Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 2,757,445 Δ1 bp 2.0% intergenic (+322/‑247) RCAP_rcc02566 → / → RCAP_rcc02567 reverse transcriptase catalytic domain‑containing protein/resolvase

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140342,757,4450C→. 2.0% 4.6 ‑1.2 ‑0.2197intergenic (+322/‑247)RCAP_rcc02566/RCAP_rcc02567reverse transcriptase catalytic domain‑containing protein/resolvase
Reads supporting (aligned to +/- strand):  new base (1/3):  ref base (114/78):  total (115/82)
Fisher's exact test strand distribution p-value = 3.08e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.50e-01

Only 100 of 253 total aligned reads displayed.

GCCGCCCGCACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACCTCTCCC  >  NC_014034/2757346‑2757545
                                                                                                    |                                                                                                    
  cccccgcACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.cccc                                                                                                   <  2:3227153/99‑1 (MQ=255)
   gcccgcACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.ccccc                                                                                                  >  1:4685150/1‑101 (MQ=255)
    cccgcACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.cccccc                                                                                                 <  1:4349438/101‑1 (MQ=255)
    cccgcACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGGGCAGCCGCGCAG.cccccc                                                                                                 >  1:5459959/1‑101 (MQ=255)
     cctgccGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.ccccccc                                                                                                <  1:620480/96‑1 (MQ=255)
      cgccgggCAAGCCCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.cccccccc                                                                                               <  2:5458869/96‑1 (MQ=255)
      cgcACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.cccccccc                                                                                               <  1:32418/101‑1 (MQ=255)
      cgcACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.cccccccc                                                                                               >  1:5257847/1‑101 (MQ=255)
       gcACGACAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.ccccccccc                                                                                              <  1:2512319/101‑1 (MQ=255)
          gggCAAGCGGCAGCCGCAAAAGCGATCGGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCCCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGt                                                                                           <  1:4298015/100‑1 (MQ=255)
           ggCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTg                                                                                          >  1:264330/1‑101 (MQ=255)
           ggCAAGCCCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCTACCACCTCGACCGAAGTGCAGCCGCGCAG.ACCCCCCCCGGTg                                                                                          <  1:585869/101‑1 (MQ=255)
            gCAGGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTgg                                                                                         <  2:5354869/101‑1 (MQ=255)
            gCAAGCGCCAGCCGCAAAAGAGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTgc                                                                                         >  2:818544/1‑100 (MQ=255)
              aaGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGgcc                                                                                       <  2:2973629/101‑1 (MQ=255)
              aaGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGgcc                                                                                       >  2:2819644/1‑101 (MQ=255)
               aGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATACGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGATGgccg                                                                                      >  1:5757122/1‑101 (MQ=255)
                gcgcCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGCTGgccgc                                                                                     >  1:1477706/1‑101 (MQ=255)
                gcgcCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG..CCCCCCCCGGTGgccgcc                                                                                    <  2:1289387/101‑1 (MQ=255)
                 ccccAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGgccgcc                                                                                    <  2:3583702/99‑1 (MQ=255)
                   ccAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGccgcccc                                                                                  >  2:4608632/1‑100 (MQ=255)
                     aGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCcgcccgcc                                                                                >  1:4847527/1‑101 (MQ=255)
                      gCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCcccccccc                                                                               >  1:1053907/1‑101 (MQ=255)
                       ccGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCt                                                                              <  2:5178424/101‑1 (MQ=255)
                        cGCAAAAGCGATCAGGCCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTg                                                                             <  2:4374691/101‑1 (MQ=255)
                         gCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTgg                                                                            <  1:2334201/101‑1 (MQ=255)
                         gCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTgg                                                                            <  1:707356/101‑1 (MQ=255)
                         gCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAACCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTgg                                                                            <  1:1160342/101‑1 (MQ=255)
                          cAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTggg                                                                           >  2:151569/1‑101 (MQ=255)
                            aaaGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGcc                                                                         <  1:3881483/101‑1 (MQ=255)
                            aaaGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGcc                                                                         >  1:5635268/1‑101 (MQ=255)
