| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,434,405 | C→G | 20.9% | intergenic (‑184/‑774) | RCAP_rcc01334 ← / → RCAP_rcc01335 | hypothetical protein/Fis family GAF modulated sigma54 specific transcriptional regulator |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,434,405 | 0 | C→G | 20.9% | 289.0 ‑0.8 ‑0.3 | 522 | intergenic (‑184/‑774) | RCAP_rcc01334/RCAP_rcc01335 | hypothetical protein/Fis family GAF modulated sigma54 specific transcriptional regulator |
| Reads supporting (aligned to +/- strand): new base (51/58): ref base (176/237): total (227/295) | ||||||||||
| Fisher's exact test strand distribution p-value = 4.49e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.35e-01 | ||||||||||
Only 100 of 540 total aligned reads displayed.
TGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGCGTGGA > NC_014034/1434305‑1434505
|
ggATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCg < 1:7870985/101‑1 (MQ=255)
aaCAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAATC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCt < 1:6463448/101‑1 (MQ=255)
aaCAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCt > 1:4427476/1‑101 (MQ=255)
aCAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCtt < 2:7867632/101‑1 (MQ=255)
aCAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCtt < 2:7570654/101‑1 (MQ=255)
aCAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGCCGCTCCCCCCGCGGCGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCtt > 1:9000528/1‑101 (MQ=255)
cAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..g < 1:1976671/101‑1 (MQ=255)
aGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..Gt < 1:4530900/101‑1 (MQ=255)
ctTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTcc > 2:4867871/1‑101 (MQ=255)
ctTTAGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTcc < 2:7979285/101‑1 (MQ=255)
tttGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTccc < 1:8345691/101‑1 (MQ=255)
ttGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTcccc < 2:8429031/101‑1 (MQ=255)
cacCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGc < 1:1370762/101‑1 (MQ=255)
ccTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGt < 2:526765/101‑1 (MQ=255)
ccTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGt < 1:4489361/101‑1 (MQ=255)
ccTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGt < 2:40850/101‑1 (MQ=255)
cTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTg > 2:6222430/1‑101 (MQ=255)
tGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTgg > 1:7167006/1‑101 (MQ=255)
tGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTCCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTgg > 2:2589427/1‑101 (MQ=255)
tCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATc > 2:1898524/1‑101 (MQ=255)
cgggctatcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGG..TCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GTCGCTCCCCCCGCGGGGGCGTgg < 1:1142919/92‑1 (MQ=2)
cgggctatcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGG..TCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GTCGCTCCCCCCGCGGGGGCGTgg < 1:5837120/92‑1 (MQ=2)
gggctatcgTCGCTCCCCCCGCGGGAGCGTTGATCGAAACGGG..TCGAAGACCTGCTTGACGCGCTGGGTCTGCGGC..GTCGCTCCCCCCGCGGGGGCGTGGa < 2:3265979/93‑1 (MQ=2)
ccTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGCTCg > 2:3744877/1‑101 (MQ=255)
ccTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:3858817/101‑1 (MQ=255)
ccTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:2195447/101‑1 (MQ=255)
ggctatcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGG..TCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GTCGCTCCCCCCGCGGGGGCGTGGAt < 2:6475276/94‑1 (MQ=2)
ggctatcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGG..TCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GTCGCTCCCCCCGCGGGGGCGTGGAt < 1:5524151/94‑1 (MQ=2)
ggctatcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGG..TCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GTCGCTCCCCCCGCGGGGGCGTGGAt < 2:6067518/94‑1 (MQ=2)
ggctagcgTCGCTCCCCCCGCGGCGGCGTGGATCGAAACGGG..TCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GTCGCTCCCCCCGCGGGGGCGTGGAt < 2:2935419/94‑1 (MQ=2)
ctgctgGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGa > 2:9182526/1‑101 (MQ=255)
tgctgGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 2:5377689/1‑101 (MQ=255)
tgctgGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 1:5676098/1‑101 (MQ=255)
gctatcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGG..TCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GTCGCTCCCCCCGCGGGGGCGTGGATc > 1:2038027/7‑101 (MQ=2)
ctatcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGG..TCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GTCGCTCCCCCCGCGGGGGCGTGGATCg > 2:5668430/6‑101 (MQ=2)
ctatcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGG..TCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:178397/96‑1 (MQ=2)
gatcttCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAac < 1:8201281/96‑1 (MQ=255)
ctgGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAac < 1:1592449/101‑1 (MQ=255)
ctgGGTCGCTCCCCCCGCGGCGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGCAac < 1:8820748/101‑1 (MQ=255)
tgGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAaca > 1:3307249/1‑101 (MQ=255)
atcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGG..TCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GTCGCTCCCCCCGCGGGGGCGGGGATCGaa > 2:1729205/4‑101 (MQ=2)
ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACg < 2:5517771/101‑1 (MQ=255)
cgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGG..TCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAac > 2:6349878/2‑101 (MQ=2)
cgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GGTTCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAac < 2:3947337/100‑1 (MQ=2)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGG..TCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAacg > 1:5303036/1‑100 (MQ=2)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACgg < 2:1148668/101‑1 (MQ=255)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGG..TCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAacgc < 2:2737897/101‑3 (MQ=2)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCCACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGa < 2:4427349/101‑1 (MQ=255)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACGGG..TCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAacgct > 1:6971326/1‑98 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGAt > 2:460174/1‑101 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGAtt < 2:1530220/101‑1 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGAtt < 1:4052469/101‑1 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGCTTg > 2:7291494/1‑101 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTg > 1:7614744/1‑101 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTg < 2:7166702/101‑1 (MQ=255)
cTCCCCCAGCGGGGGCGTGGATCGAAACGGG..TCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAacgctgc > 2:3633396/1‑96 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGc > 1:4913538/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACGGG..TCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAacgctgctg > 2:2338575/1‑94 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACGGG..TCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAacgctgctg < 2:3140834/101‑8 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCa > 1:9128754/1‑101 (MQ=255)
ccccGCGGGGGCGTGGATCGAAAC..T..TGTCTGACGCGCTCATCA.GC.ACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCggcaaggac < 2:888062/101‑8 (MQ=37)
ccccGCGGGGGCGTGGATCGAAAC..T..TGTCTGACGCGCTCATCA.GC.ACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCggcaaggac > 2:7049686/1‑94 (MQ=37)
cccGCGGGGGCGTGGATCGAAACGGG..TCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAacgctgctgaca < 1:3693557/101‑11 (MQ=0)
cccGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATgg < 1:6087041/101‑1 (MQ=255)
gcgGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGgcgc > 2:5883562/1‑101 (MQ=255)
cgGGGGCGTGGATCGAAGC..G..TCTGCGCTCTGCTTCACG.GGTGCGTCCACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGcc < 2:1091079/101‑1 (MQ=21)
cgGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGcc < 2:1831073/101‑1 (MQ=255)
gggggCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGTGGTGGATCGAAACACGGATTGCATgggtccg > 1:7691344/1‑96 (MQ=255)
gggggCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCg < 2:3455424/101‑1 (MQ=255)
gggggCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCg > 1:8750597/1‑101 (MQ=255)
gggggCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCg > 1:5147426/1‑101 (MQ=255)
gggCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAg < 1:8528825/101‑1 (MQ=255)
gggCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAg > 1:7487776/1‑101 (MQ=255)
gggCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAg > 1:7367438/1‑101 (MQ=255)
gTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGAc < 2:4965219/101‑1 (MQ=255)
tGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACa < 1:3171976/101‑1 (MQ=255)
tGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACa > 1:414131/1‑101 (MQ=255)
ggATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAg > 1:6695722/1‑101 (MQ=255)
aTCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGc > 1:2245958/1‑101 (MQ=255)
cGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCtt > 1:6277393/1‑101 (MQ=255)
cGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCtt < 2:9048746/101‑1 (MQ=255)
gAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCttt > 2:2118679/1‑101 (MQ=255)
aaaC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTg < 2:6924661/101‑1 (MQ=255)
aaaC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTg < 1:79879/101‑1 (MQ=255)
aaC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGc > 1:2610157/1‑101 (MQ=255)
aC..G..ACTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCATTGcg > 2:823431/1‑100 (MQ=255)
c..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACAGATTGCATGGCGCCGAGGGACAGGCTTTGCAg > 2:6750936/1‑101 (MQ=255)
g..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGt > 1:6008392/1‑101 (MQ=255)
tctcCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTc < 1:4806477/101‑1 (MQ=255)
tctcCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTc < 2:22564/101‑1 (MQ=255)
gCTCTGCTTCAAG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTcc < 2:765171/101‑1 (MQ=255)
tctGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTcccc > 1:2836979/1‑101 (MQ=255)
tctGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTcccc < 2:4534157/101‑1 (MQ=255)
ctGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTccccc < 2:8570103/101‑1 (MQ=255)
tGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTcccccc < 2:1429836/101‑1 (MQ=255)
tGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTcccccc > 1:632138/1‑101 (MQ=255)
ttCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCcgcg > 2:8771545/1‑101 (MQ=255)
g.gCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCgggggg > 2:6579646/1‑100 (MQ=255)
g.gCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGc < 1:1055972/101‑1 (MQ=40)
tGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGCGTg < 1:343562/101‑1 (MQ=38)
|
TGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..G..TCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGCGTGGA > NC_014034/1434305‑1434505
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 40 ≤
ATCG
|