| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,373 | C→A | 4.2% | intergenic (‑169/‑136) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,373 | 0 | C→A | 4.2% | 34.2 ‑2.2 ‑0.3 | 459 | intergenic (‑169/‑136) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (14/6): ref base (226/212): total (241/218) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.16e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.15e-01 | ||||||||||
Only 100 of 505 total aligned reads displayed.
GGCTCTG.CCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGG > NC_014034/2249274‑2249472
|
ggCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GAG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TAgcgc > 2:4211706/1‑101 (MQ=37)
tctgcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..Gc < 1:5873162/96‑1 (MQ=255)
gcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCag > 1:2691587/3‑101 (MQ=255)
ccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCagag < 2:5535179/101‑1 (MQ=255)
cccgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgg < 1:4713756/101‑1 (MQ=255)
ccgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggg < 1:3531674/101‑1 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggggg > 2:5720029/1‑101 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggggg > 2:9139202/1‑101 (MQ=255)
tcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGCTGAA...GGG..G..GGCTTTCATCTTGCCGCAAATATCCCGGGGGGGGAA.TGGCGCC..GCCCGAgggggg > 1:2967431/1‑101 (MQ=37)
tcccgtGCCGGGACT.CCCCCCGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggggg < 1:7246252/101‑1 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGc < 2:4567622/101‑1 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGc > 1:1388815/1‑101 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGc > 1:8915531/1‑101 (MQ=255)
gtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAgc < 2:2198624/101‑1 (MQ=255)
gtGACGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAgc < 1:2906103/101‑1 (MQ=255)
gggCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAgc < 1:7629877/99‑1 (MQ=255)
caagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGA..T..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGc < 2:6110797/96‑1 (MQ=18)
caagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGA..T..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGc > 2:6516338/6‑101 (MQ=18)
caagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGA..T..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGc > 1:4364353/6‑101 (MQ=18)
cGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.cc.c < 1:7664704/101‑1 (MQ=255)
cGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.cc.c < 2:8191464/101‑1 (MQ=255)
gggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.cc.cc > 2:3002039/1‑101 (MQ=255)
gggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.cc.cc < 1:226673/101‑1 (MQ=255)
cT.CCCCCGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.cc.cccctt < 2:2776742/101‑4 (MQ=255)
cT.CCCCCGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.cc.cccctt < 1:2422173/101‑4 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.cc.ccccttc < 2:3702144/101‑5 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.cc.ccccttc > 1:7059912/1‑97 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTGGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.cc.ccccttc < 2:1735425/101‑5 (MQ=255)
cccccGGGATATTTGCGGGAAGATGAA...GGGTCA..TGATTTCATCTTGCCCGAAATAGCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAGCG.CC.CCCt < 1:6088224/101‑1 (MQ=2)
cccccGGGATATTTGCGGCAAGATGAA...GGG..GCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAGCG.CC.CCCt < 1:1892457/101‑1 (MQ=0)
cccccGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.cc.ccccttcg < 2:1464103/101‑6 (MQ=255)
ccccGGGATATTTGCGGCAAGATGAA...GGG..GCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAGCG.CC.CCCtg > 2:8587461/1‑100 (MQ=0)
ccccGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTcgc > 2:7265326/1‑101 (MQ=255)
ccccGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTcgc < 1:3276956/101‑1 (MQ=255)
cccGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTCTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGTGGGGCAGCGCCC.CCCTTcgcg > 1:6446734/1‑101 (MQ=25)
ccGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCgcgg > 1:7989119/1‑101 (MQ=255)
cGGGATATTGGCGGCAAGATGAA...GGG..GCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAGCG.CC.CCCtgccc > 1:8802080/1‑97 (MQ=2)
gggATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCgcgggc > 2:8894636/1‑101 (MQ=255)
ggATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCgcgggcg > 1:4991200/1‑101 (MQ=255)
tGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGa < 1:7902126/101‑1 (MQ=255)
tGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGa > 1:965530/1‑101 (MQ=255)
gAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGAc > 2:4908152/1‑101 (MQ=255)
aGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGAcg < 2:2065188/101‑1 (MQ=255)
ggCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGAcgc < 2:4060210/101‑1 (MQ=255)
gCAAGATGAA...GGG..G..GTCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGAcgcg < 2:2026013/101‑1 (MQ=255)
aaGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGGcgcgcg > 2:6260781/1‑101 (MQ=255)
aGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACgcgcgc < 2:2340814/101‑1 (MQ=255)
gAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCa > 1:4166559/1‑101 (MQ=255)
aa...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCaa > 2:6865349/1‑101 (MQ=255)
aa...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGAGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCaa > 2:6966749/1‑101 (MQ=255)
a...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCGGCAAc > 2:7379385/1‑101 (MQ=255)
a...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAAc > 2:7557792/1‑101 (MQ=255)
g..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAggc > 2:4761170/1‑100 (MQ=255)
g..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGt > 2:8374043/1‑101 (MQ=255)
g..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGAAGCGCGCCGCAACAggc > 1:8282087/1‑100 (MQ=255)
ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCCCGACGCCCGCCGCAACAGGTc > 1:104517/1‑101 (MQ=25)
ggCGTTCATCTGCCCGAAAATATCGCGGGGGGTGAA.TGGCGCA..GCGAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTc < 2:1852102/101‑1 (MQ=37)
tttCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg > 1:6856556/1‑101 (MQ=255)
cATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGccc > 1:4006938/1‑101 (MQ=255)
aTCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcccc > 2:5970751/1‑101 (MQ=255)
aTCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcccc > 2:3504687/1‑101 (MQ=255)
cTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt > 2:4695158/1‑101 (MQ=255)
tGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTg > 2:1101625/1‑101 (MQ=255)
cggAAAATATCGCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTc < 2:3291633/99‑1 (MQ=255)
ccGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCTTGCCCCTTTGTc < 1:6630177/101‑1 (MQ=255)
ccGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTc < 2:1336230/101‑1 (MQ=255)
ccGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGCGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTc > 2:545694/1‑101 (MQ=255)
cGAAAATATCCAGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTGCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCa < 2:248343/101‑1 (MQ=37)
aaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTc < 2:2666988/101‑1 (MQ=255)
aaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTc > 1:8511560/1‑101 (MQ=255)
aaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTc < 1:7456494/101‑1 (MQ=255)
aaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCt < 1:168561/101‑1 (MQ=255)
atagCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTg < 1:7729471/101‑1 (MQ=255)
atCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTc > 2:3852407/1‑101 (MQ=255)
ccGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCa > 1:1193650/1‑101 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc > 1:5520198/1‑101 (MQ=255)
gggtctgcagggCTCA..GCCGGAGGGGGGCGGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc < 2:7689603/91‑1 (MQ=255)
ggggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCCTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCa > 2:8004797/1‑101 (MQ=255)
gtgTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt < 2:5871198/99‑1 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 1:3395560/1‑101 (MQ=255)
gTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATgc > 2:8981637/1‑100 (MQ=255)
gTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGt < 2:6665599/101‑1 (MQ=255)
gTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGt > 1:3640337/1‑101 (MQ=255)
gAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCa < 2:7866986/101‑1 (MQ=255)
gAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCa > 1:4823683/1‑101 (MQ=255)
gAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCa > 2:7099653/1‑101 (MQ=255)
atctGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCa < 2:5295001/98‑1 (MQ=255)
aa.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt < 1:3170149/101‑1 (MQ=255)
aa.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt < 1:5397756/101‑1 (MQ=255)
a.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa > 1:5697934/1‑101 (MQ=255)
a.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa < 2:6597307/101‑1 (MQ=255)
a.TGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa < 1:2049720/101‑1 (MQ=255)
tGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa > 2:5111777/1‑101 (MQ=255)
tGGCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa < 1:6282056/101‑1 (MQ=255)
ggCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCaagat > 1:5295185/1‑97 (MQ=255)
ggCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAg < 1:9158566/101‑1 (MQ=255)
ggCGCA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAg < 1:1532694/101‑1 (MQ=255)
ggCGCA..GCCAGAGGGGGGCAGCG.CCTCCCTGCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAg < 2:1532035/101‑1 (MQ=255)
cA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTgg < 1:3738659/101‑1 (MQ=255)
cA..GCCAGAGGGGGGCAGCGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTgg > 2:1270991/1‑101 (MQ=255)
|
GGCTCTG.CCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGG..G..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGG > NC_014034/2249274‑2249472
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 26 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|