| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,640,204 | A→G | 13.0% | intergenic (‑180/+96) | thrS ← / ← RCAP_rcc02462 | threonyl‑tRNA synthetase/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,640,204 | 0 | A→G | 13.0% | 133.6 ‑3.6 ‑0.1 | 418 | intergenic (‑180/+96) | thrS/RCAP_rcc02462 | threonyl‑tRNA synthetase/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (33/21): ref base (160/199): total (194/224) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.79e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.82e-01 | ||||||||||
Only 100 of 478 total aligned reads displayed.
CGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GG.C.TT.CGGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCAGA > NC_014034/2640105‑2640304
|
cGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGGGCTGCCCCCCCC.CT.GGCC.CT.CGGCCCATTCCCCCCCCCAGGGATTTTGAGCCAGAAGaaaa > 1:5175079/1‑101 (MQ=255)
caCCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATg < 2:4783237/100‑1 (MQ=21)
aCCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATg..g < 2:8519836/101‑1 (MQ=25)
gTGGCGCTTTTGCGCAGGCAAAAGGGGGGGGGCGCCCCCCCCC.TT.GC.C.TTCCGGCCAA.TCACCCCCCCCGGCAGTTTGAGCGAGATCAAAA.ACCATG..GG..tt > 1:7501151/1‑101 (MQ=255)
gTGGCGCTTGTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..tt < 1:439316/101‑1 (MQ=21)
tGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGG.C.TT.CGGCCAATTCACCCCCCGAGGGATTTGGAGCAAGATG.AAAGACCCTG..GG..GTc > 1:2771956/1‑101 (MQ=21)
ggCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCa < 1:8619762/101‑1 (MQ=25)
gccgcTTTGCCGCCGGCAAGG.AGGGGCCGCGCCGCCCCTC.TT.GGCC.TT.CGCCCAATTCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCa < 1:4243960/99‑1 (MQ=16)
gcgcTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCAt < 2:789557/101‑1 (MQ=25)
gcgcTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCAt < 1:6736064/101‑1 (MQ=25)
cTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCtt < 2:7009971/101‑1 (MQ=25)
cTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCtt < 1:4678157/101‑1 (MQ=25)
ttttGCGCAGGCAAAC.GGGGGGCGCTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCACG..GG..TTCATCTTg < 2:6693678/101‑1 (MQ=21)
ttttGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCCCTTT.GC.C.TT.TGGCCAATTCACCCCCCCACGCATTTTGGGCAAAATG.AAAGAACATG..GG..GTCATCttc > 2:3776823/1‑100 (MQ=12)
tGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCt < 1:6159898/101‑1 (MQ=25)
tGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGAGGGATTTGGAGCCAGATG.AAAGACCAAG..GG..TTCATCTTGCCt > 2:2577157/1‑101 (MQ=21)
cgcAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCa < 2:6146053/101‑1 (MQ=21)
cAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCaaa > 2:1252188/1‑101 (MQ=21)
ggCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCGCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAata < 2:2811729/101‑1 (MQ=21)
cccgaaa.AGGGGGCGCTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GG..TTTATCTTGCCCCAAatat > 2:2694194/5‑101 (MQ=17)
gCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAatat > 1:7100347/1‑101 (MQ=21)
ccgaaa.AGGGGGCGCTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GG..TTTATCTTGCCCCAAATATc > 1:3090450/4‑101 (MQ=17)
cgaaa.AGGGGGCGCTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GG..TTTATCTTGCCCCAAATATcc > 2:4542344/3‑101 (MQ=17)
gaaa.AGGGGGCGCTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGAC..GG..GG..TTTATCTTGCCCCAAATATccc > 1:3313207/2‑101 (MQ=17)
aaa.AGGGGGCGCTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GG..TTTATCTTGCCCCAAATATCCCg > 1:7898947/1‑101 (MQ=17)
aaa.AGGGGGCGCTGCCCCCCTC.TT.GG.CTTT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GG..TTTATCTTGCCCCAAATATCCCg < 2:524788/101‑1 (MQ=18)
aa.GGGGGGCGCTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCg < 2:7566000/101‑1 (MQ=21)
a.GGGGGGCGCTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCgg < 2:5403377/101‑1 (MQ=25)
ggggggCGCTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCggg > 1:8418753/1‑101 (MQ=21)
ggggCGCTG.CCCCCTC.TT.GGCC.TT.TGGCCAATTC.ACCCCTGGGATATTTCGGGCAAGATGAA...ATCATGCCCC..TTCATCTTGCCGCAAATATCCCGGGGGGa < 2:3525400/101‑1 (MQ=2)
ggggCGCTG.CCCCCTC.TT.GGCC.TT.TGGCCAATTC.ACCCCTGGGATATTTCGGGCAAGATGAA...ATCATG..CCCCTTCATCTTGCCGCAAATATCCCGGGGGGa < 2:343243/101‑1 (MQ=2)
gggCGCTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GG..TTTATCTTGCCCCAAATATCCCgggggtg < 1:969375/101‑3 (MQ=18)
gggCGCTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GG..TTTATCTTGCCCCAAATATCCCgggggtg < 2:8851178/101‑3 (MQ=18)
gcgcTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GG..TTTATCTTGCCCCAAATATCCCgggggtgag < 1:3905923/101‑5 (MQ=21)
gcgcTGCCCCCCTC.GT.GGCC.TT.CGGCCAATTCGCCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GG..TTTATCTTGCCCCAAATATCCCgggggtgag < 1:6932700/101‑5 (MQ=18)
gcTGCCCCCCTC.TT.GGCC.TT.CGGGCAATTCACCCCCCGGGGTATTTTGAGCAAGAAG.AAAGAACATG..GG..GTCATCTTGCCTCCAATATCCCCGGGGGGGTc > 2:1721476/1‑101 (MQ=12)
gcTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGATGA....GG..TTTATCTTGCCCCAAATATCCCgggggtgaggc < 2:3269523/101‑7 (MQ=21)
gcTGCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTc > 2:4100169/1‑101 (MQ=25)
gCCCCCCTC.TT.GGCC.TT.CTGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTg < 1:6339846/101‑1 (MQ=25)
gCCCCCCTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTg < 1:3640360/101‑1 (MQ=25)
ccccccTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGa < 2:7368722/101‑1 (MQ=37)
cccccAC.CT.GGCC.TT.CGGCCAATTCACCCCACGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaa < 1:2927739/101‑1 (MQ=25)
ccccTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaaa > 1:1422510/1‑101 (MQ=37)
cccTC.TT.GGCC.TT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAg > 2:7141025/1‑101 (MQ=37)
ttggcc.TT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgg > 2:4649357/6‑101 (MQ=37)
tggcc.TT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggg > 1:8754458/5‑101 (MQ=37)
ggcc.TT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgggg > 2:5649680/4‑101 (MQ=37)
ggcc.TT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgggg > 2:4981206/4‑101 (MQ=37)
gcc.TT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggggg > 1:2032158/3‑101 (MQ=37)
t.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCag < 1:5809196/101‑1 (MQ=255)
t.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCag > 1:7725284/1‑101 (MQ=37)
t.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCag < 1:1764971/101‑1 (MQ=255)
ggCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCagag > 1:5033319/1‑101 (MQ=37)
ggCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCagag > 1:4831850/1‑101 (MQ=37)
aaTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc < 2:1111937/101‑1 (MQ=255)
aaTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGAACATG..GG..TTTATCTTGCCTCAAATATCTCGGGGGGAAACAGGAAAGGAGGGGGGGCACGGccca > 2:2931737/1‑100 (MQ=16)
aTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccccc > 1:1093358/1‑101 (MQ=37)
aTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccccc > 1:5471368/1‑101 (MQ=37)
ttCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTCCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccccc < 1:5409568/101‑1 (MQ=37)
ttCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccccc > 2:9118210/1‑101 (MQ=25)
ttCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccccc < 2:3188428/101‑1 (MQ=255)
tcaccccccGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCt > 1:1196910/4‑101 (MQ=25)
tcaccccccGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCt < 1:5725110/98‑1 (MQ=255)
tcaccccccGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCt > 2:2398873/4‑101 (MQ=25)
caccccccGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTc > 1:7289234/3‑101 (MQ=255)
caccccccGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTc > 1:2242472/3‑101 (MQ=255)
cccccccGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTcc < 1:2820490/100‑1 (MQ=255)
ccccccGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTccc < 1:3037537/101‑1 (MQ=255)
ccccccGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTccc < 2:8331401/101‑1 (MQ=255)
ccGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGt < 2:7947076/101‑1 (MQ=255)
gAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCt < 2:1423796/101‑1 (MQ=255)
aGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCtt < 2:4343866/101‑1 (MQ=255)
aGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCtt > 2:5114242/1‑101 (MQ=255)
ggTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCttt > 2:8158060/1‑101 (MQ=255)
ggTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCttt < 1:8258630/101‑1 (MQ=255)
tATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtct > 2:3881474/1‑101 (MQ=255)
aTTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtctc < 2:8754053/101‑1 (MQ=255)
aTTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtctc < 2:2338201/101‑1 (MQ=255)
ttGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCaa > 1:8001882/1‑101 (MQ=255)
tctgagcAAGATG.AAAGCCCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCaa < 2:6513311/95‑1 (MQ=25)
ggAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGc < 2:5464834/101‑1 (MQ=255)
gagcAAGATG.AACGACCATG..GG..TTCATCATGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCaaaga > 1:6513571/4‑98 (MQ=25)
gagcAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCg > 1:3727543/4‑101 (MQ=255)
gcAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCACGCGtt < 2:6235407/100‑1 (MQ=255)
gcAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGtt < 2:2080606/100‑1 (MQ=255)
cAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTc > 2:6319075/1‑101 (MQ=255)
cAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTc > 2:6815769/1‑101 (MQ=255)
cAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTc > 1:6572159/1‑101 (MQ=255)
aaGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTcc < 1:9050118/101‑1 (MQ=255)
aaGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTcc > 1:1341909/1‑101 (MQ=255)
aaGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTcc < 1:4584204/101‑1 (MQ=255)
aaGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTcc > 1:2570351/1‑101 (MQ=255)
agagtaaaGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCg < 2:4242161/96‑1 (MQ=255)
gatgaaaGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCgg < 2:3105355/97‑1 (MQ=255)
gatgaaaGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCgg > 2:5848926/5‑101 (MQ=255)
atgaaaGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGc > 1:3433116/4‑101 (MQ=255)
aaaGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCa > 1:523221/1‑101 (MQ=255)
aaaGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCa < 1:4132570/101‑1 (MQ=255)
aaGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCAg > 2:7749470/1‑101 (MQ=255)
aGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCAGa > 2:190916/1‑101 (MQ=255)
|
CGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TT.GG.C.TT.CGGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCAGA > NC_014034/2640105‑2640304
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 30 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|