2:3050326/101‑1 (MQ=255)
gggggCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctagg < 1:4873141/101‑1 (MQ=255)
ggggCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctaggg < 1:5552047/101‑1 (MQ=255)
gggCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctaggga > 2:6326726/1‑101 (MQ=255)
gggCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctaggga > 2:1957973/1‑101 (MQ=255)
gggCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctaggga < 2:2773200/101‑1 (MQ=255)
gTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctagggaggct < 2:1316266/101‑1 (MQ=255)
gTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctagggaggct < 2:8079631/101‑1 (MQ=255)
gTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctagggaggct > 1:7739620/1‑101 (MQ=255)
tGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctagggaggcta > 1:2202/1‑101 (MQ=255)
tGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctagggaggcta < 2:3753352/101‑1 (MQ=255)
tGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctagggaggcta > 1:5776834/1‑101 (MQ=255)
ggATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTAc < 1:2380000/101‑1 (MQ=255)
ggATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTAc > 1:902834/1‑101 (MQ=255)
ggATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTAc < 1:7894995/101‑1 (MQ=255)
cGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCAc < 2:5606261/101‑1 (MQ=255)
gAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGGGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCAcc < 1:7465070/101‑1 (MQ=255)
aaaCCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCt > 1:423480/1‑101 (MQ=255)
aaaCCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCt < 2:7676679/101‑1 (MQ=255)
accgcgCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTc < 2:7579396/96‑1 (MQ=255)
aCCCGGCACCTC.AGCCCCGCCCACTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTc < 1:8296454/101‑1 (MQ=255)
cccGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCa < 1:8170461/101‑1 (MQ=255)
ccGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCaa < 1:2720560/101‑1 (MQ=255)
ccGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCaa > 2:6193141/1‑101 (MQ=255)
cGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCaaa < 2:4575106/101‑1 (MQ=255)
ggCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCaaaa < 2:4872547/101‑1 (MQ=255)
gCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAg < 2:4460628/101‑1 (MQ=255)
cACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGt > 1:5052723/1‑101 (MQ=255)
cACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGt > 1:8379744/1‑101 (MQ=255)
c.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTc > 1:2554180/1‑101 (MQ=255)
aGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTcc > 1:2020364/1‑101 (MQ=255)
cccgcccgCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTccccc < 1:1345849/101‑1 (MQ=255)
cccgcccgCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTccccc < 2:6937207/101‑1 (MQ=255)
ccgcccgcTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTcccccc < 1:1788070/101‑1 (MQ=255)
ccgcccgcTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTcccccc > 1:3941446/1‑101 (MQ=255)
cgcccgcTGTCTCACCAACAGTCGCTCCCCCCGCGGGGTCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAACTCGCTCCCCCcg < 1:6568569/101‑1 (MQ=255)
|
GGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCACCTC.AGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCG > NC_014034/1397783‑1397983
Base quality scores:
ATCG
< 3 ≤
ATCG
< 22 ≤
ATCG
< 30 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|