| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,969,954 | C→G | 100% | intergenic (+105/+10) | RCAP_rcc02782 → / ← RCAP_rcc02783 | DegT/DnrJ/EryC1/StrS family aminotransferase/CoA‑binding domain‑containing protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,969,954 | 0 | C→G | 100.0% | 15.9 | 312 | intergenic (+105/+10) | RCAP_rcc02782/RCAP_rcc02783 | DegT/DnrJ/EryC1/StrS family aminotransferase/CoA‑binding domain‑containing protein |
| Reads supporting (aligned to +/- strand): new base (291/5): ref base (0/16): total (291/21) | ||||||||||
| Fisher's exact test strand distribution p-value = 7.81e-23 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.04e-06 | ||||||||||
Only 100 of 368 total aligned reads displayed.
GCCGCCCCGGTTCGGCGGGGGAAAGAGCGTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.CCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCCCGCCGCCCGCGCCCGCGCCGCCGCCTCGGGG > NC_014034/2969856‑2970054
|
ccgccCCGGTTCGGCGGGGGAAAGAGCGTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.gccc < 2:2313157/101‑1 (MQ=255)
cgccCCGGTTCGGCGGGGGAAAGAGCGTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.gcccc < 1:4629993/101‑1 (MQ=255)
gccCCGGTTCGGCGGGGGAAAGAGCGTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.gccccc < 2:8365069/101‑1 (MQ=255)
ccgggTTGGGGGGGGAAAAGAGCGTATTTGGGCCAAGAAAAACCCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCg < 1:820466/98‑1 (MQ=25)
ccGGTTCGGCGGGGGAAAGAGCGTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGc > 1:5144774/1‑101 (MQ=255)
cGGTGCGGCGGGGGAAAGAGCGTATTTGGCCCAAGAAAAACCCCC.GGGGTTTTTTCTGGGAAAAAA..TACGC.GGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGcc < 2:7639318/101‑1 (MQ=25)
gTTCGGCGGGGGAAAGAGCGTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTc > 1:6448058/1‑101 (MQ=255)
tCGGCGGGGGAAAGAGCGTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTcac > 1:7936385/1‑101 (MQ=255)
cggcggGGGAAAGAGCGTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTcaca > 1:8539663/1‑101 (MQ=255)
gggggggAAAGAACATGTTGTGAGCAAAAAAAACCCCC.GGGGTTTTTTCCTGGGAAAAA..TTAGG.GGGG.GGGTGG.GGGGGG...CAAACCCCCCCCGCCTCACAt < 2:7532836/99‑1 (MQ=255)
cggGGGAAAGAGCGTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATcc > 2:4460319/1‑101 (MQ=255)
cggGGGAAAGAGCGTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATcc > 1:1687238/1‑101 (MQ=255)
gggggAAAGAGCGTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGATAAA..TACGC.TGGG.GGGTAT.GGGCGG...CAAA.GCCCCCCGCCTCACATccc > 2:9045018/1‑101 (MQ=255)
ggggAAAGAGCGTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATcccc > 2:6176469/1‑101 (MQ=255)
ggAAAGAGCGTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAg > 2:8312001/1‑101 (MQ=255)
ggaaGGGCGTTTTTGGGGCAAAAAAAAACCCC.GGGGTTTTTTTTTTGGAAAAA..AACGCGGGGG.GGGTGG.GGGGGG...AAAACCCCCCCCGCCTCACATCCCCa < 2:3505296/99‑1 (MQ=255)
gAAAGAGCGTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGc > 1:4782139/1‑101 (MQ=255)
gAAAGAGCGTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGc > 1:6784927/1‑101 (MQ=255)
aaaGAGCGTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGcc > 1:5587622/1‑101 (MQ=255)
aaaGAGCGTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGcc > 2:3790884/1‑101 (MQ=255)
aaaGAGCGTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGcc > 1:2350588/1‑101 (MQ=255)
gagCGTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCcgcg > 1:8303345/1‑101 (MQ=255)
agCGTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCcgcgc > 2:4030992/1‑101 (MQ=255)
agCGTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCcgcgc > 1:1949198/1‑101 (MQ=255)
cGTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGa > 2:5409676/1‑101 (MQ=255)
cGTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGa > 2:8174503/1‑101 (MQ=255)
gTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTGACATCCCCAGCCGAGCGag > 2:4291897/1‑100 (MQ=255)
gTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGAt > 1:6343798/1‑101 (MQ=255)
gTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGAt > 1:7511717/1‑101 (MQ=255)
tATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGAtc > 1:2834302/1‑101 (MQ=255)
tATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGAtc > 1:4444438/1‑101 (MQ=255)
tATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGAtc > 1:1474812/1‑101 (MQ=255)
tttgtggacAAAAAAAAACCCCTGGGTTTTTTTCTTGGAAAAAA..AGGGG.GGGGTGGGTAG.GGGGGA...AAAC.CCCCCCCGCCTCACATCCCCAGCCGCGCGAt < 2:3267868/93‑1 (MQ=255)
aTTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGAtct > 1:4099965/1‑101 (MQ=255)
ttggggGCAAAAAAAACCCCG.GGGGTTTTTTTTTGGAAAAAA..GGCGG.GGGG.GGGGTG.GGGGGG...CAAACCCCCCCCGCCTCACATCCCCAGCCGCGCGAtct < 2:7186810/98‑1 (MQ=255)
tGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGa > 1:7883816/1‑101 (MQ=255)
ccAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGAtttt > 1:7042313/1‑101 (MQ=255)
ccAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGAttag > 2:2763225/1‑99 (MQ=255)
cAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTc > 1:688223/1‑101 (MQ=255)
cAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTc > 2:1504262/1‑101 (MQ=255)
aaaaaaaaACCC.GGGGGTTTTTTTTGTGAAAAA..AAGGG.GGGG.GGGGGG.GGGGGGGGACACC.CCCCCCCGCCTCACATCCCCAGGCGCGCGATCTCGAtttt < 1:5448853/99‑1 (MQ=255)
aGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCgg > 2:1997449/1‑101 (MQ=255)
gAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCggg > 1:4871090/1‑101 (MQ=255)
aaaaaaaCCCC.GGGGGGTTTTTTTTGGAAAAA..AAGGC.GGGG.GGGGGTGGGGGGG...CAAACCCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCg < 2:894555/100‑1 (MQ=255)
aaaaaCCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCa > 1:2277829/1‑101 (MQ=255)
aaaaaCCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCa > 2:1874104/1‑101 (MQ=255)
aaaaCCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGccg > 2:2848112/1‑99 (MQ=255)
aaaaCCCC.GCGGGTTTTTTTCGGGAAAAAATTGCGC.GGGG.GGGTGG.GGGGGC...CACC.CCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGc < 2:5242660/101‑1 (MQ=255)
aaaCCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGc > 2:1202475/1‑101 (MQ=255)
aaCCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTAGATTTTCGGGCAGCg > 2:8819811/1‑101 (MQ=255)
caccc.GGGGGTTTTTTTCGGGAAAAA..AAGGCGGGGG.GGGTGG.GGGGGG...CAAACCCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGc < 2:5089824/99‑1 (MQ=255)
aCCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCgg > 1:8733843/1‑101 (MQ=255)
cccc.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGt > 2:2361996/1‑101 (MQ=255)
ccc.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTc > 2:6670067/1‑101 (MQ=255)
c.GGGGTTTTTTTTAGGGAAAAA..AGCCG.GGGG.GGGTTG.GGGGGG...CAAACCCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTcc < 2:2648672/101‑1 (MQ=255)
c.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCa > 1:2074256/1‑101 (MQ=255)
c.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCa > 1:3870610/1‑101 (MQ=255)
gggggTTTTTTTTTGGAAAAAA..ATGGG.GGGG.GGGGGG.GGGGGG...CAAACCCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTcc < 1:5891723/100‑1 (MQ=255)
gggCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATc > 2:5756179/1‑101 (MQ=255)
cTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATcacc > 2:1393431/1‑101 (MQ=255)
tttttTTTGAAAAAAA..TGGGG.GGGG.GGGGGG.GGGGGG...AAAGCCCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATcacc < 1:7458725/101‑1 (MQ=255)
tttttCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCGACCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATcacca > 1:9085957/1‑101 (MQ=255)
tttttGGGAAAAA..TGGGG.GGGG.GGGGTG.GGGGGG...CAAACCCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACcaca < 1:4034377/98‑1 (MQ=255)
ttCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACaa > 2:2502151/1‑101 (MQ=255)
tCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAg > 2:2914801/1‑101 (MQ=255)
tCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAg > 1:767815/1‑101 (MQ=255)
cTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGc > 1:1235215/1‑101 (MQ=255)
cTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGc > 1:4991852/1‑101 (MQ=255)
ttGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCt > 1:3600853/1‑101 (MQ=255)
ttGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCt > 1:8993047/1‑101 (MQ=255)
tGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCtt > 1:2870994/1‑101 (MQ=255)
tGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCtt > 2:6249647/1‑101 (MQ=255)
gggAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCttc > 1:2722341/1‑100 (MQ=255)
ggAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CGAA.GCCGCCCGCCTCACATCCGCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGc > 2:5908345/1‑101 (MQ=255)
aaaa..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGcccc > 1:8426835/1‑100 (MQ=255)
aaaa..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCccg > 2:5625364/1‑101 (MQ=255)
aaaa..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCccg > 1:2807654/1‑101 (MQ=255)
aaa..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCccgc > 1:8910867/1‑101 (MQ=255)
aa..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCccgcc > 2:110853/1‑101 (MQ=255)
a..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCccgccg > 1:1765493/1‑101 (MQ=255)
aCGC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCCCgccgcc > 1:2387021/1‑101 (MQ=255)
gcggggg.gggGGT.GGGGGGC..CAAC.CCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCCCgccgcc < 2:6383571/97‑1 (MQ=255)
gC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCCCGccgcccg > 2:3012667/1‑101 (MQ=255)
gC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCCCGccgcccg > 2:6998974/1‑101 (MQ=255)
gC.TGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCCCGccgcccg > 2:3695698/1‑101 (MQ=255)
tGGG.GGGTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCCCGccgcccgcc > 2:6908333/1‑100 (MQ=255)
ggg.gggTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCCCGCcgcccgcgc > 2:6500225/1‑101 (MQ=255)
g.gggTGG.GGGGGG...AAGC.CCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCCCGCcgcccgcgccc < 2:4098332/101‑1 (MQ=255)
gggTAT.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCCCGCcgcccgcgcccg > 1:5987309/1‑101 (MQ=255)
t.GGGGGG...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCCCGCCGCCCGCGCCCGcgccg > 2:4804660/1‑101 (MQ=255)
gggggggg...CACC.CCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCCCGCCGCCcgcgcccgcgcc < 2:7922714/99‑1 (MQ=255)
gggg...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCCCGCCGCCCGCGCCCGcgccgccg > 1:1062817/1‑101 (MQ=255)
gg...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCCCGCCGCCCGCGCCCGCgccgccgcc > 2:3935101/1‑101 (MQ=255)
gg...CAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCCCGCCGCCCGCGCCCGCgccgccgcc > 1:1001588/1‑101 (MQ=255)
ggggccccccccccccGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCCCGCCGCCCGCGCCCGcgccgcc < 1:397055/92‑1 (MQ=255)
ggccccccccccccccGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCCCGCCGCCCGCGCCCGcgccgcc < 2:8742239/92‑1 (MQ=255)
gggccacccccccccGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCCCGCCGCCCGCGCCCGcgccgccg < 2:8512803/93‑1 (MQ=255)
cAAA.GCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCCCGCCGCCCGCGCCCGCGCCGCCGCCTc > 2:1733531/1‑101 (MQ=255)
acccccccccGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCCCGCCGCCCGCGCCCGCGCCGCCGCCTCg < 2:4556845/98‑1 (MQ=255)
cccccccGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCCCGCCGCCCGCGCCCGCGCCGCCGCCTCgggg < 2:6045547/101‑1 (MQ=255)
|
GCCGCCCCGGTTCGGCGGGGGAAAGAGCGTATTTGGGCCAAGAAAAAACCCC.GGGGCTTTTTCTTGGGAAAAA..TACGC.TGGG.GGGTAT.GGGGGG...CAAA.CCCCCCCGCCTCACATCCCCAGCCGCGCGATCTCGATTTTCGGGCAGCGGTCCATCACCACAAGCTTGCCCGCCGCCCGCGCCCGCGCCGCCGCCTCGGGG > NC_014034/2969856‑2970054
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 30 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|