BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	2,876,603	Δ1 bp	2.6%	intergenic (+102/‑91)	RCAP_rcc02685 → / → prfA	glutathione S‑transferase/peptide chain release factor 1

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	2,876,603	0	C→.	2.6%	2.2 ‑3.2 ‑0.3	117	intergenic (+102/‑91)	RCAP_rcc02685/prfA	glutathione S‑transferase/peptide chain release factor 1
Reads supporting (aligned to +/- strand): new base (3/0): ref base (37/76): total (41/76)
Fisher's exact test strand distribution p-value = 3.90e-02
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.81e-01

Only 100 of 148 total aligned reads displayed.


GCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.CCCCGCCCACCCCCGCCCACCCTTGACCCAGAGCCCGGTCTCGGTCAGATGAACCCATGGTTCCGC  >  NC_014034/2876505‑2876703


gccgcGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCcccgccc                                                                                                           <  2:2054083/101‑1 (MQ=255)


 ccgcGCGCCCCTGCTTTTTCTTGGGGAAAATCCGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCcccgcccg                                                                                                          <  1:3992620/101‑1 (MQ=255)


 ccgcGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCcccccccg                                                                                                          >  1:1901204/1‑101 (MQ=255)


    cgcgcCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGt                                                                                                       <  2:5417605/101‑1 (MQ=255)


    cgcgcCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CACGATGGACGACGGGGCAGCGCCCCCGCCCGGGt                                                                                                       <  2:2592677/101‑1 (MQ=255)


     gcgcCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTc                                                                                                      <  2:1049278/101‑1 (MQ=255)


       gcCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCATCGCCCCCGCCCGGGTCG.c                                                                                                   <  2:3718290/101‑1 (MQ=255)


       gcCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.c                                                                                                   >  2:1187739/1‑101 (MQ=255)


        ccccTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.cc                                                                                                  >  2:1399769/1‑101 (MQ=255)


         cccTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCCCCCCGGGCG.ccc                                                                                                 >  1:4154959/1‑101 (MQ=255)


         cccTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATCGACGACGGGGCAGCGCCCCCCCCCCGGGCG.ccc                                                                                                 >  1:5020184/1‑101 (MQ=37)


          ccTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.cccc                                                                                                <  1:38431/101‑1 (MQ=255)


          ccTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.cccc                                                                                                <  2:620310/101‑1 (MQ=255)


          ccTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCAATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.cccc                                                                                                <  1:1857250/101‑1 (MQ=255)


           cTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCg                                                                                               <  1:925076/101‑1 (MQ=255)


           cTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCg                                                                                               <  2:4998193/101‑1 (MQ=255)


            tGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCNCGCCCGCGTCG.CCCCgg                                                                                              >  2:2819740/1‑101 (MQ=255)


             gCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCggg                                                                                             >  1:4776436/1‑101 (MQ=255)


             gCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCCCCCCGGGCG.CCCCcgg                                                                                             >  2:1298797/1‑101 (MQ=37)


              cTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGgc                                                                                            <  2:4229924/101‑1 (MQ=255)


              cTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGgc                                                                                            >  1:391177/1‑101 (MQ=255)


               tttttCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGgcg                                                                                           <  2:2095574/101‑1 (MQ=255)


               tttttCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCCCCCCGGGCG.CCCCcgggc                                                                                           >  2:5075458/1‑99 (MQ=37)


                ttttCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCCCCCCGGGCG.CCCCCGgccc                                                                                          >  2:4578010/1‑99 (MQ=25)


                ttttCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCCATGGACGACGGGGCAGCGCCCCCCCCCGGGGCG.CCCCGGgcg.c                                                                                         >  1:571366/1‑101 (MQ=255)


                  ttCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.Ag                                                                                      <  2:1791372/101‑1 (MQ=255)


                  ttCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.Ag                                                                                      <  1:2708814/101‑1 (MQ=255)


                   tCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.c                                                                                    <  1:2819901/101‑1 (MQ=255)


                    cTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGGCG.CCCCGGGCG.C.Aggc                                                                                    >  2:2803007/1‑99 (MQ=255)


                     ttGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCCCCCCGGGCG.CCCCCGGGG.C.CG.ccc                                                                                  >  2:4572236/1‑101 (MQ=25)


                      tGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.ccc.c                                                                                <  2:5541216/101‑1 (MQ=255)


                      tGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCCCCCGGGGCG.CCCCGGGGG.C.CG.ccc.c                                                                                >  1:3428130/1‑101 (MQ=25)


                       ggggAAAATACGCCGGGGGTCGTCCATTGCGTCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGGCCCCGCCCCGGGTG.CGCCGGggg.ctcacccc                                                                                  >  1:5178535/1‑94 (MQ=25)


                       ggggAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCCCCCCGGGCG.GCCCCGGCG.C.CG.GCC.C.g                                                                              >  2:3988329/1‑101 (MQ=25)