                              aGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCg                                                                       >  1:1850042/1‑101 (MQ=255)
                                 gATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTc                                                                    >  1:2570753/1‑101 (MQ=255)
                                 gATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGAGCAGCCGCGCAG.CACCCCCCCGGCGGCCGCCCGCCCCGGGCCCGTTc                                                                    >  2:2274828/1‑101 (MQ=255)
                                   tCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCTCCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAg                                                                  <  2:5756119/101‑1 (MQ=255)
                                    cAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAgg                                                                 <  2:2570611/101‑1 (MQ=255)
                                     aGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGAAGCCGAGCAG.CCCCCCCCNGGGGGCCCCCCCCCCTGGGCCCGTTCAGGt                                                                >  1:1680118/1‑101 (MQ=255)
                                      gggCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTc                                                               <  2:4135334/101‑1 (MQ=255)
                                      gggCCGCATATTTTGGCGGAAAAACCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTc                                                               <  1:1954815/101‑1 (MQ=255)
                                        gCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGc                                                             >  1:1576278/1‑101 (MQ=255)
                                        gCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGc                                                             >  1:2810201/1‑101 (MQ=255)
                                         ccGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGcc                                                            <  1:826798/101‑1 (MQ=255)
                                          cGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGccc                                                           <  2:2422517/101‑1 (MQ=255)
                                            cATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAg                                                         <  1:3071357/101‑1 (MQ=255)
                                            cATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGGTCAGGTCGCCCAg                                                         >  2:1625112/1‑101 (MQ=255)
                                             atatTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGc                                                        >  1:4060254/1‑101 (MQ=255)
                                              tatTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGcc                                                       >  1:391662/1‑100 (MQ=255)
                                              tatTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCa                                                       >  2:3612223/1‑101 (MQ=255)
                                              tatTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCCGTGGCCGCCCGCCCTGGGCCCGGTCAGGTCGCCCCGCa                                                       >  2:3447109/1‑101 (MQ=255)
                                               atTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCAc                                                      >  2:4191054/1‑101 (MQ=255)
                                               atTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCAc                                                      >  2:3904144/1‑101 (MQ=255)
                                                ttttGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACg                                                     >  2:272669/1‑101 (MQ=255)
                                                ttttGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACg                                                     >  2:3821495/1‑101 (MQ=255)
                                                ttttGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACg                                                     >  2:5074765/1‑101 (MQ=255)
                                                ttttGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGGGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACg                                                     >  1:5400923/1‑101 (MQ=255)
                                                 tttGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGc                                                    >  1:1030369/1‑101 (MQ=255)
                                                  ttGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCt                                                   >  2:2502184/1‑101 (MQ=255)
                                                    ggCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTTGGCCCGTTCAGGTCGCCCAGCACGCTcc                                                 >  2:3086627/1‑101 (MQ=255)
                                                     gCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTccc                                                <  2:1941227/101‑1 (MQ=255)
                                                         aaaaaTCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAgg                                            >  2:4687789/1‑101 (MQ=255)
                                                          aaaccccGACCCCCCCCCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGgc                                           <  2:123536/96‑1 (MQ=255)
                                                           acaTCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTCGCCGTCCGCCCTGTGCCCGTTCAGGTCGCCCAGCATGCTCCCGAGgcc                                          >  2:4799407/3‑101 (MQ=255)
                                                           aaaTCCGAGCCACCGCCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGgcc                                          <  2:1842275/101‑1 (MQ=255)
                                                           aaaTCCGAGCCACCCCCTCGCCCGAAGGGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGgcc                                          <  2:2328125/101‑1 (MQ=255)
                                                           aaaCCCGAGCCACCCCCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGgcc                                          <  1:5028770/101‑1 (MQ=255)
                                                                cGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGcccc                                     >  2:2801440/1‑101 (MQ=255)
