| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,379 | G→A | 2.4% | intergenic (‑175/‑130) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,379 | 0 | G→A | 2.4% | 17.3 ‑1.5 ‑0.7 | 454 | intergenic (‑175/‑130) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (8/3): ref base (227/216): total (235/219) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.24e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.15e-01 | ||||||||||
Only 100 of 512 total aligned reads displayed.
TGCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCG.CC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCAT > NC_014034/2249279‑2249478
|
gcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCag > 2:3917124/3‑101 (MQ=255)
gcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCag > 1:5875644/3‑101 (MQ=255)
ccgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggg < 1:3352527/101‑1 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggggg > 2:9158144/1‑101 (MQ=255)
tcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggggg < 1:4053185/101‑1 (MQ=255)
tcccgtGCCGGGACT.CCCCCCGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggggg < 1:7246252/101‑1 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAg < 2:8502363/101‑1 (MQ=255)
gtGCCGGGACT.CCCCCGGGAAATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAgc > 1:2645482/1‑101 (MQ=255)
gggCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAgc < 1:7629877/99‑1 (MQ=255)
caagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATACCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGG.c < 1:6454527/96‑1 (MQ=18)
cGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCG.cc.c < 1:7664704/101‑1 (MQ=255)
cT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCG.cc.c.ccctt < 1:3038057/101‑4 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCG.cc.c.cccttc > 1:7059912/1‑97 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCG.cc.c.cccttc < 2:108225/101‑5 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCG.cc.c.cccttc > 1:94288/1‑97 (MQ=255)
ccccGGGATATTTGAGGCAAGATGAA...GGTG..TCCTTTCATCTTGCCGAAAATATCCCAGGCGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTcgc < 2:7325280/101‑1 (MQ=21)
cccGGGATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGG.CAGCG.CC.C.CCtgc > 2:8121891/1‑99 (MQ=2)
ccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCgcgg > 1:7989119/1‑101 (MQ=255)
gggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCgcgggc > 2:3383730/1‑101 (MQ=255)
ggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCgcgggcg > 1:4991200/1‑101 (MQ=255)
atatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGggcggc > 2:3121539/1‑101 (MQ=255)
atatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGggcggc > 2:3720733/1‑101 (MQ=255)
tatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGcc < 1:3496917/101‑1 (MQ=255)
tatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGcc > 2:5563506/1‑101 (MQ=255)
tatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGcc > 1:201674/1‑101 (MQ=255)
atTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCcg > 2:4167831/1‑101 (MQ=255)
tGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGa < 1:7902126/101‑1 (MQ=255)
tGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGa > 2:6930111/1‑101 (MQ=255)
gAGGCAAGATGAA...GGGG..GTCTTTCATCTTGCCGAAAATATCGCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGAc < 2:9023061/101‑1 (MQ=37)
aGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGAcg > 2:6290077/1‑101 (MQ=255)
aaGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGCcgcgcg > 1:2233317/1‑101 (MQ=255)
tGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGcgccgc > 2:1892084/1‑101 (MQ=255)
gAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCa > 2:5877176/1‑101 (MQ=255)
gAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCa < 2:8915125/101‑1 (MQ=255)
aa...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCaa > 2:8296706/1‑101 (MQ=255)
aa...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCaa > 1:8437312/1‑101 (MQ=255)
a...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGGGACGCGCGCCGCacc > 1:8866058/1‑99 (MQ=255)
a...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 2:143857/101‑1 (MQ=255)
a...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 2:4716052/101‑1 (MQ=255)
ggg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAg < 2:2704485/101‑1 (MQ=255)
ggg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAg < 2:7194864/101‑1 (MQ=255)
gg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAgg < 2:4959999/101‑1 (MQ=255)
gg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAgg < 1:6664534/101‑1 (MQ=255)
ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCCCGACGCCCGCCGCAACAGGTc > 1:104517/1‑101 (MQ=25)
gCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCg > 2:2052331/1‑101 (MQ=255)
tttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg > 2:46374/1‑101 (MQ=255)
tttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg < 2:2085355/101‑1 (MQ=255)
ttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGc > 1:470451/1‑101 (MQ=255)
cTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt > 2:1207273/1‑101 (MQ=255)
ttGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCttt < 1:9108057/101‑1 (MQ=255)
tGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTg > 2:5994234/1‑101 (MQ=255)
gCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGt < 2:2202575/101‑1 (MQ=255)
ccGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTc > 1:745313/1‑101 (MQ=255)
cGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCa > 2:6984678/1‑101 (MQ=255)
cGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCa < 2:7407471/101‑1 (MQ=255)
gAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAt < 1:3216960/101‑1 (MQ=255)
gAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAt > 2:6147952/1‑101 (MQ=255)
aaaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAtt > 2:1321964/1‑101 (MQ=255)
aaaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAtt > 2:6523545/1‑101 (MQ=255)
aaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTc < 2:6730736/101‑1 (MQ=255)
aaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTc > 2:5333992/1‑101 (MQ=255)
aaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTc > 1:8511560/1‑101 (MQ=255)
aaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGAGGGCG.CC.C.CTTCCGCGGG.GGGCGCGACGCGCGCCGCAACAGGTCCGGCCCCTTTGTCAttttt > 2:4449441/1‑98 (MQ=25)
aaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCt < 1:168561/101‑1 (MQ=255)
atatCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCG.CC.CACCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGGGCCCCTTTGTCATTGTg > 1:4225264/1‑101 (MQ=38)
atagCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTg < 1:7729471/101‑1 (MQ=255)
gtgccGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTc < 2:17513/98‑1 (MQ=255)
atCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTc > 2:4768171/1‑101 (MQ=255)
tCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCg < 2:5769311/101‑1 (MQ=255)
cccGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGGCGc > 1:2953672/1‑101 (MQ=255)
ccGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCa > 1:1193650/1‑101 (MQ=255)
cGGGGGCTGAA.TGGGGAA..GCTAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAc < 2:5507599/101‑1 (MQ=255)
ggggggTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAcc < 1:3820811/101‑1 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc > 1:5520198/1‑101 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc > 2:3603947/1‑101 (MQ=255)
ggggTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCa < 2:7714973/101‑1 (MQ=255)
ggggTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCa < 1:6292409/101‑1 (MQ=255)
gggGGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt < 2:2892870/101‑1 (MQ=255)
gTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGt > 1:3640337/1‑101 (MQ=255)
ttggactgcgcA..TCGAGCGGGAGG.GAGCG.CCGC.TCGTCGGTGGGGGCCGGGAGGCGCGCCGCAACAGGTCGTTCCCCTTTTTCAATCTGTCGCGCCCATGt < 2:7961388/94‑1 (MQ=255)
gAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCa > 1:4823683/1‑101 (MQ=255)
aa.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt < 1:5397756/101‑1 (MQ=255)
a.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa > 1:5697934/1‑101 (MQ=255)
agggCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa < 1:6240183/99‑1 (MQ=255)
tGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa > 1:4361087/1‑101 (MQ=255)
tGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa > 2:5111777/1‑101 (MQ=255)
tGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa < 2:7571567/101‑1 (MQ=255)
tctgcA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAg < 2:2346446/98‑1 (MQ=255)
ggCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAg < 1:1532694/101‑1 (MQ=255)
ggCGCA..GCCAGAGGGGGG.CAGCG.CCTC.CCTGCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAg < 2:1532035/101‑1 (MQ=255)
cgcA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCt < 2:2604963/101‑1 (MQ=255)
gcA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAgaga > 1:2346513/1‑98 (MQ=255)
cA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTgg < 2:6621588/101‑1 (MQ=255)
ccAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCg > 1:8743714/1‑101 (MQ=255)
agagGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCa > 1:5232983/1‑101 (MQ=255)
agagGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCa > 1:1882767/1‑101 (MQ=255)
agagGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCa > 2:8654391/1‑101 (MQ=255)
gagGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCAt > 1:2849322/1‑101 (MQ=255)
gagGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCAt > 1:6753273/1‑101 (MQ=255)
gagGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCAt > 1:1410492/1‑101 (MQ=255)
|
TGCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCG.CC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCAT > NC_014034/2249279‑2249478
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|