| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,732,868 | T→C | 8.5% | intergenic (‑292/‑111) | RCAP_rcc01601 ← / → tgt | FeS assembly SUF system protein/queuine tRNA‑ribosyltransferase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,732,868 | 0 | G→C | 8.5% | 10.6 ‑0.5 ‑0.5 | 82 | intergenic (‑292/‑111) | RCAP_rcc01601/tgt | FeS assembly SUF system protein/queuine tRNA‑ribosyltransferase |
| Reads supporting (aligned to +/- strand): new base (0/7): ref base (10/65): total (10/72) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.89e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.95e-01 | ||||||||||
CGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGGGGGTGAAG...CCCCCC....GT...C...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCGGC > NC_014034/1732780‑1732948
|
cGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGGGGGGGAAG...CCCCCC....GC...C...GG.ccgcccccg > 1:8193809/1‑94 (MQ=255)
gcAACAGGAGAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGGGGGTGAAG...CCCCCC....GCGGGT...CG.CCTCGGGCTTGccc < 2:6776328/100‑1 (MQ=21)
acgggCAGGGCCCCCGCTTTTCCTGGGCAAAATACGCCCTCCTTTCTTTTC.GGGGGGGCGGGGGTTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAg < 2:571090/98‑1 (MQ=12)
cAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATATGCCCTTCTTTCTTTTC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAgg < 2:934971/101‑1 (MQ=21)
gggCAAGGGCCCCGCTTTTCCGAGGCAAAATCCCCCCTTTTTTTTTTTG.GGGGGGGCGGGGGGTGAAC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGc < 1:2347546/100‑1 (MQ=9)
ggCAGGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTTTTTCTTTTC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.g < 1:4492154/101‑1 (MQ=18)
ggCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.g < 1:7822077/101‑1 (MQ=21)
ggCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.g < 2:8963130/101‑1 (MQ=21)
ggCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGGGGGTGAAG...CCCCCC....GCGGGT...CG.CCTCGGGCTTGCCCGAGGC.g < 2:7740725/101‑1 (MQ=21)
gccagggcccccGTTTTCCCTGGGCAAAATCCCCCCTTCTTTCTTTGG.GGGGGGGGGGGGGGGAAAC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.g < 2:4614877/93‑1 (MQ=2)
gCAAGGGCCCCGCTTTTCCTAGGCAAACTACGCCCTTCTTTCTTTGC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.Ga < 2:929356/101‑1 (MQ=18)
gCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.Ga < 1:921973/101‑1 (MQ=21)
cAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.Gaa > 2:3870616/1‑101 (MQ=21)
aGGGCCGCGCTGTCCCTAGTCAAACTTCGCCCTTCTTTCTTTGC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAg < 2:2887872/101‑1 (MQ=9)
gggCCCGGTTTTTCCGGGGAAAAGTCCGCCCTTGTTTTTGTGG.GGGGGGGGGGGGGGGGAAC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGc < 1:6290766/101‑1 (MQ=2)
gcccccGTTTTTCCTAGGCAAAATCCCCCCTTTTTTCTTTGG.GGGGGGGCGGGGGGGGAAC...CCCCCC....GCGGGT...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCt < 1:67034/99‑1 (MQ=2)
cacggCTTTTCCGGGCCAAAATGGGCTTTTGTTTCTTGCA.GGGGGGGGAGAGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.c < 1:1283412/97‑1 (MQ=2)
cccGCTTTTCCTAGGCAAAATCCGCCCTTCTTTCTTGTC.GGGGGGGGGGGGGGTGAAC...CCCCCC....GCGGGT...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.cc < 1:8173736/101‑1 (MQ=18)