                        gggAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.gg                                                                             <  1:1399857/101‑1 (MQ=255)


                          gAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.gggg                                                                           <  1:5584295/101‑1 (MQ=255)


                          gAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGGCG.CCCCCGGCG.C.CG.CCC.C.cggg                                                                           >  2:5306677/1‑101 (MQ=37)


                           aaaaTACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTGG.CCCCGGGCG.C.AG.CCC.C.GGGGc                                                                          <  1:1761732/101‑1 (MQ=255)


                           aaaaTACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGc                                                                          <  2:2981126/101‑1 (MQ=255)


                           aaaaTACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGc                                                                          <  1:2598335/101‑1 (MQ=255)


                            aaaTACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCCCCCGGGGCG.CCCCCGGCG.C.CG.CCC.C.CGGGCg                                                                         >  1:1534901/1‑101 (MQ=25)


                              aTACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGaa                                                                       <  1:1187820/101‑1 (MQ=255)


                              aTACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCCCCCGGGGCG.CCCCCGGGG.C.CG.CCC.C.cgggggga                                                                       >  1:384232/1‑97 (MQ=21)


                               tACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGaaa                                                                      <  1:2333194/101‑1 (MQ=255)


                               tACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGaaa                                                                      <  2:4300307/101‑1 (MQ=255)


                               tACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGaaa                                                                      <  1:3465012/101‑1 (MQ=255)


                                 cGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.c                                                                   <  1:1142414/101‑1 (MQ=255)


                                 cGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.c                                                                   <  2:391133/101‑1 (MQ=255)


                                  gCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCCCCCGGGGCG.CCCCGGGGG.C.CC.CCC.C.GGGGGGAAAA.cc                                                                  >  1:3788185/1‑101 (MQ=21)


                                  gCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCCCCCCGGGCG.CCCCCGGCG.C.CGCCCC.C.GGGGGGaaacc                                                                    >  1:1155706/1‑99 (MQ=21)


                                  ccggggggTCGTCCATTGGGGCACCATCGGCTCAAGACCCGATGGACGAC.GGGCGGAGCCCCCGGCGGGGGGC.CCCCGGGGC.C.AG.CCCGC.GGGGcaatacc                                                                    >  1:5503536/4‑95 (MQ=21)


                                   ccGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.ccc                                                                 <  1:151937/101‑1 (MQ=255)


                                    ggggggTCGTCCATTGGGGCACCATCGGCTCAAGACCCGATGGACGAC.GGGCGGAGCCCCCG.GCGGGGCG.CCCCGGGGG.CAAG.CCC.C.CGGGGGAAAC.ccaa                                                                >  1:2437483/2‑99 (MQ=21)


                                     gggggTCGTCCATTGGGGCACCATCGGCTCAAGACCCGATGGACGAC.GGGCGGAGCCCCCG.GCGGGGGG.CCCCCGGCGCC.AG.GCC.C.AGGGGGAAAC.cccag                                                               >  1:564133/1‑99 (MQ=21)


                                     gggggTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.ccccg                                                               <  1:5560448/101‑1 (MQ=255)


                                     gggggTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGGCG.CCCCGGGCG.C.CG.CCC.C.GGGGGGGAAA.ccccc                                                               >  2:3248690/1‑100 (MQ=25)


                                         gtcgtcCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.ccccgccca                                                           <  2:2458069/101‑1 (MQ=255)


                                         gtcgtcCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.ccccgccca                                                           <  2:2665122/101‑1 (MQ=255)


                                         gtagtcCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.ccccgccca                                                           <  2:886014/98‑1 (MQ=255)


                                         ggcgccaatggcggcgCCGGCGCTTCGTG.CCGGAGTGCCGACGGGCCTTCGCCTCCGCCCGGGTCG.CCCGGGGCT.C.AG.CCC.C.GGGGCGAAAT.ccccgccca                                                           <  2:2058622/91‑1 (MQ=255)