                                                                cGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCCcccc                                     >  1:2736998/1‑101 (MQ=255)
                                                                  aGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAg                                   <  1:3597428/101‑1 (MQ=255)
                                                                     caccacCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAgccc                                >  2:4928044/1‑99 (MQ=255)
                                                                      acccccTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGcgcc                               <  1:2476930/101‑1 (MQ=255)
                                                                      accaccTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGGGGCCGCCCGCCCCGGGCCCGTTCAGGGCGCCCCGCACGCTCCCGAGGCCGCCCCAGcgcc                               >  1:4542321/1‑101 (MQ=255)
                                                                       ccaccTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCCGGGGGCCCCCCCCCCTGGGCCCGTTCAGGCCGCCCCGCACGCCCCCGGGGCGCCCCCCGcgcc                               >  2:1099920/1‑101 (MQ=255)
                                                                       ccaccTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGGGGCCGCCCCCCCTGGGCCCGGTCAGGGCGCCCAGCAAGCTCCCGAGGTCGCCCCAAcgccg                              >  1:5649261/1‑101 (MQ=255)
                                                                         accTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCCGCACGCTCCCGAGGCCGCCCCAGCgccgcc                            >  2:4997109/1‑101 (MQ=255)
                                                                         accTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCgccgcc                            <  1:1908758/101‑1 (MQ=255)
                                                                           cTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGcccc                          <  1:295599/101‑1 (MQ=255)
                                                                            tCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCt                         <  1:122508/101‑1 (MQ=255)
                                                                            ccGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCt                         <  1:2702197/100‑1 (MQ=255)
                                                                             cGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTc                        <  2:2655737/101‑1 (MQ=255)
                                                                             cGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGGGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCCCCCCTc                        >  1:5560618/1‑101 (MQ=255)
                                                                              gACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTcc                       >  1:178685/1‑101 (MQ=255)
                                                                               cccGAAGGGCACCCGCCCCC.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTccc                      <  2:1765247/100‑1 (MQ=255)
                                                                                  gAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCCGCGCCGCGCCTCCCGcc                   >  2:1038818/1‑101 (MQ=255)
                                                                                  gAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGcc                   >  2:214190/1‑101 (MQ=255)
                                                                                   aaGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGccc                  >  2:3970047/1‑100 (MQ=255)
                                                                                    aGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCAc                 >  1:3696767/1‑101 (MQ=255)
                                                                                     gtccAGCCGCGCAC.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCAcc                <  2:4887645/98‑1 (MQ=255)
                                                                                      ggCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCAccc               <  2:4060007/100‑1 (MQ=255)
                                                                                       gCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCAcccc              <  2:4542049/101‑1 (MQ=255)
                                                                                        cAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCg             <  1:1312174/101‑1 (MQ=255)
                                                                                         aGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCAcccccg            >  2:2384563/1‑99 (MQ=255)
                                                                                         aGCCCCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCgg            <  2:1849932/101‑1 (MQ=255)
                                                                                          gCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGc           >  2:3296961/1‑101 (MQ=255)
                                                                                           ccGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCa          <  1:3435688/101‑1 (MQ=255)
                                                                                            cgcgCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCCGCAc         >  2:1501804/1‑101 (MQ=255)
                                                                                               ccAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACctc      <  2:5648966/100‑1 (MQ=255)
                                                                                                cAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACctct     <  1:2819805/101‑1 (MQ=255)
                                                                                                cAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACctct     <  2:5560326/101‑1 (MQ=255)
                                                                                                cAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACctct     <  1:895107/101‑1 (MQ=255)
                                                                                                    cccccccccGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCCCCTCTccc  >  1:3397279/1‑101 (MQ=255)
                                                                                                    |                                                                                                    
GCCGCCCGCACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACCTCTCCC  >  NC_014034/2757346‑2757545

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 22 ≤  ATCG  < 31 ≤  ATCG  < 39 ≤  ATCG