| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,787,358 | G→A | 1.4% | intergenic (+83/+144) | RCAP_rcc01649 → / ← RCAP_rcc01650 | ABC transporter ATP‑binding protein/ABC transporter permease |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,787,358 | 0 | G→A | 1.4% | 2.1 ‑0.5 ‑0.4 | 292 | intergenic (+83/+144) | RCAP_rcc01649/RCAP_rcc01650 | ABC transporter ATP‑binding protein/ABC transporter permease |
| Reads supporting (aligned to +/- strand): new base (4/0): ref base (204/84): total (208/84) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.82e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.86e-01 | ||||||||||
Only 100 of 379 total aligned reads displayed.
CGGCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGAGGG.CCTTTGGGGCCCTCGGCGGTCATGGGAC > NC_014034/1787258‑1787458
|
ggCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCgg < 2:4314371/101‑1 (MQ=255)
gCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCggg < 2:8504098/101‑1 (MQ=255)
cggAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGa < 2:4106683/99‑1 (MQ=255)
cTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGa > 2:7304062/1‑101 (MQ=255)
aGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACag < 1:8092428/101‑1 (MQ=255)
cGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACagag < 1:6617115/101‑1 (MQ=255)
cGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACagag < 1:1244402/101‑1 (MQ=255)
cGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACagag > 1:3765822/1‑101 (MQ=255)
gAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAgg > 1:859531/1‑101 (MQ=255)
aGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACagagag > 1:1554610/1‑99 (MQ=255)
gggTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCt > 2:5027092/1‑101 (MQ=255)
tGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.gcg > 1:3865489/1‑101 (MQ=255)
cgcgGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTcc < 2:312228/101‑1 (MQ=255)
gcgGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCg < 2:7494751/101‑1 (MQ=255)
gcgGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCg < 1:8868964/101‑1 (MQ=255)
cgGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGc > 1:1944100/1‑101 (MQ=255)
cgGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGc > 2:1468233/1‑101 (MQ=255)
gttttCGGGCGTATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGcc < 2:7093086/99‑1 (MQ=255)
ggTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGcc > 2:7884092/1‑101 (MQ=255)
gTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCCAGCGGGACAGAGGCCT.GCGCTCCGccc > 2:3602993/1‑101 (MQ=255)
tttCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGcccc > 2:7617770/1‑101 (MQ=255)
ttCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCcg < 2:6652066/101‑1 (MQ=255)
ttCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCcg < 1:2884974/101‑1 (MQ=255)
cGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCcggc > 1:4881324/1‑101 (MQ=255)
gATCAGGAAAGGCGCCCCTTTCCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGcgcg < 2:3786714/101‑1 (MQ=18)
gATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGcgcg > 1:2191638/1‑101 (MQ=255)
aTCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGa > 1:8951142/1‑101 (MQ=255)
aTCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGa > 1:6341157/1‑101 (MQ=255)
gggAAAGGCACTGCCTTTCCCCGCCCGCTGGCGCATCACCTGTGCC.AAGACCGTTTCCCCAAGCACGACAGAGGCCT.TTGCCCCCCCCCCCCGCcgcgcag > 1:7975013/2‑98 (MQ=25)
aGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATg > 1:1135787/1‑101 (MQ=255)
gAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATgcg > 2:2006146/1‑101 (MQ=255)
aaaGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATgcgc > 2:2396832/1‑101 (MQ=255)
aGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGcgccc > 2:8123280/1‑101 (MQ=255)
ggCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGcgcccg < 1:2493941/101‑1 (MQ=255)
cccGCCTTCCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.a < 1:4117734/100‑1 (MQ=255)
aCCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGcgcccgccc > 2:2305749/1‑100 (MQ=255)
ccGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ac > 1:1093688/1‑100 (MQ=255)
gCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCCCC.ACgg > 2:2963188/1‑101 (MQ=255)
ccTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATggg > 1:6125120/1‑101 (MQ=255)
ccTTCCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATggg < 2:1688268/101‑1 (MQ=255)
ttttCCCCGCCCG.TGTCGCGACAG.CGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCA.ACGCCCAGCCCCGGCGGCGCGAAAAGGCCCGCC.ACgggg > 1:8914799/2‑100 (MQ=25)
cTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATgggc > 1:3118269/1‑101 (MQ=255)
cTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATgggc > 2:8315422/1‑101 (MQ=255)
tttCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATgggcg > 2:2163718/1‑101 (MQ=255)
ttCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATgggcgg > 2:9189268/1‑101 (MQ=255)
ttCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATgggcgg > 1:1998499/1‑101 (MQ=255)
ttCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCCCCGCCCCGGCGGCGCGAATACGGCCGCC.ATgggcgg > 2:8653236/1‑101 (MQ=255)
cccgcccg.TATCGCAACAGCCGCGGC.ATGCCCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATgggcggggc < 2:1289443/101‑1 (MQ=255)
cccg.TATCGCAACAGCCGCGGC.ATGACCGTTCCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGgggcgggc < 1:6205498/101‑1 (MQ=255)
cg.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGgggc > 1:5924962/1‑101 (MQ=255)
cg.TATCGCAACAGCCGCGGC.AGGACCGTTTCCGCAATCGGGTCGAAGTCCT.TCGCAGCCCCCCCGCGTGGCCGATGCTCCCGCC.AGCGccggggcaggtgg > 2:509311/1‑98 (MQ=9)
cg.TACCGCAACAGCCGCGCC.AGGACCGTTCCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGgcgc < 2:5774713/101‑1 (MQ=18)
g.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGgggcc > 1:5813068/1‑100 (MQ=255)
g.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGgcgcc > 2:3992165/1‑100 (MQ=255)
tATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGgcggggcggggggcg > 2:4478198/1‑96 (MQ=255)
tATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCAg > 1:1688472/1‑101 (MQ=255)
aTCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCCgg > 1:226605/1‑101 (MQ=255)
cGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGGGCCGGcc > 1:3816182/1‑101 (MQ=255)
gCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCCGGCCg > 1:8445864/1‑101 (MQ=255)
ccAACCGCCGGGGG.AGGCCCGTTGCCGCAGGGGGGACAGAGGCCT.GCCCCCCGCCCCGGCGGCGCGAATGCCCCCGCC.ATGGGCGGGGCGGGCGCAGGCCg < 1:7717141/100‑1 (MQ=14)
cAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGGGCCGGccca > 2:1526620/1‑99 (MQ=255)
aCAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGAgg < 2:3345588/101‑1 (MQ=255)
ccGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGGGCAGGCCGAggggcc > 1:2757700/1‑98 (MQ=255)
ccGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCCGGCCCAGGG.ccc > 2:1936882/1‑100 (MQ=255)
cgcgGC.AGGACCGTTCCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGAGGG.CCtt < 2:7737395/101‑1 (MQ=255)
tgtgccaagACCGTTTCCCCAAGCACGACAGAGGCCT.GCGCCCAGCCCCGGCGGCGCGAATGCGCCCCCCGATGGG.GGGGCGGGGGGCGGGCGGGGG.ccct > 2:3470959/9‑99 (MQ=18)
gcgGC.ATGACCTTTTCCGCAAGCGGGACAGAGCCCT.GCGCTCCGCCCCGGCGGCGCGAAGGCGCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGAGGG.CCttt < 2:1005767/101‑1 (MQ=255)
cgGC.ATGGCCGTTCCCGCACGCGGGACAGGGGCCT.GCCCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGAGGG.CCTTTg < 2:7224866/101‑1 (MQ=17)
cgGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCCCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGAGGG.CCTTTg < 1:52783/101‑1 (MQ=255)
c.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATTCGCCCGCC.ACGGGCGGGGGGGGGGGCGGCCGCGGG.GCCTGgggg > 1:2927944/1‑101 (MQ=17)
aTGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGGGGGCCGACGCCACGGG.CCTTTTGGGc > 1:452476/1‑101 (MQ=18)
aTGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGGGCAGGCCGCGGG.CCGTTgcggg > 1:7343478/1‑100 (MQ=17)
tGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGGGGGGCGGGCGCCGGCCGGGGG.CCCTTgggggc > 1:4673125/1‑99 (MQ=17)
gccctttcccGCAGGCGGGACAGAGGCCT.GCGCTCCCCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGAGGG.CCTTTGGGGccc < 2:8940739/93‑1 (MQ=14)
gACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCCGGGCGGGGGCCCTTTGGGGcc > 2:4745871/1‑101 (MQ=17)
gACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCCGGCCGAGGG.GCTTTGGGGgcc > 1:9161316/1‑101 (MQ=255)
gACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGGGGG.GCTTTGGGGgcc > 2:8836229/1‑101 (MQ=255)
gACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGCGGG.CCTTTGGGGgcc > 1:5127705/1‑101 (MQ=255)
cccggTTCCCGCAGGGGGGAC.GGGGCCTGGCGCCCCGCCCGGGCGGCGCGAATGCCCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGAGGG.CCTTTGGGGccc < 1:6728381/97‑1 (MQ=11)
cccGTTCCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGAGGG.CCTTTGGGGCCCt < 2:251121/100‑1 (MQ=255)
aCCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCCGGGCCCGGG.CCGTTGGGGgccc > 1:4186880/1‑100 (MQ=17)
ccGTTTCCGCAAGCGGGACGGAGGCCG.CCCCCCCGCCCCGGGGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGAGGG.CCTTTGGGGCCCTc < 1:3348297/101‑1 (MQ=17)
ccGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCGGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGGGCAGGCCGAGGG.CCTTTGGGGCCCTc < 2:1160788/101‑1 (MQ=255)
cGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGGGCAGGCCGCGGG.CCTTTTGGGGCCTcg > 2:4192539/1‑101 (MQ=17)
tttcccccAAGGGGGACGGAGGCCT.GCCCTCCCCCCCGGCGGCGCAAAGGCGCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGAGGG.CCTTTGGGGCCCTcgg < 1:7135733/94‑1 (MQ=14)
tttCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGAGGG.GCTTTTGGGGCCTcggc > 1:2612412/1‑101 (MQ=255)
tcccGCAGGCGGGACAGAGGCCG.GCGCCCCGCCCCGGCGGCGGGACGGCCCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGAGGG.CCTTTGGGGCCCTcggcg < 1:1335994/99‑1 (MQ=14)
ggCAAGCGGGACAGGGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGAGGG.CCTTTGGGGCCCTCGGCGGTc < 1:3560455/100‑1 (MQ=255)
cGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCAGGGCGAGGG.CCTTTTGGGGCCCccgcgggc > 1:5389219/1‑99 (MQ=14)
gcaggggggACAGAGCCCT.GCGCCCCCCCCCGGCGGCGCGAAGGCGCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGAGGG.CCTTTGGGGCCCTCGGCGGTCa < 1:7438918/95‑1 (MQ=14)
gCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGAGGG.GCTTTGGGGGCCTCGGCGGGCa > 2:6397896/1‑101 (MQ=255)
gaaGCGGGCCAGGGCCCT.GCCCCCCGCCCCGGCGGCGCGAATGCCCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGAGGG.CCTTTGGGGCCCTCGGCGGTCAt < 1:8282343/100‑1 (MQ=14)
cAAGCGGGCCAGAGGCCT.GCCCCCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGAGGG.CCTTTGGGGCCCTCGGCGGTCAt < 1:1493793/101‑1 (MQ=255)
cAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGAGGG.CCCTTTGGGGCCTCGGCGGGCag > 2:5516983/1‑100 (MQ=14)
cAAGCGGCAAGGAGGCCG.GCGCCCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGAGGG.CCTTTGGGGCCCTCGGCGGTCAt < 2:5924727/101‑1 (MQ=14)
aggggggACAGGGGCGT.GCGCCCCGCCCGGGCGGCGGGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGAGGG.CCTTTGGGGCCCTCGGCGGTCATg < 1:5733587/97‑1 (MQ=14)
aaGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGAGGG.GCTTTGGGGGCCCCCGCGGGCATg > 2:6048567/1‑101 (MQ=14)
aaGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGAGGG.GCCTTGGGGGCCTCGGCGGGCATg > 2:2752475/1‑101 (MQ=14)
ggagggAGAGAGGCCG.GCATGCCGCCCCGGGGGCGGGAATCCGCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGAGGG.CCTTTGGGGCCCTCGGCGGTCATgg < 2:9098078/98‑1 (MQ=14)
gggACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGAGGG.CCTTTGGGGCCCTCGGCGGGCCTgggga > 2:6910923/1‑99 (MQ=255)
|
CGGCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGCGGGGCGGGCGCAGGCCGAGGG.CCTTTGGGGCCCTCGGCGGTCATGGGAC > NC_014034/1787258‑1787458
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|