| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,606,445 | Δ1 bp | 4.2% | intergenic (+6/+28) | xthA1 → / ← nahG | exodeoxyribonuclease III/salicylate hydroxylase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,606,445 | 0 | C→. | 4.2% | 20.0 ‑0.7 ‑0.0 | 215 | intergenic (+6/+28) | xthA1/nahG | exodeoxyribonuclease III/salicylate hydroxylase |
| Reads supporting (aligned to +/- strand): new base (6/3): ref base (108/97): total (115/100) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.07e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.52e-01 | ||||||||||
Only 100 of 282 total aligned reads displayed.
CCGATCTGTTGCGCGATGCGGGCATCGACAAGGAGGTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAAACGGCCCAGGATCTTGCCCGGCGCAATC > NC_014034/2606345‑2606545
|
cGATCTGTTGCGCGATGCGGGCATCGACAAGGAGGTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.cc < 2:2758794/101‑1 (MQ=255)
gATCTGTTGCGCGATGCGGGCATCGACAAGGAGGTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.ccc > 2:305080/1‑101 (MQ=255)
aTCTGTTGCGCGATGCGGGCATCGACAAGGAGGTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.cccc < 1:5644415/101‑1 (MQ=255)
aTCTGTTGCGCGATGCGGGCATCGACAAGGAGGTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.cccc < 1:2026578/101‑1 (MQ=255)
tGTTGCGCGATGCGGGCATCGACAAGGAGGTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.ccccccc < 1:2830550/101‑1 (MQ=255)
tGTTGCGCGATGCGGGCATCGACAAGGAGGTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.ccccccc > 2:2887325/1‑101 (MQ=255)
tgcgggggtggggCATCGAAAAGGGGGTCCGCGCGGGCGAGAAACCCTCGGGCCATGTCCCGGTCTGGATCGATCTGGGCGCCTGAGAC.GG.cccccccccc < 2:1305847/91‑1 (MQ=255)
gcgcGATGCGGGCATCGACAAGGAGGTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCg < 2:3191143/101‑1 (MQ=255)
cgcgATGCGGGCATCGACAAGGAGGTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.cccccccccgct < 1:1734233/101‑4 (MQ=255)
gcgATGCGGGCATCGACAAGGAGGTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCCCt > 1:5564958/1‑101 (MQ=255)
aTGCGGGCATCGACAAGGAGGTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTgg > 2:3445331/1‑101 (MQ=255)
aTGCGGGCATCGACAAGGAGGTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTgg < 1:5067331/101‑1 (MQ=255)
tGCGGGCATCGACAAGGAGGTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGc > 2:1878030/1‑101 (MQ=255)
gCGGGCATCGACAAGGAGGTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCt > 1:3213455/1‑101 (MQ=255)
ggCATCGACAAGGAGGTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGcc < 1:4850974/101‑1 (MQ=255)
ggCATCGACAAGGAGGTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGcc > 1:1312093/1‑101 (MQ=255)
gCATCGACAAGGAGGGCCGGGCGGGCGAGAAACCCTCGGACCATGTCCCGGGCTGGAGCGATCTGGACGCCTGAGCC.GG.CCCCCCCCCCGCTTGGCTGCcg < 1:16234/101‑1 (MQ=255)
cATCGACAAGGAGGTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCcgc > 1:1937293/1‑101 (MQ=255)
cATCGACAAGGAGGTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCcgc > 2:3702044/1‑101 (MQ=255)
aTCGACAAGGAGGTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGcgccg > 1:1877325/1‑97 (MQ=255)
aTCGACAAGGAGGTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG..CCCCCCCCCGCTTGGCTGCCGCgg > 2:764502/1‑101 (MQ=255)
cGACAAGGAGGTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGc > 1:2740261/1‑101 (MQ=255)
gcAAGGAGGGCCGGGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTc < 2:3393898/100‑1 (MQ=255)
aggcggTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTa < 2:4572644/101‑1 (MQ=255)
gaggTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG..CCCCCCCCCGCTTGGCTGCCGCGGCTCCTAttt > 2:1702745/1‑101 (MQ=255)
gaggGCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTAtt < 2:449086/101‑1 (MQ=255)
aggTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCcgcgccgccacttc > 2:3490210/1‑91 (MQ=255)
aggTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTAttt < 2:4418711/101‑1 (MQ=255)
aggTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.ACCCCCCCCCGCTTGGCTGCCGCGGCCCCTAttt > 1:4988218/1‑101 (MQ=255)
aggGCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTAttt < 2:2922694/101‑1 (MQ=255)
ggTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTc > 1:5028442/1‑101 (MQ=255)
gTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTcc > 2:866899/1‑101 (MQ=255)
tCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCcg < 1:2243165/101‑1 (MQ=255)
ccGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCcgc < 1:1472394/101‑1 (MQ=255)
ccGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCcgc > 1:3799552/1‑101 (MQ=255)
ccGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCcgc > 1:3236223/1‑101 (MQ=255)
cgcgcgGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCTGCGGCTCCTATTTCcggg > 2:3848502/1‑99 (MQ=255)
gcgggGGCGAAAAACCCCCGAGCCTTCACCCGTTAGGGATCGATCTGGCCCCCCG.GACGGG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCgcgg < 2:5703470/101‑1 (MQ=255)
ggggCGAGAAACCCCCGGGCCATGGCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGgcgc < 2:4617650/100‑1 (MQ=255)
gggCGAGAAACCCTCGGACCATGCCCCGGTCTGGATCGATCTGGACCCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGcc < 2:5280260/101‑1 (MQ=255)
ggCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCg < 1:2316642/101‑1 (MQ=255)
gagaAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTcc > 2:658810/1‑100 (MQ=255)
agaAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCAc < 1:305113/101‑1 (MQ=255)
agaAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCAc > 1:4119254/1‑101 (MQ=255)
cTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTgg < 2:4240581/101‑1 (MQ=255)
tCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGGCACCTCGTGGc > 1:1976010/1‑101 (MQ=255)
tCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCCTTTTCCGCGGCGCCGTCCcgcccgggc > 2:5218293/1‑94 (MQ=255)
cGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGcc < 2:388726/101‑1 (MQ=255)
cGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGcc < 1:4613506/101‑1 (MQ=255)
ggACCATGTCCGGGTCGGGATCGATCTGGCCGCCTGAGCC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCa < 2:1086739/101‑1 (MQ=255)
ggACCATGTCCCGGTCTGGATCGATCTGGACGCCGGAGAC.GG..CCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCAt < 2:1192610/101‑1 (MQ=255)
aCCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAT.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATa < 1:4034680/101‑1 (MQ=255)
aCCATGTCCCGGTCGGGATCGATCTGGCCGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATa < 2:36498/101‑1 (MQ=255)
ccATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAg < 1:2755002/101‑1 (MQ=255)
cATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGa > 1:2909108/1‑101 (MQ=255)
cATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACCTCGTGGCCATAGa > 2:5620168/1‑101 (MQ=255)
cATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCCCCGTCCCGTCGTGGCCATAGa > 2:5562539/1‑101 (MQ=255)
aTGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGCCACGTCGTGGCCATAGAc > 1:4365620/1‑101 (MQ=255)
tGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCCCGGGGCCGTCACGTCGTGGCCATAGAcc > 2:3786098/1‑101 (MQ=255)
gTCCCGGTCTGGATCGATCTGGACGCCTGAGGC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGAccc < 1:523242/101‑1 (MQ=255)
gTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGAccc < 1:3371922/101‑1 (MQ=255)
gTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGAccc < 2:2702382/101‑1 (MQ=255)
gTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCCCTTGGCTGCCCCGGCTCCTATTTCCCCGGCGCCGGCCCCTCGGGGCCCTAAAccc > 1:3166152/1‑101 (MQ=255)
cccGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAg < 2:5355050/101‑1 (MQ=255)
cccGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAg < 1:1748175/101‑1 (MQ=255)
ccGGTTTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGt < 1:841758/101‑1 (MQ=255)
ccGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGt < 2:4735675/101‑1 (MQ=255)
cGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTc < 1:4725031/101‑1 (MQ=255)
gTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGa < 1:3770177/101‑1 (MQ=255)
tCTGGATCGATTTGGACGCCTGAGAC.GG..CCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGaaa < 2:1948856/101‑1 (MQ=255)
tGGATCGATCTGGACGCCTGAGCC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAAAc < 2:2401360/101‑1 (MQ=255)
tGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAAAc < 1:866975/101‑1 (MQ=255)
tGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAAAc > 2:2562678/1‑101 (MQ=255)
ggATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAAACg < 2:5095078/101‑1 (MQ=255)
gatcgatcTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGGGGCTCCTCTTTCCCCGCGCCCGTCGCGGCGGGGCCATAGACCCAGTCGAAACgc > 1:783728/1‑100 (MQ=255)
gatcgatcTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAAACgg < 1:520966/101‑1 (MQ=255)
atcgagcGGGCCGCCGGAGCC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAAACGGc < 2:1460010/101‑1 (MQ=255)
tcgatcTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAAACGGcc > 2:5511337/1‑101 (MQ=255)
cgatcTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCCATTTCCCCCGCGCCGTCACGTCGTGGCCCTAGACCCAGTCGAAACGGccc > 1:1135959/1‑101 (MQ=255)
cgatcTGGACGCCGGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAAACGGccc < 2:4987937/101‑1 (MQ=255)
gatcTGGGCGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAAACGGCCCa < 1:2130412/101‑1 (MQ=255)
gatcTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAAACGGCCCa < 1:5474661/101‑1 (MQ=255)
gatcTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAAACGGCCCa < 1:3458736/101‑1 (MQ=255)
gatcTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAAACGGCCCa > 1:3575083/1‑101 (MQ=255)
gatcTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCCCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCCTAGACCCAGTCGAAACGGCCCa > 1:4225276/1‑101 (MQ=255)
catcTGGACGCCTGAGGC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGTGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAAACGGCCCa < 2:4833425/100‑1 (MQ=255)
atcTGGACGCCTGAGAC.GGCCCCCCCCCCCCCTTGGCTCCCGCGGCTCCTATTTCCCCGGCCCCGTCCCGCCGGGGCCATAACCCCAGCCCAAACACCCCa > 1:2558019/1‑101 (MQ=255)
atcTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAAACGGCCTAg < 1:3308560/101‑1 (MQ=255)
tGGACGCCTGGGTC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAAACGGCCCAGGAt < 2:2134113/101‑1 (MQ=255)
tGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGCCGTGGCCATAGACCCAGTCGAAACGGCCCAGGAt > 1:103445/1‑101 (MQ=255)
gccGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAAACGGCCCAGGATCt < 2:2348252/99‑1 (MQ=255)
gccccTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAAACGGCCCAGGATCtt < 2:1491052/98‑1 (MQ=255)
aCGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAAACGGCCCAGGATCtt > 1:441436/1‑101 (MQ=255)
cGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAACCGGCCCAGGATCTTg > 2:4351639/1‑101 (MQ=255)
ctgggcc.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAAACGGCCCAGGATCTTGccc < 2:4184953/95‑1 (MQ=255)
gagaC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAAACGGCCCAGGATCTTGCCCgg < 1:590685/101‑1 (MQ=255)
aC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAAACGGCCCAGGATCTTGCCCGgcgc < 1:3699000/101‑1 (MQ=255)
gg.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAAACGGCCCAGGATCTTGCCCGGCGCaa > 2:2201598/1‑101 (MQ=255)
gg.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAAACGGCCCAGGATCTTGCCCGGCGCaa < 1:1678368/101‑1 (MQ=255)
ccccccccccGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAAACGGCCCAGGATCTTGCCCGGCGCAATc < 1:5379170/101‑1 (MQ=255)
|
CCGATCTGTTGCGCGATGCGGGCATCGACAAGGAGGTCCGCGCGGGCGAGAAACCCTCGGACCATGTCCCGGTCTGGATCGATCTGGACGCCTGAGAC.GG.CCCCCCCCCCGCTTGGCTGCCGCGGCTCCTATTTCCGCGGCGCCGTCACGTCGTGGCCATAGACCCAGTCGAAACGGCCCAGGATCTTGCCCGGCGCAATC > NC_014034/2606345‑2606545
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|