                                         gatgtcCTTTGCGCCGCCATCGGTTCAAG.CTCGATTGACGCCGGGGCATCGCACCCTCCCGGGTAG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.ccccgccca                                                           <  1:929945/98‑1 (MQ=25)


                                           cgtcCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCCGGGCG.CCCCCGGCG.C.CGCCCC.C.GGGGGGAAAC.cccccccccc                                                          >  2:2940275/1‑99 (MQ=25)


                                            gtcCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.ccccgcccaccc                                                        <  1:3362813/101‑1 (MQ=255)


                                            gtcCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCCCCCCGGGCG.CCCCCGGGG.C.CG.CCC.C.CGGGGGGAAA.cccccccccccc                                                        >  1:2047570/1‑101 (MQ=21)


                                             tcCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.ccccgcccacccc                                                       <  1:4227583/101‑1 (MQ=255)


                                              ccATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.ccccgcccaccccc                                                      <  2:4003374/101‑1 (MQ=255)


                                              ccATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGGCG.CCCCGGGCG.C.CG.CCC.C.GGGGGGAAAT.ccccgcccaccccc                                                      >  2:5236255/1‑101 (MQ=255)


                                               cATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGGCG.CCCCCGGCG.C.CG.CCC.C.GGGGGGGAAA.caccgcccccccccc                                                     >  2:1712063/1‑100 (MQ=37)


                                                 ttGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.ccccgcccacccccgcc                                                   <  2:5766332/101‑1 (MQ=255)


                                                 ttGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.ccccgcccacccccgcc                                                   <  1:4334/101‑1 (MQ=255)


                                                  tGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.ccccgcccacccccgccc                                                  <  1:589849/101‑1 (MQ=255)


                                                   gcggcgCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCTAAAT.ccccgcccacccccgccca                                                 <  2:1866237/101‑1 (MQ=255)


                                                    cggcgCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.ccccgcccacccccgcccac                                                <  1:5338161/101‑1 (MQ=255)


                                                      gcgcCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.CCccgcccacccccgcccaccc                                              <  2:1726371/101‑1 (MQ=255)


                                                       tcttccgatctCAAT.CCCGATGGACGACGGGGCGGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.CCCCGCCCACCCCCGCCCACCCt                                             <  1:4994942/91‑1 (MQ=37)


                                                       cgcCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.CCCCGCCCACCCCCGCCCACCCt                                             <  2:2285/101‑1 (MQ=255)


                                                       cgcCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCCCCCCGGGCG.CCCCGGGGG.C.AGCCCC.C.GGGGGGAAAC.CCcccccccccccccccccccc                                              >  1:5423132/1‑101 (MQ=255)


                                                            tCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGGCC.CCCCCGGCG.C.AG.ACA.C.CGGGCGCGCTGCGCCGCCCCCCCCTGCCCCCCCtgacc                                         >  2:5156869/1‑97 (MQ=255)


                                                              ggTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.CCCCGCCCACCCCCGCCCACCCTTGACCCa                                      <  1:2561406/101‑1 (MQ=255)


                                                               gTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.CCCCGCCCACCCCCGCCCACCCTTGACCCag                                     <  1:4812715/101‑1 (MQ=255)


                                                                ttCAAG.CCCGATGGACGACGGGGCAGCGCCCCCCCCCGGGGCG.CCCCCGGCG.C.AGCCCC.C.GGGGGGAAAC.CCCCCCCCCCCCCCCCCCCCCCTTACCCCaa                                     >  1:5451038/1‑100 (MQ=255)


                                                                ttCAAG.CCCGATGGACGACGGGGCAGCGCCCCCCCCCGGGGCG.CCCCCGGCG.C.AG.CCC.C.CGGGCGGAAA.CCccccccccccccccccccccctccccccaa                                    >  1:2138720/1‑91 (MQ=255)


                                                                   aaG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.CCCCGCCCACCCCCGCCCACCCTTGACCCAGAGcc                                 <  1:4578286/101‑1 (MQ=255)


                                                                   aaG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.CCCCGCCCACCCCCGCCCACCCTTGACCCAGAGcc                                 <  1:1298880/101‑1 (MQ=255)