cgtcTTTTCCTAGGCAAAATCCCCCTTTCTTTCTTTGG.GGGGGGGCGGGGGGGGAAG...CCCCCC....GCGGGT...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.ccc < 2:55053/98‑1 (MQ=2)
ccGCTTTCCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGGGGGTGAAG...CCCCCC....GC...GGGTCG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.ccc < 2:8669873/101‑1 (MQ=18)
cGCTTTTCCTGGGCAAAATGCGCCCTTCTTTCTTTGC.GGGGGGGCGGGGGGTGAAG...CCCCCC....GC...GGGTCG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.cccc < 2:2508570/101‑1 (MQ=17)
cTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTG.GGGGGGGGGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.cccccc < 1:5297489/101‑1 (MQ=18)
cTTTCCCTAGGCAAAATCCCCCCTTTTTTCTTTTG.GGGGGGGCGGGGGGTGACG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.cccccc < 1:5963820/101‑1 (MQ=9)
ttttCCTAGGCACAATTCGCCTTTCTTTCTTTGC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCg < 2:4879547/101‑1 (MQ=17)
ttttCCTAGGCAAAATCCGCCCTTCTTTCTTTTC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCg < 2:4676943/101‑1 (MQ=18)
tttCCTAGGCAAAATCCGCCCTTCTTTCTTTGG.GGGGGGGGGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGt < 1:4570822/101‑1 (MQ=17)
ttCCTAGGCAAAATGCGCCCTTCTTTCTTTTC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTg < 2:4103966/101‑1 (MQ=18)
ttCCTAGGCAAAANCCGCCTNNNTTTNTTNNC.GGGGGGGCGGGGGTTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTg < 1:3639305/101‑1 (MQ=17)
tcccTAGGCAAAATCCGCCCTTCTTTCTTTTG.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTg < 2:4534751/99‑1 (MQ=17)
tCCTAGGCAAAATCCGCCCTTTTTTCTTTTG.GGGGGGGGGGGGGGTGAAC...CCCCCCGCG.GG...T...CG.CCTTGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGa < 1:4754998/101‑1 (MQ=12)
tCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGGGGGGGGAGGC.CCCCCCG...GG...G...CGCCCCCGGGCTGGCCCCCGGC.GGAAGCTT.ccccccccc > 1:6426769/1‑98 (MQ=255)
tCCTAGGAAAAATCCCCCTTTTTTTTTTTGG.GGGGGGGGGGGGGGTGACC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGa < 1:3310579/101‑1 (MQ=2)
ccTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGaa < 2:2580140/101‑1 (MQ=21)
cTAGGCAAAATCCGCCCTTCTTTCTTTTC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGaaa < 2:7003610/101‑1 (MQ=18)
agtcAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAAc < 2:9143811/98‑1 (MQ=18)
aGGCAAATTCCCCCCTTCTTTCTTTTC.GGGGGGGCGGGGGGGGAAC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAAc < 1:1687178/101‑1 (MQ=17)
aGGCAAAATACGCTCTTCTTTCTTTTG.GGGGGGGCGGGGGTTGAAC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAAc < 2:3960076/101‑1 (MQ=18)
aGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAAc < 2:8439840/101‑1 (MQ=21)
gacAAAAGTCGCCCTTCTTTCTTTGG.GGGGGGGCGGGGGTGGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAAcc < 1:5693992/99‑1 (MQ=9)
gCAAGATGCCCCCTTCTTTTGTTAG.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCt < 2:7089179/101‑1 (MQ=9)
gCAAAAGACGCCCTTCTTTCTTTTC.GGGGGGGCGGGGGTGGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCt < 1:7302494/101‑1 (MQ=18)
