Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 1,434,386 | C→A | 20.4% | intergenic (‑165/‑793) | RCAP_rcc01334 ← / → RCAP_rcc01335 | hypothetical protein/Fis family GAF modulated sigma54 specific transcriptional regulator |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 1,434,386 | 0 | C→A | 20.4% | 300.2 0.0 0.0 | 534 | intergenic (‑165/‑793) | RCAP_rcc01334/RCAP_rcc01335 | hypothetical protein/Fis family GAF modulated sigma54 specific transcriptional regulator |
Reads supporting (aligned to +/- strand): new base (51/58): ref base (198/227): total (249/285) | ||||||||||
Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 |
Only 100 of 579 total aligned reads displayed.
GTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCT > NC_014034/1434286‑1434486
|
gTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..Gtctc < 1:6979202/101‑1 (MQ=255)
tataTGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTcc < 1:1755017/101‑1 (MQ=255)
atatGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCg > 1:5782060/1‑101 (MQ=255)
atatGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GGCTCCg > 2:1425957/1‑101 (MQ=255)
atGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGct < 1:4695790/101‑1 (MQ=255)
tGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGctc > 1:1143794/1‑101 (MQ=255)
tGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGctc > 1:1576154/1‑101 (MQ=255)
tGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGctc > 1:682962/1‑101 (MQ=255)
gCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGctct < 1:848547/101‑1 (MQ=255)
cGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCtt < 1:9049247/101‑1 (MQ=255)
cGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCtt < 2:6712086/101‑1 (MQ=255)
gCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTc < 2:712647/101‑1 (MQ=255)
gCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTCCTTc > 2:5823208/1‑101 (MQ=255)
ttACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCAc < 1:4828454/101‑1 (MQ=255)
tACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACg < 1:8741047/101‑1 (MQ=255)
aCCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACg.g < 2:5000470/101‑1 (MQ=255)
cGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCt > 1:6301398/1‑101 (MQ=255)
ggATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCTCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.g > 1:3371110/1‑101 (MQ=255)
ggATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.g < 2:3756836/101‑1 (MQ=255)
aTCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTc < 2:3687396/101‑1 (MQ=255)
tCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCa < 1:4037232/101‑1 (MQ=255)
cGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCaa > 2:1041980/1‑101 (MQ=255)
gAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAAc > 2:8528440/1‑101 (MQ=255)
gAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAAc < 2:7940092/101‑1 (MQ=255)
aaaCAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGAT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAAcc > 2:6086804/1‑101 (MQ=255)
aCAGGCTGCTTTGGGCGGAACCCCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCtt < 2:1628571/101‑1 (MQ=255)
aCAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCtt < 2:9149676/101‑1 (MQ=255)
aCAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGGCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCCCG.GCTGC.GTCAACCtt > 1:6568961/1‑101 (MQ=255)
gctgctTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCg < 1:5649584/101‑1 (MQ=255)
tgctTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCt < 2:2307424/101‑1 (MQ=255)
tgctTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCt < 2:4574614/101‑1 (MQ=255)
tgcgtggggCGGAACACCTGATCCTGCTGGGTCCCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCt < 2:7515828/95‑1 (MQ=255)
tGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTccccc < 2:6974644/101‑1 (MQ=255)
aaCACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCgggg < 1:5103982/101‑1 (MQ=255)
cacCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGc < 2:7241718/101‑1 (MQ=255)
cTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTg > 2:6222430/1‑101 (MQ=255)
cTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTg < 2:5379915/101‑1 (MQ=255)
tGATCCTGCTGGGTCGCTCCCCCCCCCGGGGGGGGGGATCGAACC..GCCTCCGCTCTGCTT.ACC.GCCGCGGTCACCCTTGTCGCTCCCCCCCCGGGGGCggg > 2:1141811/1‑99 (MQ=255)
tGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTgg > 1:7167006/1‑101 (MQ=255)
gcgggctatcgTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGG.ATCTGCGGCGTCGCTCCCCCCGCGGGGGCGTg > 1:4549741/11‑101 (MQ=2)
aTCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGac > 2:225014/1‑100 (MQ=255)
aTCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGAt < 2:302348/101‑1 (MQ=255)
aTCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:3032801/101‑1 (MQ=255)
tCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:2474972/101‑1 (MQ=255)
tCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:2666743/101‑1 (MQ=255)
ccTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:4491071/101‑1 (MQ=255)
ccTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:4788773/101‑1 (MQ=255)
ccTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:3796571/101‑1 (MQ=255)
ccTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:2689756/101‑1 (MQ=255)
ggctatcgTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGG.ATCTGCGGCGTCGCTCCCCCCGCGGGGGCGTGGAt > 2:4926267/8‑101 (MQ=2)
ggctatcgTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGG.ATCTGCGGCGTCGCTCCCCCCGCGGGGGCGTGGAt < 2:6010675/94‑1 (MQ=2)
ctgctgGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGa > 1:4433366/1‑101 (MQ=255)
gctatcgTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGG.ATCTGCGGCGTCGCTCCCCCCGCGGGGGCGTGGATc > 1:2038027/7‑101 (MQ=2)
gctatcgTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGG.ATCTGCGGCGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:3269516/95‑1 (MQ=2)
ctatcgTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGG.ATCTGCGGCGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:1800390/96‑1 (MQ=2)
gatcttCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAac < 1:8201281/96‑1 (MQ=255)
ctgGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAac > 2:7609350/1‑101 (MQ=255)
tgGGTCGCT.CCCCCCGCGGGGGCGTGGATCGACAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaca < 2:6752980/101‑1 (MQ=255)
tcgTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGG.ATCTGCGGCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 1:3545041/99‑1 (MQ=2)
gggTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacac < 1:5887868/101‑1 (MQ=255)
ggTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACg < 2:5517771/101‑1 (MQ=255)
ggTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACg < 2:7847782/101‑1 (MQ=255)
cgTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGG.ATCTGCGGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAac > 1:7677790/2‑101 (MQ=2)
cgTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGG.ATCTGCGGCGTCGCTCCCCCCGCGGGGGCGGGGATCGAAac > 2:6381122/2‑101 (MQ=2)
gTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGG.ATCTGCGGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacg > 1:5303036/1‑100 (MQ=2)
gTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACgg < 1:6222669/101‑1 (MQ=255)
gTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACgg < 1:7824828/101‑1 (MQ=255)
tCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacagatc > 2:8200932/1‑97 (MQ=255)
cGCT.CCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGG.ATCTGCGGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacgct < 1:7530842/101‑4 (MQ=2)
gCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGAtt < 2:1530220/101‑1 (MQ=255)
cT.CCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGG.ATCTGCGGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacgctgc > 2:4191838/1‑96 (MQ=2)
cT.CCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGG.ATCTGCGGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacgctgc > 2:188997/1‑96 (MQ=2)
t.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGc > 2:3326647/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGG.ATCTGCGGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacgctgctg > 1:8569130/1‑94 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCa > 1:9128754/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCa > 2:2358207/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCa > 1:7881878/1‑101 (MQ=255)
cccccGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCAt < 2:2895605/101‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGG.ATCTGCGGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacgctgctgaca < 2:837130/101‑11 (MQ=0)
cccGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATgg < 2:5292689/101‑1 (MQ=255)
ccGCGGGGGCGTGGATCGAAAC..GGCTCCGCTCTGCTTCACG.GCTGC.GGCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGgc < 2:9000106/101‑1 (MQ=255)
gggGGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAg > 1:8805415/1‑101 (MQ=255)
gggCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAg > 1:7367438/1‑101 (MQ=255)
gggCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAg < 2:5675891/101‑1 (MQ=255)
ggCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAgg < 1:5414358/101‑1 (MQ=255)
gCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAggg < 2:3954443/101‑1 (MQ=255)
tGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACa > 1:414131/1‑101 (MQ=255)
ggATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAg < 1:604482/101‑1 (MQ=255)
ggATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCCCGGCGGCGTGGATCGAAACACTGAGTGCATGGCGCGGGGGGGCAg > 1:1404722/1‑101 (MQ=25)
aTCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGc > 1:2245958/1‑101 (MQ=255)
cGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCtt > 1:1968616/1‑101 (MQ=255)
cGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCtt > 1:107803/1‑101 (MQ=255)
gAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCttt < 2:2103229/101‑1 (MQ=255)
aaaC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTg < 1:79879/101‑1 (MQ=255)
aaaC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTg > 1:6346989/1‑101 (MQ=255)
aaaC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTg > 2:3225394/1‑101 (MQ=255)
aaC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGc < 2:8805010/101‑1 (MQ=255)
gTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGt < 2:352748/101‑1 (MQ=255)
gTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGt < 2:4445949/101‑1 (MQ=255)
tctcCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTc > 2:6479084/1‑101 (MQ=255)
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GTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGC.GTCAACCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCT > NC_014034/1434286‑1434486
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 23 ≤
ATCG
< 31 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|