| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,068,178 | C→A | 1.9% | intergenic (‑161/+131) | glcD ← / ← RCAP_rcc02872 | glycolate dehydrogenase, subunit GlcD/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,068,178 | 0 | C→A | 1.9% | 3.2 ‑3.3 ‑0.0 | 309 | intergenic (‑161/+131) | glcD/RCAP_rcc02872 | glycolate dehydrogenase, subunit GlcD/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (6/0): ref base (169/134): total (175/134) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.80e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.17e-01 | ||||||||||
Only 100 of 411 total aligned reads displayed.
ACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCGGGGAAAGGCA > NC_014034/3068078‑3068278
|
cGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCa > 1:2632500/1‑101 (MQ=255)
gATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCAt < 2:2807842/101‑1 (MQ=255)
aTGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATg > 2:3830128/1‑101 (MQ=255)
aTGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATg < 2:6005396/101‑1 (MQ=255)
tGGGCAGCCTGACCGAGGCCATCGCCGAGGCCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATgg < 1:2940178/101‑1 (MQ=255)
gggCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATggc > 1:8148026/1‑101 (MQ=255)
gggCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATggc > 2:1695092/1‑101 (MQ=255)
cAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATggc.ggg > 2:3232601/1‑101 (MQ=255)
aGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATggc.gggc > 2:1133179/1‑101 (MQ=255)
ccGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.Ttctc < 1:3014571/101‑1 (MQ=255)
ccGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.Ctctc > 2:8424230/1‑101 (MQ=255)
gAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.Ttctccc > 1:4938790/1‑99 (MQ=255)
gAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.Ttctccc > 1:6133416/1‑99 (MQ=255)
gAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTcgc < 2:2444130/101‑1 (MQ=255)
gAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTcgc > 2:7155858/1‑101 (MQ=255)
cATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTcgcccgcc > 1:4779698/1‑101 (MQ=255)
aTCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTcgcccgccc > 1:6355244/1‑100 (MQ=255)
cGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCcgg > 1:3362363/1‑101 (MQ=255)
gCCGAGGTCATGCGGACCAGAAGTCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCC.T.GCGCCCGCCCCGCCATCGGC.GGGGGC.GCCCcgccccccccgg > 1:7799811/1‑97 (MQ=18)
cGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGGCCGCCCCGCCCATGGC.GGGGGC.TTCTTGGCCGCCGgggcg > 2:4211547/1‑101 (MQ=18)
gAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGgggcgg > 1:2127396/1‑101 (MQ=255)
aGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGgggcggg > 1:605431/1‑101 (MQ=255)
aGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGgggcggg > 1:6936080/1‑101 (MQ=255)
ggTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGgggcgggg > 2:6923777/1‑100 (MQ=255)
gTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCCGggcgggcg > 1:5727189/1‑101 (MQ=255)
cATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGcc < 2:5849200/101‑1 (MQ=255)
cATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGcc > 1:619459/1‑101 (MQ=255)
aggCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCg < 2:6354995/99‑1 (MQ=255)
aTGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCg < 1:8891709/101‑1 (MQ=255)
aTGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCCGGGCGGGCGCCg > 2:3904493/1‑101 (MQ=255)
aTGCGGAACAGTGCCCTCGTGCCCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCg < 1:2397817/101‑1 (MQ=255)
ggAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGccc > 1:1696942/1‑100 (MQ=255)
aaCAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGGGCCCGccccc > 1:8012181/1‑98 (MQ=255)
acggTGGCCTCGTGCCCGCCGGGGGCCCAAGGCCCCTCGGCC.G.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTctg < 1:7592635/98‑1 (MQ=11)
cAGTGCCCTCGGGCCCGCCGGGGCCCCAAAGCCCCTCGGCC.G.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTctgc < 1:3215453/101‑1 (MQ=11)
ggaggCCCCGGGACCGCCGAGGGCCCAAAGGCCCGCGGCC.G.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTctgct < 1:3879383/98‑1 (MQ=14)
agaagtcccGTGACCGCCGGGGGCCCAAAGGCCCTCGGCC.T.GCGCCCGCCCCGCCATCGGC.GGGCGCGTTCCCGCCCCCCGGGGTGCGGGCCGGGCCctgc > 2:7411924/9‑101 (MQ=14)
aatGGCCCCGTGACCGGCGAGGGCCCAAAGGCCCTCGGCC.T.GCGCCCGCCCCGCCATCGGCGGGGGGC.GTCCCGCCGCCCGGGGCGGGCGGCggacccccg > 2:1615408/3‑94 (MQ=14)
aGTGGCCTCTTGACCGCGGGGGCCCCAAGGCCCCTCGGCC.G.CCGCCCGCCCCGCCGATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTctgct < 2:5708423/101‑1 (MQ=11)
tGGCCTCGTGCCCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCtgctgc < 1:1059178/101‑1 (MQ=255)
tGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCtgctgc > 1:7459814/1‑101 (MQ=255)
ggCCTCGGGCCCGCCGAGGCCCCAAGGCCCCGCGCCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTgcg < 1:2027913/101‑1 (MQ=14)
catgccagccgGGGGCCCAAAGGCCGCCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.CTCTCGCCCGCCCGGGCCGGGGGCGGGCCCGGGCGCGCCTgg > 2:205033/8‑101 (MQ=14)
cGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGGGCCGGCCTCTGCTGCGCCTgg > 1:355807/1‑101 (MQ=255)
cGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGGGCCGGCCCCTGCTGCGCCTgg > 1:1212456/1‑101 (MQ=255)
gcccgccgAGGGCCCAAGGCCCCTCGCCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGa < 1:2776043/99‑1 (MQ=255)
gcccgcccGGGCCCCAACGCCCCTCGCCC.G.CCCCCCGCCCCGCCCCTGGC.GGGCGT.TTCTCCCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGa < 2:1354777/99‑1 (MQ=9)
gccccggaggCCCCAGGGCCCCAGGCC.AGGCCCCCGCCCCGCCCGGGCC.GGGCGC.TTCCCGCCCGCCGGGGGGGGCGCCGGCCTCTGCTGCGCCTGGGGaa < 1:9196029/93‑1 (MQ=255)
ccgccgAGGCCCAAAGGGCCCTCGCCC.G.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGaaa < 2:1966920/101‑1 (MQ=17)
gccgGGGGCCCAAAGCCCCGCGGCC.G.GCCCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACg < 1:8280545/101‑1 (MQ=14)
gccgAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACg > 2:8930509/1‑101 (MQ=255)
gccgAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACg > 1:2881133/1‑101 (MQ=255)
gccgAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCCGGGGAAACg > 1:718811/1‑101 (MQ=255)
ccgGGGGCCCAAGGGCCCCCGGCC.G.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACgg < 1:1899389/101‑1 (MQ=17)
cccggggCCAAAAGGCCCCCGGCCGG.GGGCCCGCCCCGCCCATGCC.GGGCGC.TTCTCCCCCGCCGGGGCGGCCGCCGGCCTCTGCTGCGCCTGGGGAAACg < 1:412962/97‑1 (MQ=14)
cgAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGGGCCCGCCTCTGCCGCGCCTGGGGGAACggg > 2:3065889/1‑100 (MQ=17)
cgAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCCGCCTCTGCTGCGCCTGGGGGAACggg > 1:7737329/1‑100 (MQ=255)
gAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTGTCGCCCGCCGGGGGCGGCGCCCGCCGCCGCTGCGCCTCGGGAGACGGtg > 2:5599702/1‑100 (MQ=14)
gAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCCGGGGGAACGGTc > 1:6648065/1‑101 (MQ=255)
ggggCCAAAAGGCCCTCGGCC.G.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCt < 2:3687380/100‑1 (MQ=255)
aGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGGCt > 1:5460647/1‑101 (MQ=255)
gggCCAAAGGGCCCCCGGCC.A.GCGCCCCCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCtt < 1:509586/101‑1 (MQ=17)
ggccccAAAGCCCCGCGGCC.G.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCtt < 2:4935232/98‑1 (MQ=17)
ggCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGGGCCGGCCTCTGCTGCGCCTGGGGAGACGGGCTTg > 2:6055662/1‑101 (MQ=255)
ggCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGGGCCGGCCTCTGCCGCGCCTGGGGGAACGGGCTTg > 1:1839066/1‑101 (MQ=17)
gCCCAAGGGCCCGCGGCC.C.GCCCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTgg < 2:8277138/101‑1 (MQ=18)
cccAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGG.GGGCGC.TTCTCGCCCGCCGGGGCGAGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGc > 1:6573064/1‑101 (MQ=255)
ccAAGGGCCCTCGCCC.G.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCa < 2:7794016/101‑1 (MQ=255)
aaggccccTCGGCC.G.GCCCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCAcc < 2:5379155/96‑1 (MQ=255)
aaggccccGCGGCC.A.GCCCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCAcc < 2:681902/96‑1 (MQ=255)
aaaGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGGAACGGTCTTGGCAcc > 1:8779220/1‑101 (MQ=255)
aaaGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGGCTTGGCAcc > 1:6853436/1‑101 (MQ=255)
aGGCCCTCGCCC.G.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCACCGc < 1:379562/101‑1 (MQ=255)
ggCCCTGGCCC.A.GCGCCCGCCCCGCCCATGGG.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCACCGcc < 1:1409951/101‑1 (MQ=255)
ggCCCCCGGCC.G.GCGCCCCCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCACCGcc < 2:3332793/101‑1 (MQ=255)
gccccTCGCCC.G.GCGCCCGCCCCGCCCATGGC.GGCCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCACCGcc < 2:7600272/99‑1 (MQ=255)
gCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCCGCGCCTGGGGGAACCGTCTTGGCCCCCccc > 1:8956468/1‑101 (MQ=17)
ccccCCGCCC.G.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCACCGccc < 1:4429066/100‑1 (MQ=255)
tCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGGAACGGTCTTGGCACCGCCCGGGc > 2:8090717/1‑101 (MQ=255)
gagCC.A.CCTCCCCCCGCCCCCTTGGG.GGGCGC.TTCTCCCCCGCCGGGGGGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCACCGCCCGGGCt < 1:2275044/99‑1 (MQ=18)
cGGCC.A.GCGCCCGCCCCGCCCATGGT.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGGAACGGTCTTGGCACCGCCCGGGCt > 2:4563032/1‑101 (MQ=255)
cGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGGACCGCCCGGGCt > 1:8595220/1‑101 (MQ=255)
gcccggccccccccccgcCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCACCGCCCGGGCTc < 2:3026880/93‑1 (MQ=255)
gccgcccccccccccgcCCAGGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCACCGCCCGGGCTcc < 1:1733369/94‑1 (MQ=18)
cccgcgcCCCCCCCCCCCAGGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCACCGCCCGGGCTCcg < 2:8738662/98‑1 (MQ=18)
a.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCACCGCCCGGGCCCcggc > 1:5380447/1‑101 (MQ=255)
gcccgcccCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCACCGCCCGGGCTCCggcggg > 2:8315558/1‑101 (MQ=255)
ccccgcccAGGGG.GGGCCC.TTCTGGCCCGCGGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCgggg < 1:1609975/101‑1 (MQ=25)
ccccgcccAGGGC.GGGCGC.TTCTCGCCCGCGGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCgggg < 2:2588427/101‑1 (MQ=255)
ccccgcccAGGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCgggg < 1:7276671/101‑1 (MQ=255)
cgcccGTGCG.GGCCGT.TTCGCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCGGGGaaa < 2:5299247/101‑1 (MQ=25)
cgcccATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCGGGGaaa < 2:7058445/101‑1 (MQ=255)
cgcccAGGGC.GGGGGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCGGGGaaa < 1:3699668/101‑1 (MQ=255)
cgcccAGGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCGGGGaaa < 1:7644994/101‑1 (MQ=255)
gcccGTGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCGGGGAAAg < 2:8508090/101‑1 (MQ=255)
gcccATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCGGGGAAAg > 2:6543275/1‑101 (MQ=255)
cccATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCGGGGAAAgg > 1:8483835/1‑101 (MQ=255)
ccATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCGGGGAAAGGc > 2:370104/1‑101 (MQ=255)
cATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCGGGGAAAGGCa < 2:1854376/101‑1 (MQ=255)
cATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGGCTTGGCACCGCCCGGGCTCCGGCGGGCGGGGGAAGGCa > 2:351387/1‑101 (MQ=255)
|
ACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.A.GCGCCCGCCCCGCCCATGGC.GGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCTGGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCGGGGAAAGGCA > NC_014034/3068078‑3068278
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 22 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|