BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	2,640,174	G→A	100%	intergenic (‑150/+126)	thrS ← / ← RCAP_rcc02462	threonyl‑tRNA synthetase/hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	2,640,174	0	G→A	100.0%	1001.4	382	intergenic (‑150/+126)	thrS/RCAP_rcc02462	threonyl‑tRNA synthetase/hypothetical protein
Reads supporting (aligned to +/- strand): new base (128/230): ref base (0/2): total (131/251)

Only 100 of 414 total aligned reads displayed.


GCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GG.CTT.CGGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCC  >  NC_014034/2640078‑2640272


 ggcCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCAcccc                                                                                                <  2:1043404/100‑1 (MQ=255)


    cGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCCGGCCCCCTC.TTAGG.CCT.TGGCCGATTCAccccccc                                                                                             >  1:151925/1‑100 (MQ=255)


     gggTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGa                                                                                            <  2:2314211/101‑1 (MQ=255)


        tATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCACCGAGGt                                                                                         <  1:3771759/101‑1 (MQ=37)


        tATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAA.AGGGGGCGCCGCCCCCCCCTTT.GC.CTT.CGGGCACTTCAccccccccggc                                                                                         >  2:3499191/1‑96 (MQ=255)


         aTGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTa                                                                                        <  1:2113084/101‑1 (MQ=255)


           gCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTAtt                                                                                      <  1:1672976/101‑1 (MQ=255)


           gCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTAtt                                                                                      <  1:2439273/101‑1 (MQ=255)


            cGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTAttt                                                                                     <  1:5538345/101‑1 (MQ=255)


            cGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTAttt                                                                                     <  1:818284/101‑1 (MQ=255)


             gACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTg                                                                                    <  2:5414428/101‑1 (MQ=255)


                 cggcggCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGagc                                                                                <  1:6479270/101‑3 (MQ=255)


                  ggcggcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCa                                                                               <  1:393037/101‑1 (MQ=37)


                  ggcggcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCa                                                                               <  1:1927899/101‑1 (MQ=37)


                    cggcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGAAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAg                                                                             <  2:6602884/101‑1 (MQ=25)


                     ggcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGa                                                                            <  2:3707554/101‑1 (MQ=37)


                     ggcAGGCGTGTCAACCGTGGCGATTTTGCGCATTCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGTCCAATTCACCCCCCGAGGTATTTGGAGCAAGa                                                                            <  1:4541409/101‑1 (MQ=21)


                       gaGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATg                                                                          <  2:8710104/100‑1 (MQ=37)


                       gaGGCGTGTCAACAGTGGCGCTTTTGCGCAGCCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTG.CGGGCAATTCTCCCCCCGAGGTATTTGGAGCAAGATg                                                                          <  1:105702/100‑1 (MQ=21)


                        aGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGa                                                                         <  2:529478/101‑1 (MQ=37)


                         ggCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaa                                                                        <  1:909152/101‑1 (MQ=25)


                          gCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaa                                                                       <  2:4307625/101‑1 (MQ=25)


                          gCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaa                                                                       <  1:3442538/101‑1 (MQ=25)


                             tgtCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCCATTCACCCCCCGAGGGATTTGGAGCGAGATGaaagac                                                                    >  2:2781385/1‑98 (MQ=25)


                              gtCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaagacc                                                                   <  2:2069674/101‑5 (MQ=25)


                               tCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGGGCTGCCCCCCCCTTT.GG.CTT.CGGCCCCTTCACCCCCCCCGGGATTTGGGGCAAGAAGAAAAAAca                                                                  >  1:4649149/1‑100 (MQ=255)


                                cAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCAt                                                                <  2:2383370/101‑1 (MQ=21)


                                 caCCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATg                                                               <  2:4783237/100‑1 (MQ=21)


                                 aaCCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATg                                                               <  1:2781611/101‑1 (MQ=25)


                                  aCCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATgg                                                              <  2:8268564/101‑1 (MQ=25)


                                  aCCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATgg                                                              <  2:6289534/101‑1 (MQ=21)


                                     gTGGCGCTTTTGCGCAGGCAAAAGGGGGGGGGCGCCCCCCCCC.TT.GC.CTTCCGGCCAA.TCACCCCCCCCGGCAGTTTGAGCGAGATCAAAA.ACCATGGGtt                                                           >  1:7501151/1‑101 (MQ=255)


                                     gTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGtt                                                           <  2:6832851/101‑1 (MQ=25)


                                     gTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.CT.GGCCTT.CGGCCAATTCACCCCCCGGGGTATTTGGAGCAAGATGaaaaacccttggtt                                                            >  1:3988390/1‑91 (MQ=18)


                                     gTGGCGCTTGTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGtt                                                           <  1:439316/101‑1 (MQ=21)


                                       ggCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCa                                                         <  2:5540963/101‑1 (MQ=25)


                                       ggCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCa                                                         <  1:7894871/101‑1 (MQ=25)


                                       gccgcTTTGCCGCCGGCAAGG.AGGGGCCGCGCCGCCCCTC.TT.GGCCTT.CGCCCAATTCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCa                                                         <  1:4243960/99‑1 (MQ=16)


                                         cgcTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTTATc                                                       <  1:492789/101‑1 (MQ=21)


                                          gcTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCt                                                      <  2:7145618/101‑1 (MQ=21)


                                           cTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCtt                                                     <  2:7009971/101‑1 (MQ=25)


                                             tttGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGc                                                   <  2:7390367/101‑1 (MQ=25)


                                               tGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCt                                                 <  1:6159898/101‑1 (MQ=25)


                                                   cAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCaaa                                             >  2:1252188/1‑101 (MQ=21)


