| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,434,412 | C→G | 20.9% | intergenic (‑191/‑767) | RCAP_rcc01334 ← / → RCAP_rcc01335 | hypothetical protein/Fis family GAF modulated sigma54 specific transcriptional regulator |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,434,412 | 0 | C→G | 20.9% | 271.5 ‑0.8 0.0 | 521 | intergenic (‑191/‑767) | RCAP_rcc01334/RCAP_rcc01335 | hypothetical protein/Fis family GAF modulated sigma54 specific transcriptional regulator |
| Reads supporting (aligned to +/- strand): new base (50/58): ref base (171/236): total (224/297) | ||||||||||
| Fisher's exact test strand distribution p-value = 4.45e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 535 total aligned reads displayed.
AAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAA > NC_014034/1434312‑1434510
|
aCAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGGCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCCCG.GCTGCGTCAACCtt > 1:6568961/1‑101 (MQ=255)
cAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..g < 1:1976671/101‑1 (MQ=255)
aGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..Gt < 1:4530900/101‑1 (MQ=255)
tgctTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCt < 2:4574614/101‑1 (MQ=255)
gctTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTc > 2:7051810/1‑101 (MQ=255)
gggCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTcccccc < 1:5766408/101‑1 (MQ=255)
ggCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCcg < 2:3967990/101‑1 (MQ=255)
cGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCcccg > 2:1318303/1‑101 (MQ=255)
gAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCggg > 1:9083024/1‑101 (MQ=255)
cacCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGc < 1:1370762/101‑1 (MQ=255)
acCAGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCggggggg > 1:7213238/1‑99 (MQ=255)
aTCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGAt > 2:1912120/1‑101 (MQ=255)
tCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATc < 1:5893786/101‑1 (MQ=255)
cgggctatcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GT.CGCTCCCCCCGCGGGGGCGTgg < 1:1142919/92‑1 (MQ=2)
cgggctatcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GT.CGCTCCCCCCGCGGGGGCGTgg < 2:3512227/92‑1 (MQ=2)
cgggctatcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GT.CGCTCCCCCCGCGGGGGCGTgg < 2:2351921/92‑1 (MQ=2)
ccTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCg < 1:4335561/101‑1 (MQ=255)
ccTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCg < 1:3858817/101‑1 (MQ=255)
ccTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCg < 2:4788773/101‑1 (MQ=255)
ggctatcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GT.CGCTCCCCCCGCGGGGGCGTGGAt < 2:6067518/94‑1 (MQ=2)
ggctatcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GT.CGCTCCCCCCGCGGGGGCGTGGAt > 2:4926267/8‑101 (MQ=2)
ggctatcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GT.CGCTCCCCCCGCGGGGGCGTGGAt < 1:5524151/94‑1 (MQ=2)
ctgctgGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGa > 2:9182526/1‑101 (MQ=255)
ctgctgGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCCCGGGGGGCTGGATCGa > 2:5422294/1‑101 (MQ=255)
gctatcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GT.CGCTCCCCCCGCGGGGGCGTGGGTc > 1:4488511/7‑101 (MQ=2)
ctatcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GT.CGCTCCCCCCGCGGGGGCGTGGATCg < 1:178397/96‑1 (MQ=2)
tatcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GT.CGCTCCCCCCGCGGGGGCGTGGATCGa < 1:8486400/97‑1 (MQ=2)
gatcttCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAac < 1:8201281/96‑1 (MQ=255)
ctgGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAac < 1:1592449/101‑1 (MQ=255)
ctgGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAac < 1:4761698/101‑1 (MQ=255)
tgGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAaca > 1:3307249/1‑101 (MQ=255)
tgGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAaca < 1:2631443/101‑1 (MQ=255)
atcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GT.CGCTCCCCCCGCGGGGGCGTGGATCGaa > 1:2309858/4‑101 (MQ=2)
tcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GT.CGCTCCCCCCGCGGGGGCGTGGATCGaaa < 2:184020/99‑1 (MQ=2)
gggTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAacac < 1:6925140/101‑1 (MQ=255)
gggTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAacac < 2:5156404/101‑1 (MQ=255)
cgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAac > 2:6349877/2‑101 (MQ=2)
cgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GT.CGCTCCCCCCGCGGGGGCGGGGATCGAAac > 2:2982106/2‑101 (MQ=2)
cgTCGCGCCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAac < 2:6537707/100‑1 (MQ=2)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGa > 2:6131633/1‑101 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGAtt < 2:8781499/101‑1 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGAtt < 2:5664748/101‑1 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGAtt > 2:79879/1‑101 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAacgctgc > 2:4191838/1‑96 (MQ=2)
cTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGCTTg > 2:7291494/1‑101 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTg > 1:7614744/1‑101 (MQ=255)
cTCCCCCAGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAacgctgc > 2:3633396/1‑96 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAacgctgct > 1:5266945/1‑95 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTgt > 2:3157882/1‑100 (MQ=255)
tCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGc > 1:4913538/1‑101 (MQ=255)
tCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGc > 2:3283867/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAacgctgctg > 2:2698435/1‑94 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAacgctgctg < 2:5301059/101‑8 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAacgctgctg < 1:3490039/101‑8 (MQ=2)
cccccGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAacgctgctga < 1:6024221/101‑9 (MQ=2)
cccccGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCAt < 2:8590553/101‑1 (MQ=255)
ccccGCGGGGGCGTGGATCGAAAC..TTGTCTGACGCGCTCATCA.GC.ACGTCAAGATTCAGT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACTCggcaaggac > 2:720983/1‑94 (MQ=37)
ccccGCGGGGGCGTGGATCGAAAC..TTGTCTGACGCGCTCATCA.GC.ACGTCAAGATTCAGT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACTCggcaacgac < 1:8791791/101‑8 (MQ=37)
cccGCGGGGGCGTTGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATgg < 2:7853303/101‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAACGGGTCGAAGACCTGCTTGACGCGCTGGATCTGCGGC..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAacgctgctgcca > 2:230445/1‑91 (MQ=0)
cgGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGcc < 1:3702824/101‑1 (MQ=255)
cgGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGcc > 2:5806103/1‑101 (MQ=255)
gggggCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCg > 2:1055954/1‑101 (MQ=255)
gggggCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCg > 1:5147426/1‑101 (MQ=255)
ggggCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACGCGGATTGCATGGCGCCGa > 1:6195534/1‑101 (MQ=255)
gggCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAg > 1:7487776/1‑101 (MQ=255)
ggCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.TGCTCCCCCCGCGGGGGCGTCGATCGAAACACGGATTGCATGGCGCCGAgg > 2:1599192/1‑101 (MQ=255)
tGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACa < 1:3171976/101‑1 (MQ=255)
tGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACa < 2:6752850/101‑1 (MQ=255)
ggATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAg > 2:4482443/1‑101 (MQ=255)
cGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCtt < 2:9048746/101‑1 (MQ=255)
cGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCtt < 2:287973/101‑1 (MQ=255)
gAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCttt < 2:3895339/101‑1 (MQ=255)
gAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCttt > 2:1476317/1‑101 (MQ=255)
gAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCttt > 1:6301726/1‑101 (MQ=255)
gAAAC..GGCTCCGCTCTTCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCttt < 1:8696868/101‑1 (MQ=255)
gAAAC..GGCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCttt < 2:1110265/101‑1 (MQ=255)
aaaC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTg < 1:79879/101‑1 (MQ=255)
aaaC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTg < 2:6924661/101‑1 (MQ=255)
aaaC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTg > 1:6346989/1‑101 (MQ=255)
aaC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGc > 1:7878248/1‑101 (MQ=255)
aC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCa < 1:7062775/101‑1 (MQ=255)
aC..GACTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCATTGcg > 2:823431/1‑100 (MQ=255)
gTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCtttagatc > 2:84865/1‑96 (MQ=255)
tctcCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTc < 1:4099684/101‑1 (MQ=255)
tctcCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTc < 2:6464249/101‑1 (MQ=255)
cGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTc < 2:8890638/101‑1 (MQ=255)
ctctGCTTCACG.GCTGCGTCAACCTT..GTCCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTcc < 1:8941057/101‑1 (MQ=255)
ctctGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTccc < 1:7689059/101‑1 (MQ=255)
tCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCgg > 2:7638701/1‑101 (MQ=255)
cG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCggggg > 2:2142165/1‑101 (MQ=255)
g.gCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGc > 1:2090193/1‑101 (MQ=40)
g.gCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGc < 1:1055972/101‑1 (MQ=40)
gCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGCg > 2:173650/1‑101 (MQ=40)
gCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGCg > 2:220581/1‑101 (MQ=40)
cGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGCCAGGCTTGGCAGTCGCTCCCCCCGCGGGGGCGTGGa > 1:2963334/1‑101 (MQ=255)
tCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGCGTGGATc < 2:7575545/101‑1 (MQ=33)
tCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:8314662/101‑1 (MQ=33)
aaCCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGCGCAGATcct < 2:6669412/101‑3 (MQ=9)
aCCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 1:5663519/1‑101 (MQ=11)
|
AAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GTCTCCGCTCTGCTTCACG.GCTGCGTCAACCTT..GT.CGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAA > NC_014034/1434312‑1434510
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 40 ≤
ATCG
|