| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,732,849 | C→G | 10.9% | intergenic (‑273/‑130) | RCAP_rcc01601 ← / → tgt | FeS assembly SUF system protein/queuine tRNA‑ribosyltransferase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,732,849 | 0 | C→G | 10.9% | 8.2 ‑3.3 0.0 | 119 | intergenic (‑273/‑130) | RCAP_rcc01601/tgt | FeS assembly SUF system protein/queuine tRNA‑ribosyltransferase |
| Reads supporting (aligned to +/- strand): new base (0/15): ref base (25/79): total (25/94) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.85e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 177 total aligned reads displayed.
AGCGGGACCAGGCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAG...CCCCCC....GT...C...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCG > NC_014034/1732749‑1732946
|
aGCGGGACCAGGCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGTCCCCGCTTTTCCTAGGCAAAATTCGCCCTTCTTTCTTTTCGGGGGGGc < 1:7478921/101‑1 (MQ=255)
aGCGGGACCAGGCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGc > 2:1434184/1‑101 (MQ=255)
aGCGGGACCAGGCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGc > 1:2704042/1‑101 (MQ=255)
cGGGACCAGGCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCgg > 2:4139111/1‑101 (MQ=255)
gggACCAGGCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCggg > 2:6382522/1‑101 (MQ=255)
ggACCAGGCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCgggg < 2:3103910/101‑1 (MQ=255)
ggACCAGGCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCgggg > 2:6927303/1‑101 (MQ=255)
gcccAGGCCACGCTGCAGGCGCAGGCCGGCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCggggg < 2:7347126/99‑1 (MQ=255)
gACCAGGCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCggggg > 2:400595/1‑101 (MQ=255)
gACCAGGCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCggggg < 1:4200564/101‑1 (MQ=255)
gACCAGGCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCggggg > 1:2176688/1‑101 (MQ=255)
gACCAGGCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCggggg < 1:3129194/101‑1 (MQ=255)
ccAGGCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCggggggg > 2:3681569/1‑100 (MQ=255)
ccAGCCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGt < 2:338694/101‑1 (MQ=255)
cAGGCCCCCCTGCGGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTg < 2:675286/101‑1 (MQ=255)
aGGCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCggggggggg > 1:6786762/1‑98 (MQ=255)
aGGCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCggggggggg > 2:623921/1‑98 (MQ=255)
aGGCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCggggggggg > 1:4836489/1‑98 (MQ=255)
aGGCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGa < 1:2548077/101‑1 (MQ=255)
aGGCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGa < 1:1877050/101‑1 (MQ=255)
aGGCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGa < 2:7318196/101‑1 (MQ=255)
aGGCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGGGa > 2:1067942/1‑101 (MQ=255)
gCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCgggggggggag > 1:7003895/1‑96 (MQ=255)
gCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAg < 1:5149458/101‑1 (MQ=255)
ccccccTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAG...c < 1:8499829/101‑1 (MQ=255)
cccccTGCAGCCGCATGCCGTCCGCGTCAACAGGCAATGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAG...cc < 1:9006183/101‑1 (MQ=255)
cccccTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGGGGAG...cc > 1:5251893/1‑101 (MQ=255)
cggcTGCAGCCGGATGCCGCGCGGGTGAGCCGGCAAGGGCCCCGCTTTTCCTAGGTAAAATGCGCCCTTCTTTCTTATCGGGGGGGGGGGGGGTGAGG...ccc < 2:9024881/98‑1 (MQ=255)
ccccTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAG...ccc < 1:8596676/101‑1 (MQ=255)
ccccTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAG...ccc < 1:6851363/101‑1 (MQ=255)
cccTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCggggggggggggccc > 2:383720/1‑92 (MQ=255)
cccTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAG...cccc < 1:7396425/101‑1 (MQ=255)
cccTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAG...cccc > 2:2347479/1‑101 (MQ=255)
cccTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGGGGAG...gccc > 2:5364835/1‑101 (MQ=255)
ccTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAG...ccccc < 2:2456263/101‑1 (MQ=255)
cTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAG...cccccc < 1:2406561/101‑1 (MQ=255)
cTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAG...cccccc < 2:3895712/101‑1 (MQ=255)
cAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAG...CCCCCC....gcg < 1:1814054/101‑3 (MQ=255)
cAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGGGGAG...ccccccccc > 1:2617009/1‑98 (MQ=255)
cAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGGGAAG...caccccccc > 2:5632416/1‑98 (MQ=255)
aGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAG...CCCCCC....gcgg > 2:3766251/1‑98 (MQ=255)
cGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAG...CCCCCC....gcgggtc < 1:5551296/101‑7 (MQ=255)
gCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGGGGAG...gccccccccgggtg > 2:8799210/1‑93 (MQ=255)
gCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGGGGAG...gccccccccgggcg > 2:5164857/1‑93 (MQ=255)
gCATCCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAG...CCCCCC....gcgggtcg < 1:1064219/101‑8 (MQ=255)
cATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGGGGAG...gcccccccggggcgc > 1:3805046/1‑92 (MQ=255)
aTGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGGGGAG...ccccccccggggcggc > 2:6426841/1‑91 (MQ=255)
acgggCAGGGCCCCCGCTTTTCCTGGGCAAAATACGCCCTCCTTTCTTTTCGGGGGGGCGGGGGTTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAg < 2:571090/98‑1 (MQ=12)
ggCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.g < 1:7822077/101‑1 (MQ=21)
ggCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAG...CCCCCC....GCGGGT...CG.CCTCGGGCTTGCCCGAGGC.g < 2:7740725/101‑1 (MQ=21)
gccagggcccccGTTTTCCCTGGGCAAAATCCCCCCTTCTTTCTTTGGGGGGGGGGGGGGGGGAAAC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.g < 2:4614877/93‑1 (MQ=2)
gCAAGGGCCCCGCTTTTCCTAGGCAAACTACGCCCTTCTTTCTTTGCGGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.Ga < 2:929356/101‑1 (MQ=18)
gCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.Ga < 1:921973/101‑1 (MQ=21)
cAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.Gaa > 2:3870616/1‑101 (MQ=21)
aGGGCCGCGCTGTCCCTAGTCAAACTTCGCCCTTCTTTCTTTGCGGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAg < 2:2887872/101‑1 (MQ=9)
gggCCCGGTTTTTCCGGGGAAAAGTCCGCCCTTGTTTTTGTGGGGGGGGGGGGGGGGGGAAC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGc < 1:6290766/101‑1 (MQ=2)
gcccccGTTTTTCCTAGGCAAAATCCCCCCTTTTTTCTTTGGGGGGGGGCGGGGGGGGAAC...CCCCCC....GCGGGT...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCt < 1:67034/99‑1 (MQ=2)
cacggCTTTTCCGGGCCAAAATGGGCTTTTGTTTCTTGCAGGGGGGGGAGAGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.c < 1:1283412/97‑1 (MQ=2)
cccGCTTTTCCTAGGCAAAATCCGCCCTTCTTTCTTGTCGGGGGGGGGGGGGGTGAAC...CCCCCC....GCGGGT...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.cc < 1:8173736/101‑1 (MQ=18)
cgtcTTTTCCTAGGCAAAATCCCCCTTTCTTTCTTTGGGGGGGGGCGGGGGGGGAAG...CCCCCC....GCGGGT...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.ccc < 2:55053/98‑1 (MQ=2)
ccGCTTTCCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAG...CCCCCC....GC...GGGTCG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.ccc < 2:8669873/101‑1 (MQ=18)
cGCTTTTCCTGGGCAAAATGCGCCCTTCTTTCTTTGCGGGGGGGCGGGGGGTGAAG...CCCCCC....GC...GGGTCG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.cccc < 2:2508570/101‑1 (MQ=17)
tttCCTAGGCAAAATCCGCCCTTCTTTCTTTGGGGGGGGGGGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGt < 1:4570822/101‑1 (MQ=17)
tCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGGGGAGGC.CCCCCCG...GG...G...CGCCCCCGGGCTGGCCCCCGGC.GGAAGCTT.ccccccccc > 1:6426769/1‑98 (MQ=255)
tCCTAGGAAAAATCCCCCTTTTTTTTTTTGGGGGGGGGGGGGGGGTGACC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGa < 1:3310579/101‑1 (MQ=2)
ccTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGaa < 2:2580140/101‑1 (MQ=21)
agtcAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAAc < 2:9143811/98‑1 (MQ=18)
aGGCAAATTCCCCCCTTCTTTCTTTTCGGGGGGGCGGGGGGGGAAC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAAc < 1:1687178/101‑1 (MQ=17)
aGGCAAAATACGCTCTTCTTTCTTTTGGGGGGGGCGGGGGTTGAAC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAAc < 2:3960076/101‑1 (MQ=18)
aGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAAc < 2:8439840/101‑1 (MQ=21)
gCAAGATGCCCCCTTCTTTTGTTAGGGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCt < 2:7089179/101‑1 (MQ=9)
gCAAAAGACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGTGGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCt < 1:7302494/101‑1 (MQ=18)
cAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCtt < 2:5169475/101‑1 (MQ=21)
cAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGGGAAG...CCCCCCGCG.GG...G...CG.CCTCGGGGCTGGCCGAGGG.GGAAGCTT.CCCCCCCGGGAAAccct > 1:2980902/1‑99 (MQ=12)
aaaTACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGGGGAGGC.CCCCCCGG..GG...C...GG.CCCCCGCCTTCCCCGGGGG.GAAAGCGT.CCCCCCCGGAAAAccctc > 1:6050026/1‑98 (MQ=255)
aattccgccTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGcc < 1:5888929/94‑1 (MQ=18)
aatgcccccTTCTTTCTTTGCGGGGGGGCGGGGGGTGCAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGcc < 1:5402615/95‑1 (MQ=17)
gtccTTCTTTCTTTTGGGGGGGGGGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTgcgc < 2:8334277/99‑1 (MQ=18)
tctttcttTTCGGGGGGGCGGGGGGGGAAG...CCCCCCCCGGGG...C...CG.CCCCGGGCTTGCCCCGGGG.GAAACCTT.CCCCCC.CGAAAAACCTGCCCgcgccccgc > 1:8914027/1‑96 (MQ=255)
tctttcttTTCGGGGGGGCGGGGGGGGAAG...CCCCCCCCG.GG...G...GG.CCCCGGGGTTGCCCCCGGC.GGAAGCTTCCCCCCCGGGAAAACCTTGccgccccgccc > 2:907546/1‑92 (MQ=255)
tttccttgTCGGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCg < 2:9003824/97‑1 (MQ=18)
ctgtctttGCGGGGGGGCGGGGGTTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCg < 2:4791002/98‑1 (MQ=18)
ttctttTCGGGGGGGCGGGGGGGGGAGGCCCCCCCCG...GG...C...GG.CCCCGGGGTGGCCCCGGGG.GAACGCTC.CCCCCCCGGAAAACCTT.CCTTcgcgcggcccc > 1:6013366/1‑96 (MQ=255)
ttctttTCGGGGGGGCGGGGGGGGAAG...CCCCCCGCG.GG...G...CG.CCTCGGGCGTGCCCCCGGG.GGCAGGTT.CCCCCCCTGAAAAACCTGCCTGCGCGCGGCGcc > 1:4386855/1‑100 (MQ=255)
tctttTCGGGGGGGCGGGGGGGGGAGGC.CCCCCCGG..GG...C...GG.CCCGGGGGTGGCCCGGGGG.GCAAGCTT.CCCCCCCCGAAAACCTGCCCTGCGCGCGGCGCt > 1:1162582/1‑101 (MQ=255)
ttttgggggggggGGGGGGGGGAAC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCttt < 1:383728/95‑1 (MQ=17)
ctttTGGGGGGGGGGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCttt < 2:4139532/101‑1 (MQ=18)
ctttTCGGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCttt < 2:2084553/101‑1 (MQ=21)
ctttTCGGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCttt < 1:4139230/101‑1 (MQ=21)
tttgCGGGGGGGGGGGGGGTGACG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTc < 1:9181550/101‑1 (MQ=18)
tttCGGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTcc < 1:56048/101‑1 (MQ=21)
ttgggggggggGGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTcc < 1:4961944/97‑1 (MQ=18)
ttCGGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTccc < 2:3511610/101‑1 (MQ=21)
ttCGGGGGGGCGGGGGGGGAAG...CCCCCCCCG.GG...G...CG.CCCCCGGCTTGCCCCCGGCGGAAACATT.CCCCCCCGGAAACACTT.CCTGGGCGCGGCGCTTTcgc > 2:5968239/1‑99 (MQ=255)
gggggCGGGGGGTGACG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCg < 2:5301255/101‑1 (MQ=21)
gggCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGc < 1:5688135/101‑1 (MQ=21)
gggCGGGGGGGGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGc < 2:8008591/101‑1 (MQ=21)
ggCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGcc < 1:331132/101‑1 (MQ=21)
cGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCg > 2:2430284/1‑101 (MQ=21)
cGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCg > 2:267526/1‑101 (MQ=21)
|
AGCGGGACCAGGCCCCCCTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAG...CCCCCC....GT...C...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCG > NC_014034/1732749‑1732946
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|