                                                                   aaG.CCCGATGGACGACGGGGCAGCGCCCCCCCCCCGGGCG.CCCCCGGGG.C.AGCCCC.C.GGGGGGAAAA.CCCCCCCCCCCCCCCCCCCCCCttacccccaggc                                  >  2:3945780/1‑91 (MQ=255)


                                                                       cccGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.CCCCGCCCACCCCCGCCCACCCTTGACCCAGAGCCCgg                              <  2:5356934/101‑1 (MQ=255)


                                                                           aTGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.CCCCGCCCACCCCCGCCCACCCTTGACCCAGAGCCCGGtctc                          <  1:4387181/101‑1 (MQ=255)


                                                                            tGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.CCCCGCCCACCCCCGCCCACCCTTGACCCAGAGCCCGGTCTCg                         <  1:3988573/101‑1 (MQ=255)


                                                                            tGGACGACGGGGCAGCGCCCCCCCCCCGGGCG.CCCCCGGCG.C.CG.CCC.C.GGGGCGGAAT.CCCCCCCCCCCCCCCCCCCCCCCTGACCCCCAGCCCGGTCTCg                         >  2:5584823/1‑101 (MQ=255)


                                                                             ggACGACGGGGCAGCGCCCCCGCCCGGGGCGCCCCCGGGGG.C.GC.CCC.C.GGGGGGAAAA.CCCCCCCCCCCCCCCCCCCCCCTT.ACCCCCAGCCCCGgctccg                        >  1:4540077/1‑99 (MQ=255)


                                                                             ggACGACGGGGCAGCGCCCCCGCCCCGGTCG.CCCCCGGCG.C.CG.CCC.C.CGGGCGAAAA.CTCCTCCCCCCCCCCCCCCCCCTTGTACCAAAGACCGGactctc                        >  1:321200/1‑99 (MQ=255)


                                                                              gacgacGGGGCAGCGCCCCCGCCCGGGGCG.CCCCCGGGG.C.CG.CCC.CGGGGGGGAAAT.CCCCCCCCCCCCCCCCCCCCCCTTAGCCCGAAGCCCgggtccgg                        >  2:5704393/1‑95 (MQ=255)


                                                                                 gacgGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.CCCCGCCCACCCCCGCCCCCCCTTGACCCAGAGCCCGGTCTCGGTCAg                    <  2:4776155/101‑1 (MQ=255)


                                                                                      ggCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.CCCCGCCCACCCCCGCCCACCCTTGACCCAGAGCCCGGTCTCGGTCAGATGaa               <  1:3676330/101‑1 (MQ=255)


                                                                                             cccccGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.CCCCGCCCACCCCCGCCCACCCTTGACCCAGAGCCCGGTCTCGGTCAGATGAACCCATgg        <  1:5236542/101‑1 (MQ=255)


                                                                                               cccgcccgGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.GCCCGCCCACCCCCGCCCACGCCTGACCCACAGCCCGGGCCCGGTCAGATGAACCCATgggt      >  2:5725527/1‑99 (MQ=38)


                                                                                                 cgcccgGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.CCCCGCCCACCCCCGCCCACCCTTGACCCAGAGCCCGGTCTCGGTCAGATGAACCCATGGTTcc    <  2:3427925/101‑1 (MQ=255)


                                                                                                   cccgGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGCAAG.CCCCGCCCACCCCCCGCCACCCTTTACCCAGAACCCGGTCCCGGTCAGACGACCCCACGGGTCCGc  >  2:2718381/1‑101 (MQ=255)


                                                                                                   cccgGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.CCCCGCCCACCCCCGCCCACCCTTGACCCAGAGCCCGGTCTCGGTCAGATGAACCCATGGTTCCGc  <  2:910591/101‑1 (MQ=255)


                                                                                                   cccgGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.CCCCCCCCACCCCCGCCCACCCTTGACCCACAGCCCGGTCTCGGTCAGATGAACCCATGGTTCCGc  >  1:1622524/1‑101 (MQ=255)


GCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCAGCGCCCCCGCCCGGGTCG.CCCCGGGCG.C.AG.CCC.C.GGGGCGAAAT.CCCCGCCCACCCCCGCCCACCCTTGACCCAGAGCCCGGTCTCGGTCAGATGAACCCATGGTTCCGC  >  NC_014034/2876505‑2876703

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 24 ≤


ATCG

< 33 ≤


ATCG

< 39 ≤


ATCG