| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,420,306 | Δ1 bp | 2.4% | intergenic (‑100/+92) | RCAP_rcc02245 ← / ← cysE2 | major membrane protein I/serine O‑acetyltransferase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,420,306 | 0 | G→. | 2.4% | 9.9 ‑2.4 ‑1.4 | 252 | intergenic (‑100/+92) | RCAP_rcc02245/cysE2 | major membrane protein I/serine O‑acetyltransferase |
| Reads supporting (aligned to +/- strand): new base (5/1): ref base (103/143): total (108/144) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.69e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.61e-02 | ||||||||||
Only 100 of 254 total aligned reads displayed.
AGCCAGCGCGGCAGTGATCGTGGGCCAGGATACGGCGCCCGTCTTCGTGGCATTGGCAAAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAGTTTGACACCGGTTCGGTCATTCACGTTCTCCTTCTTGGGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGCAGGTTGAAAATGTGTTCTG > NC_014034/2420208‑2420395
|
agccagcGCGGC.GTGATCGTGGG.CAGGAT.CGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGt < 1:2327604/101‑1 (MQ=255)
agccagcGCGGC.GTGATCGTGGG.CAGGAT.CGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGt < 1:973828/101‑1 (MQ=255)
agccagcGCGGC.GTGATCGTGGG.CAGGAT.CGGCG.ACGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGt > 2:4138987/1‑101 (MQ=255)
gccagcGCGGC.GTGATCGTGGG.CAGGAT.CGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTc < 2:5101777/101‑1 (MQ=255)
gccagcGCGGC.GTGATCGTGGG.CAGGAT.CGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTc < 2:262687/101‑1 (MQ=255)
accagcGCGGC.GTGATCGTGGG.CAGGAT.CGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTc < 2:1861390/100‑1 (MQ=255)
cagcGCGGC.GTGATCGTGGG.CAGGAT.CGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCAt > 1:3131157/1‑101 (MQ=255)
cagcGCGGC.GTGATCGTGGG.CAGGAT.CGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCAt > 2:330508/1‑101 (MQ=255)
gcgcGGC.GTGATCGTGGG.CAGGAT.CGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTc < 2:3863621/101‑1 (MQ=255)
gcgcGGC.GTGATCGTGGG.CAGGAT.CGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTc < 1:5173509/101‑1 (MQ=255)
ggcgTGATCGTGGG.CAGGAT.CGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGt < 1:254362/98‑1 (MQ=255)
gcgTGATCGTGGG.CAGGAT.CGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGtt < 2:2079987/99‑1 (MQ=255)
gTGATCGTGGG.CAGGAT.CGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTtct > 1:2921666/1‑101 (MQ=255)
gTGATCGTGGG.CAGGAT.CGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTtct < 2:3609627/101‑1 (MQ=255)
tGATCGTGGG.CAGGAT.CGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTtctc < 1:146792/101‑1 (MQ=255)
ctaTCGTGGG.CAGGAT.CGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTtctc < 2:3651188/99‑1 (MQ=255)
gATCGTGGG.CAGGAT.CGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTcc > 1:1819779/1‑101 (MQ=255)
aTCGTGGG.CAGGAT.CGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCCG.TTGAC.GCGGTTCGGTCATTCACGTTCTCct > 1:238375/1‑101 (MQ=255)
aTCGTGGG.CAGGAT.CGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTtctcag > 1:3651416/1‑99 (MQ=255)
aTCGTGGG.CAGGAT.CGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCct < 1:5660246/101‑1 (MQ=255)
tCGTGGG.CAGGAT.CGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCctt < 1:1850176/101‑1 (MQ=255)
gTGGG.CAGGAT.CGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCcttct < 1:3798971/101‑1 (MQ=255)
gTGGG.CAGGAT.CGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCcttct < 1:17419/101‑1 (MQ=255)
gggcAGGAT.CGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTTg < 2:4843253/98‑1 (MQ=255)
cAGGAT.CGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTTgggt < 2:2696531/101‑2 (MQ=255)
cAGGAT.CGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTTgggt < 1:4060733/101‑2 (MQ=255)
aggatcGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTTgggtg > 1:344380/6‑99 (MQ=255)
ggatcGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTTgggtgc < 1:5772006/97‑4 (MQ=255)
ggatcGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTTgggtgc > 1:744271/5‑98 (MQ=255)
atcGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAg < 2:1113647/99‑1 (MQ=255)
atcGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAg < 1:1012218/99‑1 (MQ=255)
atcGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAg > 2:3264152/3‑101 (MQ=255)
atcGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCATTCTT.GGGTGCAg < 1:2090248/99‑1 (MQ=255)
tcGGCG.CCGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGa < 1:1946602/100‑1 (MQ=255)
ggcgccGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGaaa < 1:4553023/97‑1 (MQ=255)
gcgccGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGaaaa > 1:4282339/4‑101 (MQ=255)
cgccGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAAc > 1:5272689/3‑101 (MQ=255)
gccGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAAcc < 2:3148404/100‑1 (MQ=255)
ccGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCa < 2:3088690/101‑1 (MQ=255)
cGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCAt < 2:2034178/101‑1 (MQ=255)
cGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCAt < 2:3925920/101‑1 (MQ=255)
cGTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCAt > 1:5281108/1‑101 (MQ=255)
gTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATc < 1:1119349/101‑1 (MQ=255)
gTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATc < 1:4398928/101‑1 (MQ=255)
gTCTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATc < 1:37104/101‑1 (MQ=255)
cTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATccc > 1:4246866/1‑101 (MQ=255)
cTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATccc < 2:4658784/101‑1 (MQ=255)
cTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATccc < 2:1212569/101‑1 (MQ=255)
cTTCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATccc > 1:974961/1‑101 (MQ=255)
tCGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGCTCTCCTTCTT.GGATGCAGAAAACCATccctc > 1:1358247/1‑99 (MQ=255)
cGTGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCCGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCcgcg > 1:570584/1‑101 (MQ=255)
tGGCATTGGC.AAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGa > 1:3082437/1‑101 (MQ=255)
tggcaaGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGcgcc < 2:4293564/97‑1 (MQ=255)
tggcaaGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGcgcc > 2:5361122/5‑101 (MQ=255)
tggcaaGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGcgcc < 1:891067/97‑1 (MQ=255)
tggcaaGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGcgcc < 1:606841/97‑1 (MQ=255)
tggcaaGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGcgcc < 1:3381873/97‑1 (MQ=255)
caaGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCcgcg < 2:1784645/100‑1 (MQ=255)
aGCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCggg < 2:776996/101‑1 (MQ=255)
gCTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGa < 2:4558555/101‑1 (MQ=255)
cTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGAt > 2:1273774/1‑101 (MQ=255)
cTGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGAt < 2:472741/101‑1 (MQ=255)
tGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGAtt < 2:2921499/101‑1 (MQ=255)
tGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGAtt > 2:1539601/1‑101 (MQ=255)
tGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGAtt < 2:5647076/101‑1 (MQ=255)
tGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGAtt < 1:384032/101‑1 (MQ=255)
tGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGAtt > 1:399262/1‑101 (MQ=255)
tGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGAtt < 2:5070904/101‑1 (MQ=255)
tGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGAtg > 2:2844243/1‑100 (MQ=255)
tGGCGGGCGGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGGCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGAtt > 1:1642355/1‑101 (MQ=255)
ggcgggcgGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTg < 2:5684383/101‑1 (MQ=255)
ggcgggcgGCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTg < 1:2108205/101‑1 (MQ=255)
gcgggcggCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTgg < 1:905233/101‑1 (MQ=255)
cgggcggCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGc < 1:3204016/101‑1 (MQ=255)
cgggcggCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGc < 2:1664858/101‑1 (MQ=255)
gggcggCACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGCa < 1:1402852/101‑1 (MQ=255)
ggcggcACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGCAg > 1:1092081/1‑101 (MQ=255)
gcggcACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGCAgg < 1:5524420/101‑1 (MQ=255)
gcggcACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGCAgg < 1:330552/101‑1 (MQ=255)
cggcACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGCAGGt < 1:4191115/101‑1 (MQ=255)
cggcACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGCAGGt < 2:2528491/101‑1 (MQ=255)
cggcACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGCAGGt < 2:687755/101‑1 (MQ=255)
ggcACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGCAGGtt < 2:5546956/101‑1 (MQ=255)
ggcACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGCAGGtt < 2:193700/101‑1 (MQ=255)
ggcACTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGCAGGtt < 2:3442054/101‑1 (MQ=255)
aCTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGCAGGTTGaa < 2:5280818/101‑1 (MQ=255)
aCTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGCAGGGTGaa > 1:1042070/1‑101 (MQ=255)
cTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGCAGGTTGaaa > 2:918874/1‑101 (MQ=255)
cTGTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGCAGGTTGaaa > 2:5789356/1‑101 (MQ=255)
gTCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGCAGGTTGAAAAt > 2:2207943/1‑101 (MQ=255)
tCGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGCAGGTTGAAAAtg < 2:3014861/101‑1 (MQ=255)
cGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGCAGGTTGAAAAtgt < 1:549319/101‑1 (MQ=255)
cGCCCAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGCAGGTTGAAAAtgt < 2:1580574/101‑1 (MQ=255)
cccAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGCAGGTTGAAAATgtgt < 1:4797295/101‑1 (MQ=255)
ccAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCACGGGATTGGCAGGTTGAAAATGTGtt > 1:3479244/1‑101 (MQ=255)
ccAGCGCCAG.TTGAC.GCGGTTCGGTCATTCACGTTCTCCTT.TTTGGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGCAGGTTGAAAATGTGtt > 1:2536540/1‑101 (MQ=255)
aGCGCCAG.TTGACG.CGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGCAGGGTGAAAATGTGTTCt > 2:1308744/1‑101 (MQ=255)
gcgcCAG.TTGACG.CGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGCAGGTTGACAATGTGTTCtt > 2:4351673/1‑100 (MQ=255)
gcgcCAG.TTGACG.CGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGCAGGTTGAAAATGTGTTCtg < 1:1201341/101‑1 (MQ=255)
gcgcCAG.TTGACG.CGGTTCGGTCATTCACGTTCTCCTTCTT.GGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGCAGGTTGAAAATGTGTTCtg > 1:2696660/1‑101 (MQ=255)
|
AGCCAGCGCGGCAGTGATCGTGGGCCAGGATACGGCGCCCGTCTTCGTGGCATTGGCAAAGCTGGCGGGCGGCACTGTCGCCCAGCGCCAGTTTGACACCGGTTCGGTCATTCACGTTCTCCTTCTTGGGGTGCAGAAAACCATCCCGCGGACGCGCCGCGGGATTGGCAGGTTGAAAATGTGTTCTG > NC_014034/2420208‑2420395
Base quality scores:
ATCG
< 3 ≤
ATCG
< 21 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 40 ≤
ATCG
|