| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 432,463 | Δ1 bp | 3.5% | intergenic (+66/+82) | RCAP_rcc00403 → / ← RCAP_rcc00404 | hypothetical protein/Sua5/YciO/YrdC/YwlC family protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 432,463 | 0 | A→. | 3.5% | 15.0 ‑2.7 ‑0.1 | 231 | intergenic (+66/+82) | RCAP_rcc00403/RCAP_rcc00404 | hypothetical protein/Sua5/YciO/YrdC/YwlC family protein |
| Reads supporting (aligned to +/- strand): new base (6/2): ref base (90/133): total (96/135) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.94e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.40e-01 | ||||||||||
Only 100 of 269 total aligned reads displayed.
GCGCACGCTTTCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GT.CTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCCGCGGCGCGGCG > NC_014034/432364‑432563
|
gcgcACGCTTTCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCTCTTCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGaaa < 1:3850033/101‑1 (MQ=21)
cgcACGCTTTCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAg < 2:5453115/101‑1 (MQ=255)
gcACGCTTTCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGAGATTTGAGGCAAGATGAAAGc > 1:2364160/1‑101 (MQ=255)
cACGCTTTCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGcc > 1:4556941/1‑101 (MQ=255)
ccggtttCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCg < 1:2218575/97‑1 (MQ=255)
aCGCTTTCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCg < 1:3055240/101‑1 (MQ=255)
cGCTTTCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.a < 2:497395/101‑1 (MQ=255)
gCTTTCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.At < 2:1792117/101‑1 (MQ=255)
tttCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATcc < 2:2640957/101‑1 (MQ=255)
ttCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCg < 2:238664/101‑1 (MQ=255)
gatcgcggcggcggGGCTTGCCCGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCg < 2:1268354/97‑1 (MQ=17)
tCGGCGGCGGAGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCgg < 1:5488654/101‑1 (MQ=255)
gcggcggcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCt > 1:245205/1‑101 (MQ=255)
cggcggcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCtt < 1:995372/101‑1 (MQ=255)
cggcggcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCtt > 2:5046061/1‑101 (MQ=255)
gcggcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCg < 2:4119138/101‑1 (MQ=255)
gcggcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCg > 1:1690151/1‑101 (MQ=255)
gggcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGt < 2:4389382/100‑1 (MQ=255)
cggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTc < 2:2890496/101‑1 (MQ=255)
gggCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCa > 1:2702692/1‑101 (MQ=255)
gggCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCa < 1:3521478/101‑1 (MQ=255)
ggCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCAt < 2:2210739/101‑1 (MQ=255)
ggCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCAt < 2:59371/101‑1 (MQ=255)
gCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGACG.ATCCGGGCTTCGTTTCATc > 2:1342194/1‑101 (MQ=255)
ccACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCt < 1:1428640/101‑1 (MQ=255)
cTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGcccc > 1:3313420/1‑101 (MQ=255)
cTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGcccc > 2:4084339/1‑101 (MQ=255)
atGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGcccc > 2:3294165/2‑101 (MQ=255)
tGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCa > 1:2663333/1‑101 (MQ=255)
gAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCaa > 1:1304300/1‑101 (MQ=255)
aGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCaaa < 1:3178902/101‑1 (MQ=255)
aGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCaaa < 2:1015197/101‑1 (MQ=255)
ccGGGCAGGGGGGCGCTTCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAatat < 2:5202594/101‑1 (MQ=255)
ccGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAatat < 2:4427269/101‑1 (MQ=255)
cGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.c < 2:4545255/101‑1 (MQ=255)
cGGGCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.c < 2:14140/101‑1 (MQ=255)
gggCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.cc < 2:735686/101‑1 (MQ=255)
gggCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATAGTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTTATCTTGGCCCGAATAT.cc > 2:1591596/1‑101 (MQ=18)
ggacggggggCTCTGCCCCCC.GG.CTTCG..CTCCCCCCGGGATATTTGCGGCAAGATGAA....G.....GGGCATGATTTCATCTTGCCCGAAATAT.CCCAGGGGTGAAtt > 2:2125221/5‑101 (MQ=2)
ggCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCCAATAT.ccc > 1:4360376/1‑101 (MQ=255)
ggCAGGGGGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.ccc < 1:3721795/101‑1 (MQ=255)
ncNNGNNGGCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.cccn < 1:2310865/100‑2 (MQ=25)
acggggggCTCTGCCCCCC.GG.CTTCG..CTCCCCCCGGGATATTTGCGGCAAGATGAA....G.....GGGCATGATTTCATCTTGCCCGAAATAT.CCCAGGGGTGAAttgg > 1:5550287/3‑99 (MQ=2)
cggggggCTCTGCCCCCC.GG.CTTCG..CTCCCCCCGGGATATTTGCGGCAAGATGAA....G.....GGGCATGATTTCATCTTGCCCGAAATAT.CCCAGGGGTGAAttggc > 2:4762476/2‑98 (MQ=2)
ggggggGCCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCgggg < 1:767491/101‑1 (MQ=25)
ggggggCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCgggg > 1:2562656/1‑101 (MQ=255)
gggCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTg < 2:3612923/101‑1 (MQ=255)
gggCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAAGCG.ATCCGGGCTTCGTTTCATCTTGCCCCCAATAT.CCCcgggggg > 1:1046620/1‑99 (MQ=21)
ggCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCCAGATGAAAGCCG.ATCCGGGCTNCGNTNCNTCTTGCCCCCANTAT.CCCGGGGGGGa > 1:4984814/1‑101 (MQ=21)
ggCGCTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGa < 1:920166/101‑1 (MQ=255)
gcgcTGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGaa < 2:4287979/101‑1 (MQ=255)
cgcTGCCCCCCGGC.CTGCGGACTCCCCCCGGGGTATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATTTTTCCCCAAATAA.CCCGGGGGGGAAt > 1:3141422/1‑101 (MQ=21)
tGCCCCCC.GTCCTGCGGACTCCCCCCGGGGTATTTTAGGGAAAATGAAAACCG.GACCCGGGTTCGGTTTCTCTTTCCCCCCATATCCCCGGGGGGGAAttt > 1:45685/1‑101 (MQ=2)
tGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAAtttt > 1:4142499/1‑101 (MQ=255)
tGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAAtttt < 2:5474506/101‑1 (MQ=255)
tGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAAtttt < 1:5046345/101‑1 (MQ=255)
tGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAAtttt > 2:2471759/1‑101 (MQ=255)
tGCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGGGAAtttt > 1:4643210/1‑101 (MQ=255)
gCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTg < 2:311251/101‑1 (MQ=255)
gCCCCCC.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTg < 1:4698144/101‑1 (MQ=255)
ccccc.GTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATGT.CCCGGGGGTGAATTTTGgc > 2:2724467/1‑101 (MQ=255)
cccc.GTCCTGCGGACTCCCCCCGGGGTATTTTAGGGAAGATGAAAGACG.ATCCCGGCTTCGTTTTATCTTTCCCCCAACAT.CCCCGGGGGGAATTTTgggc > 2:1136278/1‑99 (MQ=16)
ccc.GTCCTGCGGACTCCCCCCGGGGAATTTTAGGGAAAAAGAAAACCGAACCCGGGCTTCGTTTCTTTTTCCCCCAAAATC.CCCGGGGGGGATttttttgc > 1:16629/1‑97 (MQ=255)
cgtccTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAg > 1:3652063/5‑101 (MQ=255)
cgtccTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAg > 1:3345161/5‑101 (MQ=255)
gtccTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGc < 2:692784/98‑1 (MQ=255)
ccTGCGGACTCCCCCCGGGATATTTGAGGCAAGAGGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCa < 2:3523564/100‑1 (MQ=255)
tGCGGCCTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCaaa < 2:3983509/101‑1 (MQ=255)
tGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCaaa < 2:1616309/101‑1 (MQ=255)
cGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAag < 1:5398775/101‑1 (MQ=255)
cccGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGTCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGTGGCAg < 2:1540510/101‑1 (MQ=255)
cccGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAg < 1:3980253/101‑1 (MQ=255)
cccGGGATATTTGAGGCAAGACGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAg < 2:2851708/101‑1 (MQ=255)
ccGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAgc < 2:563656/101‑1 (MQ=255)
ccGGGATATTTGAGGCAAGATGAAACCCG.ATCCGGGCTGCGTTTCATCTTGCCCCAAATGT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAgc < 1:421580/101‑1 (MQ=255)
cGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAgcg > 2:4613932/1‑101 (MQ=255)
ggATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGcc > 1:5280629/1‑101 (MQ=255)
ggATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGcc > 2:5719205/1‑101 (MQ=255)
gATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGccc < 1:1827960/101‑1 (MQ=255)
atatTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGcccc > 1:2048893/1‑101 (MQ=255)
atatTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGcccc > 1:669364/1‑101 (MQ=255)
atatTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGcccc < 2:1761182/101‑1 (MQ=255)
tatTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGccccc < 2:5125877/101‑1 (MQ=255)
atTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCt > 1:2022021/1‑101 (MQ=255)
tttGAGGCAAGATGCAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTa < 1:1591690/101‑1 (MQ=255)
tttGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTa > 1:1487314/1‑101 (MQ=255)
ttGAGGCAGGGTGAAAGCCG.ATCCGTGACTGGTTTCATTTTGCCTCAAATAT.ACCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTAt < 2:3759246/101‑1 (MQ=18)
ttGAGGCAAGATGAAAGCCG.GTCCGGGCTTCGTTTCATCTTGCCCCAAATTT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTAt < 1:2412119/101‑1 (MQ=255)
tggAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTAt < 2:1968849/99‑1 (MQ=255)
ggCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATcccc < 1:4493856/101‑1 (MQ=255)
cAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCcgc > 1:446553/1‑101 (MQ=255)
aaGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCcgcg > 1:4293007/1‑101 (MQ=255)
aaGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCcgcg < 1:5561719/101‑1 (MQ=255)
aGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCcgcgg > 2:3385946/1‑101 (MQ=255)
aTGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAACGAGGGGGCACCGCCCCCTATCCCcccgccg > 2:1887502/1‑101 (MQ=25)
aaaGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCcgcggcgcgg > 2:4857436/1‑101 (MQ=255)
aaaGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCcgcggcgcgg > 2:3807944/1‑101 (MQ=255)
aaGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCcgcggccgcgc > 1:1027197/1‑96 (MQ=255)
aaGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCCgcggcgcggc > 1:5770408/1‑101 (MQ=255)
aaGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGGGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCCgcggcgcggc > 1:5579080/1‑101 (MQ=255)
|
GCGCACGCTTTCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GT.CTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCCGCGGCGCGGCG > NC_014034/432364‑432563
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|