gCAAAAAGCCCCCTTTTTTTTTTTCGGGGGGGGGGGGGGGTGACC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAAcc < 2:3051691/101‑1 (MQ=9)
cAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCtt < 2:5169475/101‑1 (MQ=21)
cAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGGGGGGGAAG...CCCCCCGCG.GG...G...CG.CCTCGGGGCTGGCCGAGGG.GGAAGCTT.CCCCCCCGGGAAAccct > 1:2980902/1‑99 (MQ=12)
aaaTACGCCCTTCTTTCTTTTC.GGGGGGGCGGGGGGGGGAGGC.CCCCCCGG..GG...C...GG.CCCCCGCCTTCCCCGGGGG.GAAAGCGT.CCCCCCCGGAAAAccctc > 1:6050026/1‑98 (MQ=255)
aattccgccTTCTTTCTTTTC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGcc < 1:5888929/94‑1 (MQ=18)
aatgcccccTTCTTTCTTTGC.GGGGGGGCGGGGGGTGCAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGcc < 1:5402615/95‑1 (MQ=17)
aaTCCGCCCTTCTTTCTTTGC.GGGGGGGGGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGcc < 1:2629042/101‑1 (MQ=18)
aaTACGCCCTTCTTTCTTTTC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGcc < 1:7332099/101‑1 (MQ=21)
aCGCCCTTCTTTCTTTTC.GGGGGGGCGGGGGGGGGAGCCCCCCCCC....GG...G...CGCCCCCGGGCTTCCCCGGGGG.GAAGGCTT.CCCCCCGGGAAAACCtgccccc > 2:5253443/1‑95 (MQ=255)
gtccTTCTTTCTTTTG.GGGGGGGGGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTgcgc < 2:8334277/99‑1 (MQ=18)
ccTTCTTTCTTGGG.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTgcgcgc < 1:9073136/101‑1 (MQ=17)
tctttcttTTC.GGGGGGGCGGGGGGGGAAG...CCCCCCCCGGGG...C...CG.CCCCGGGCTTGCCCCGGGG.GAAACCTT.CCCCCC.CGAAAAACCTGCCCgcgccccgc > 1:8914027/1‑96 (MQ=255)
tctttcttTTC.GGGGGGGCGGGGGGGGAAG...CCCCCCCCG.GG...G...GG.CCCCGGGGTTGCCCCCGGC.GGAAGCTTCCCCCCCGGGAAAACCTTGccgccccgccc > 2:907546/1‑92 (MQ=255)
tttccttgTC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCg < 2:9003824/97‑1 (MQ=18)
ctgtctttGC.GGGGGGGCGGGGGTTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCg < 2:4791002/98‑1 (MQ=18)
ttctttTC.GGGGGGGCGGGGGGGGGAGGCCCCCCCCG...GG...C...GG.CCCCGGGGTGGCCCCGGGG.GAACGCTC.CCCCCCCGGAAAACCTT.CCTTcgcgcggcccc > 1:6013366/1‑96 (MQ=255)
ttctttTC.GGGGGGGCGGGGGGGGAAG...CCCCCCGCG.GG...G...CG.CCTCGGGCGTGCCCCCGGG.GGCAGGTT.CCCCCCCTGAAAAACCTGCCTGCGCGCGGCGcc > 1:4386855/1‑100 (MQ=255)
ttccttgtggggggggGGGCGGGTGAAG...CCCCCCGCG.GG...G...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGc < 1:922659/92‑1 (MQ=18)
tctttTC.GGGGGGGCGGGGGGGGGAGGC.CCCCCCGG..GG...C...GG.CCCGGGGGTGGCCCGGGGG.GCAAGCTT.CCCCCCCCGAAAACCTGCCCTGCGCGCGGCGCt > 1:1162582/1‑101 (MQ=255)
tttttgggggggggGGGGGGGTGAGC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCtt < 1:2135367/94‑1 (MQ=17)
ctttTG.GGGGGGGGGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCttt < 2:4139532/101‑1 (MQ=18)
ctttTC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCttt < 1:5165026/101‑1 (MQ=21)
ctttTC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCttt < 1:4139230/101‑1 (MQ=21)
ctttTC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCttt < 2:2084553/101‑1 (MQ=21)
ctttTC.GGGGGGGCGGGGGGGGAAGGC.CCCCCCGG..GG...G...GG.CCCCGGGGTGGCCCGGGGG.GAAGGGTC.CCCCCCGCGAAAACCTTTCC.GCGCGCGCCggctt > 2:6227605/1‑97 (MQ=255)
ttttgggggggggGGGGGGGGGAAC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCttt < 1:383728/95‑1 (MQ=17)
tttgC.GGGGGGGGGGGGGGTGACG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTc < 1:9181550/101‑1 (MQ=18)
tttcC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTc < 2:3750071/101‑1 (MQ=18)
tttC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTcc < 1:56048/101‑1 (MQ=21)
tttC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...G...CG.GCTCGGGGTTGCCCGGGGG.GAAAGCGT.TCCCCCGGGAAAAACTTTGCTGCGCGCGTGGGTTTcc > 1:1338346/1‑101 (MQ=255)
tttC.GGGGGGGCGGGGGGCGAAG...CCCCCCGCG.GG...G...CG.CCTCCGGGTTGCCCGAGGC.GGAAGCTT.CCCCCCCCGAAAAACCTGCCTGCGCGCGGCCCCTTcc > 2:6345974/1‑101 (MQ=2)
ttgggggggggGGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTcc < 1:4961944/97‑1 (MQ=18)
ttC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTccc < 2:796891/101‑1 (MQ=21)
ttC.GGGGGGGCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTccc < 2:3511610/101‑1 (MQ=21)
ttC.GGGGGGGCGGGGGGGGAAG...CCCCCCCCG.GG...G...CG.CCCCCGGCTTGCCCCCGGCGGAAACATT.CCCCCCCGGAAACACTT.CCTGGGCGCGGCGCTTTcgc > 2:5968239/1‑99 (MQ=255)
tggggggggGGGGGGGGGAGG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCt < 1:322251/99‑1 (MQ=18)
c.GGGGGGGCGTGGGTGGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCtt < 2:2246000/101‑1 (MQ=18)
c.GGGGGGGCGGGGGGGGAAG...CCCCCCGCG.GG...G...CG.CCCCCGGCGTGCCCGCGGCGGAAACGTC.CCCCCCCCGAAAACC.TGCCCCCGCGCGGCGCTTTCCCtt > 2:8016072/1‑101 (MQ=255)
ggggggCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTc < 2:8516181/101‑1 (MQ=21)
ggggggCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTc < 2:1136105/101‑1 (MQ=21)
gggggCGGGGGGTGACG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCg < 2:5301255/101‑1 (MQ=21)
gggGGGGGGGTGAAC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGc < 1:6303815/101‑1 (MQ=21)
gggCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGc < 1:5688135/101‑1 (MQ=21)
gggCGGGGGGGGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGc < 2:8008591/101‑1 (MQ=21)
ggCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGcc < 2:879266/101‑1 (MQ=21)
ggCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGcc < 1:331132/101‑1 (MQ=21)
gCGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGccc < 2:3950001/101‑1 (MQ=21)
cGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCg > 1:3962372/1‑101 (MQ=21)
cGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCg < 2:1699815/101‑1 (MQ=21)
cGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCg > 2:2430284/1‑101 (MQ=21)
cGGGGGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCg > 2:267526/1‑101 (MQ=21)
ggggggTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGccccg > 2:5569540/1‑99 (MQ=21)
ggggggTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCgc > 1:7707072/1‑100 (MQ=21)
ggggggTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGCCGCTTTCCCTTTCGGCCCgg > 2:705857/1‑101 (MQ=21)
gggggTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCGgc < 2:2717010/101‑1 (MQ=21)
|
CGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTC.GGGGGGGCGGGGGGTGAAG...CCCCCC....GT...C...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCGGC > NC_014034/1732780‑1732948
Base quality scores:
ATCG
< 3 ≤
ATCG
< 8 ≤
ATCG
< 20 ≤
ATCG
< 32 ≤
ATCG
< 39 ≤
ATCG
|