                                                    aGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAat                                            <  2:2580534/101‑1 (MQ=21)


                                                     ggCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAata                                           <  1:7054335/101‑1 (MQ=21)


                                                     cccgaaa.AGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCCCCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAatat                                          <  1:1187043/97‑1 (MQ=17)


                                                     cccgaaa.AGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAatat                                          <  2:5972331/97‑1 (MQ=17)


                                                     cccgaaa.AGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAatat                                          >  2:8830258/5‑101 (MQ=17)


                                                      gCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAatat                                          <  2:1897949/101‑1 (MQ=21)


                                                       cgaaa.AGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATcc                                        >  2:4542344/3‑101 (MQ=17)


                                                       cAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATc                                         <  2:8102212/101‑1 (MQ=21)


                                                        gaaa.AGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGAC..GGGGTTTATCTTGCCCCAAATATccc                                       >  1:3313207/2‑101 (MQ=17)


                                                        gaaa.AGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATccc                                       <  1:3034239/100‑1 (MQ=17)


                                                        aaaa.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCCTGCCTCAAATATcc                                        <  1:7171778/101‑1 (MQ=21)


                                                        aaaa.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGGTCATCTTGCCTCCAATATcc                                        >  1:8035015/1‑101 (MQ=18)


                                                        aaaa.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGGATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATcc                                        >  1:5204422/1‑101 (MQ=21)


                                                         aaa.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATccc                                       <  2:3274006/101‑1 (MQ=25)


                                                         aaa.GGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGGTCATCTTGCCTCAAATATccc                                       >  2:8589697/1‑101 (MQ=21)


                                                         aaa.AGGGGGCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCg                                      >  2:3996887/1‑101 (MQ=17)


                                                            aagggggCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCggg                                    >  1:9169512/3‑101 (MQ=18)


                                                             ggggggCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCggg                                    >  1:8418753/1‑101 (MQ=21)


                                                             agggggCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggg                                   >  2:7574840/2‑101 (MQ=18)


                                                               ggggCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCggggg                                  <  1:3178952/101‑1 (MQ=25)


                                                                gggCGCTGCCCCCCTC.TT.GGCCTT.CGGCTAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCgggggg                                 <  2:780099/101‑1 (MQ=25)


                                                                gggCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtg                                <  2:3149139/101‑3 (MQ=18)


                                                                 ggCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtga                               >  1:6834317/1‑98 (MQ=21)


                                                                 ggCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtga                               >  2:3800358/1‑98 (MQ=18)


                                                                 ggCGCTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGa                                <  2:4645515/101‑1 (MQ=25)


                                                                    gcTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgaggc                            >  1:8864799/1‑95 (MQ=21)


                                                                     cTGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTcc                            >  2:647789/1‑101 (MQ=25)


                                                                     cTGCCCCCCTC.CT.GGCCTT.CGGCCAATTCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTcc                            <  1:5774876/101‑1 (MQ=25)


                                                                      tGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCt                           <  2:7912331/101‑1 (MQ=25)


                                                                      tGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCt                           >  2:4162317/1‑101 (MQ=25)


                                                                      tGCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCt                           >  2:1781353/1‑101 (MQ=25)


                                                                       gCCCCCCTC.TT.GGCCTT.CTGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTg                          <  1:6339846/101‑1 (MQ=25)


                                                                       gCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTg                          <  1:3640360/101‑1 (MQ=25)


                                                                       gCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTg                          <  1:1261088/101‑1 (MQ=37)


                                                                       gCCCCCCTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTg                          <  1:5737675/101‑1 (MQ=37)


                                                                         cccccTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaa                        >  2:3224775/1‑101 (MQ=25)


                                                                         atctctc.tT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaa                        <  2:5119532/97‑1 (MQ=25)


                                                                           cccTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAg                      >  1:281226/1‑101 (MQ=37)


                                                                            ccTC.TTGGG.CTT.TGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAgg                     <  2:8472702/101‑1 (MQ=25)


                                                                            ccTC.TT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAgg                     <  2:2997641/101‑1 (MQ=37)


                                                                               c.tT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACg                  >  1:1405691/1‑101 (MQ=37)


                                                                                  ttggccTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgg                 >  1:7661104/6‑101 (MQ=37)


                                                                                    ggccTT.CGGCCAATTCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgggg               <  1:8693197/98‑1 (MQ=37)


                                                                                     gccTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggggg              >  1:4711634/3‑101 (MQ=37)


                                                                                       cTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGc            <  2:5663938/101‑1 (MQ=255)


                                                                                       cTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTAATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGc            >  1:544283/1‑101 (MQ=37)


                                                                                         t.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCag          >  1:5089636/1‑101 (MQ=37)


                                                                                         t.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCag          >  2:2820391/1‑101 (MQ=37)


                                                                                         t.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCag          <  2:151925/101‑1 (MQ=255)


                                                                                           cGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCaga         >  1:2689729/1‑101 (MQ=255)


                                                                                            ggCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCagag        >  1:4831850/1‑101 (MQ=37)


                                                                                            ggCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCagag        <  1:5297458/101‑1 (MQ=255)


                                                                                              ccAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGCCCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcc      <  1:6561239/101‑1 (MQ=37)


                                                                                               cAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccc     >  1:7936033/1‑101 (MQ=37)


                                                                                                aaTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc    <  2:1111937/101‑1 (MQ=255)


                                                                                                  ttCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccccc  >  2:9118210/1‑101 (MQ=25)


GCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GG.CTT.CGGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCC  >  NC_014034/2640078‑2640272

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 25 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG