| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,439,794 | G→C | 3.2% | intergenic (‑97/+66) | RCAP_rcc03240 ← / ← mutB | ATPase AAA/methylmalonyl‑CoA mutase large subunit |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,439,794 | 0 | G→C | 3.2% | 12.8 ‑3.5 ‑0.0 | 343 | intergenic (‑97/+66) | RCAP_rcc03240/mutB | ATPase AAA/methylmalonyl‑CoA mutase large subunit |
| Reads supporting (aligned to +/- strand): new base (3/8): ref base (203/129): total (206/137) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.03e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.99e-01 | ||||||||||
Only 100 of 472 total aligned reads displayed.
TCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCCCGCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACG > NC_014034/3439694‑3439896
|
tCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTA.TTTGGGGGAAGAAAAAaggg > 1:361919/1‑101 (MQ=39)
tCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGGA.TTTTGGGGAAGAAAAAaggg > 1:7751015/1‑101 (MQ=255)
tCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGGA.TTTGGGGGAAGATAAAaggg > 1:9059745/1‑101 (MQ=255)
tCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGAA.TTTTGGGGAAGATAAAaggg > 2:8376165/1‑101 (MQ=255)
tGGCGGCGACCCTACACGGCGCGACCAGCGTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGGA.TTTTGGGGGAGATAAAAGGgg.tt > 2:6528789/1‑101 (MQ=255)
ggcggcGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGgc.ttt < 2:5777704/101‑1 (MQ=255)
ggcggcGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGgc.ttt < 2:4557784/101‑1 (MQ=255)
gcggcgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGgc.tttg < 1:5071146/101‑1 (MQ=255)
gcggcgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGgc.tttg < 2:3432869/101‑1 (MQ=255)
gcggcgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGgc.tttg < 1:2838814/101‑1 (MQ=255)
cggcgACCCTACACGGCGCGACCAGCTTGCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGgc.tttgc < 1:7960050/101‑1 (MQ=255)
ggcgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTATTTTGGGGGAGAAAAAAGGGgg.tttgt > 1:6343145/1‑100 (MQ=255)
ggcgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGGA.TTTTGGGCAAGAAAAACGGgc.tttggt > 1:7268934/1‑99 (MQ=255)
gcgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGgc.tttgctt < 2:3768663/101‑1 (MQ=255)
gACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCtttt < 2:2850977/101‑1 (MQ=255)
aCCCTACCCGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTa < 1:336593/101‑1 (MQ=255)
aCCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGGA.TTTTGGGGAAGATAAAAGGGG.GTTGCttttt > 1:1672717/1‑100 (MQ=255)
cccTACAGCGCGCGACACGCGTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTAt < 2:2972968/101‑1 (MQ=37)
cccTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGGA.TTTGGGGGAAGATAAAAGGGC.TTTGCtttttt > 1:5206304/1‑99 (MQ=255)
ccTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTA.TTTTGGGGAAGATAAAAGGGG.TTTGCttttttt > 2:7470312/1‑98 (MQ=255)
ccTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTA.TTTTGGGCAAGATAAAGGGGG.TTTGCTTTTAtt > 1:2341124/1‑100 (MQ=255)
cTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTA.TTTGGGGGAAGATAAAGGGGG.TTTGCTTTTTTCt > 1:2442788/1‑101 (MQ=39)
cTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGAA.TTTTGGGCAAGGTAAAAGGGG.TTTGTTTTTTTCt > 1:2205568/1‑101 (MQ=255)
cTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCt < 1:8879657/101‑1 (MQ=255)
tACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCtt < 1:6132911/101‑1 (MQ=255)
acacGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCtt.t < 1:8643493/101‑1 (MQ=255)
cacGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTGCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.Tc < 2:1060743/101‑1 (MQ=255)
cacGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.Tc < 1:7525142/101‑1 (MQ=255)
cGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.Tccc < 1:809732/101‑1 (MQ=255)
cGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGAGAAGATAAAGGGGC.TTTGCTTTTTTCTT.Tccc > 2:6756948/1‑101 (MQ=255)
cgcgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCaa < 2:2525773/101‑1 (MQ=255)
ggtccAGCTTTCTAAAGACAGGAAGTCGGCCTGCGGCTGATTCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTCCTTTTATCTT.TCCCCAAat < 2:4975315/98‑1 (MQ=37)
cgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAat < 1:407693/101‑1 (MQ=255)
cgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAat < 2:3286458/101‑1 (MQ=255)
cgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAat < 1:6823556/101‑1 (MQ=255)
cgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAat < 2:8011075/101‑1 (MQ=255)
aCCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAata.t < 1:3724368/101‑1 (MQ=255)
cAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.cc < 2:1579261/101‑1 (MQ=255)
aGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.ccc < 2:6433093/101‑1 (MQ=255)
aGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGAAA.TTTGGGGGAAGATAAAGGGGC.TTTGCTTTTATCTT.TTCCCAAATA.T.ccc > 1:5589487/1‑101 (MQ=255)
tttCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCACATA.T.CCCggg > 2:5467548/1‑101 (MQ=255)
tttCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAAGGGC.TTTTCTTTTTTCTT.TTCCCCAAAA.T.TCCggg > 1:5883538/1‑101 (MQ=37)
ttCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTA.TTTTGGGGAAGATAAAGGGGG.TTTGCTTTTTTTTT.TCCCCCAATA.T.CCCcggg > 1:9192619/1‑101 (MQ=255)
ttCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTTGGGCAAGAAAAAAGGGG.TTTGCTTTTTTCTT.TCCCCAAATA.T.TCCgggg > 2:3189718/1‑101 (MQ=38)
tCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGGAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.ACCggggg > 2:4283642/1‑101 (MQ=255)
cGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGt < 2:2274518/101‑1 (MQ=255)
cGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAAGGGC.TTTGGTTTTTTCTT.TCCCCCAATA.TAACCggggg > 2:437850/1‑101 (MQ=37)
gAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCggggggg > 1:4937359/1‑99 (MQ=255)
gAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGGA.TTTTGGGGGAGATAAAAGGGG.GTTGCTTTTTTCTT.TTCCCCAATATT.CCCgggggg > 2:1893881/1‑100 (MQ=255)
gAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGGAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCcgggggg > 2:2057967/1‑99 (MQ=255)
gAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGG.TTTGCTTTTTTCTT.TTCCCAAATA.T.ACCggggggg > 2:4802830/1‑99 (MQ=38)
gAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTg < 2:8286717/101‑1 (MQ=255)
aaaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGc < 1:4360606/101‑1 (MQ=255)
aaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..g < 1:1355211/101‑1 (MQ=255)
aGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTA.TTTTGGGGAAGATAAAGGGGC.TTTGCTTTTATTTT.TCCCCCAAAA.T.CCCGGGGGGGC..gg > 1:2269451/1‑101 (MQ=255)
gACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..ggg < 2:8667106/101‑1 (MQ=255)
aCAGGGATTCGGCCTGCGGCCGATGCCTCCGGCGGGGAAA.TTTGGGGCAAGATAAAGGGGG.TTTGCTTTTTTTTT.TCCCCAAAAA.T.CCCGGGGGGGC..gggg > 1:5453641/1‑101 (MQ=37)
gAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCag < 1:3138952/101‑1 (MQ=255)
aTTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCag.ag < 2:6216567/101‑1 (MQ=255)
cGGCCTGCGGCCGATGCCTCCGGCGGGGGTA.TTTGGGGGAAGATAAAGGGGG.TTTGCTTTTATTTT.TTCCCAAAAA.T.CCCGGGGGTGC..GGGGGGAG.GGcgc > 2:4483840/1‑99 (MQ=25)
gCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCCAATA.T.CCCGGGGGTGC..GGGGGCAG.AGccccc > 2:7110040/1‑101 (MQ=255)
ccTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCGCCcg < 2:788429/101‑1 (MQ=255)
tgactttcGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATGAA.ACCC.ATCCCTTTCATCTT.GCCCCAAATA.T.CCCGGGGGGCCCGGGGGGCAG.CGcccccc < 1:4760667/94‑2 (MQ=25)
tgactttcGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATGAA.ACCC.ATCCCTTTCATCTT.GCCCCAAATA.T.CCCGGGGGGCCCGGGGGGCAG.CGcccccc < 1:66026/94‑2 (MQ=25)
ggCCGATGCCTCCGGCGGGGATA.TTTGGGGGAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCCAATA.T.CCCGGGGGGGC..GGGGGCAG.AGCCCCcgccgcc > 1:8241177/1‑97 (MQ=21)
ccGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCCcgccgcccc > 2:8796533/1‑95 (MQ=255)
aTGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGGGC..GGGGGCAG.AGCCCCCGcccccacggt > 2:8077167/1‑95 (MQ=18)
gCCTCCGGCGGGGATA.TTTGGGGGGAGATAAAAGGGG.TTTGCTTTTATCTT.TTCCCCAATA.T.ACCCGGGGTGC..GGGGGCAG.GGGCCCC.C.CCGCCACgggtt > 2:1740689/1‑98 (MQ=16)
cTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCGCGGTTCAc > 2:2544888/1‑101 (MQ=255)
ccGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTCAcgc > 1:7868494/1‑101 (MQ=255)
ggcggGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTCAcgccg > 1:9004591/1‑101 (MQ=255)
ggggATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTCACGCCGCGa > 1:1030055/1‑101 (MQ=255)
ggggATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTCACGCCGCGa > 1:8737506/1‑101 (MQ=255)
ggATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTCACGCCGCGAcc > 1:124399/1‑101 (MQ=255)
ta.tTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTCACGCCGCGACCGtc > 1:459610/1‑101 (MQ=255)
tttgtGGGGGAAGGAAAGGGGGT.TTTTTTTTTTTCTC.CCCCCAAATG.G.CGGGGGGGGGG..GGGGGGCG..GCCCCCCCGCCGCCACGGTTCACGCCGCGACCGt < 1:5827622/97‑1 (MQ=255)
gttGGGGAAAAAAAAAGGGG..TTTTTTTTTTTTTC.TCCCCCAAAA.T.CCGGGGGGGGG..GGGGGGCC.CGCCCCCCCGCCGCCACGGTTCACGCCGCGACCGtct < 1:7132452/100‑1 (MQ=255)
ttGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTcc > 2:1262745/1‑101 (MQ=255)
tGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCg > 2:3995226/1‑101 (MQ=255)
tGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCg > 2:2704565/1‑101 (MQ=255)
gtggggaaagaaaGGGGCGTTTGGTTTT.TCTTCTCCCAAAATA...CGCGGGGG.GC..GGGGGGGGCAGCCCCCCCGCCGCCACGGTTCACGCCGCGACCGTCTcc < 2:3560719/91‑1 (MQ=255)
gggCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCggg > 1:7057766/1‑101 (MQ=255)
cAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTc > 1:1865527/1‑101 (MQ=255)
cAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTc > 1:85075/1‑101 (MQ=255)
aaGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCg > 1:8418280/1‑101 (MQ=255)
gATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGcc > 2:5554921/1‑101 (MQ=255)
aTAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGTGTCGCCa > 2:2201465/1‑101 (MQ=255)
aTAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCa > 2:8628076/1‑101 (MQ=255)
aTAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCa > 2:901848/1‑101 (MQ=255)
aTAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCa > 1:2907221/1‑101 (MQ=255)
aTAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGGCGCCa > 2:5831053/1‑101 (MQ=255)
tAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAg > 2:5951553/1‑101 (MQ=255)
tAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAg > 2:5363413/1‑101 (MQ=255)
tAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAg > 1:2036226/1‑101 (MQ=255)
gatgggggC.GTTTTTTTTTTTTT.TCCCCAAAAA.T.GCCGGGGGGGG..GGGGGGGC.GCCCCCCCCCCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGcc < 2:1477740/97‑1 (MQ=255)
aaaGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgc > 2:7315059/1‑101 (MQ=255)
aaGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgcg > 2:668987/1‑101 (MQ=255)
aaGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgcg > 2:4139268/1‑101 (MQ=255)
aGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTTACGCCGCGAACGTCTCGGTGGCAGCCAgcgg > 2:6936794/1‑100 (MQ=18)
ggC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGcgac > 2:767839/1‑101 (MQ=255)
|
TCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGC.TTTGCTTTTATCTT.TCCCCAAATA.T.CCCGGGGGTGC..GGGGGCAG.AGCCCCCGCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACG > NC_014034/3439694‑3439896
Base quality scores:
ATCG
< 3 ≤
ATCG
< 17 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|