| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,065,845 | +C | 98.5% | intergenic (‑17/+117) | RCAP_rcc00969 ← / ← RCAP_rcc00970 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,065,845 | 1 | .→C | 98.5% | 3.0 ‑0.5 ‑0.6 | 272 | intergenic (‑17/+117) | RCAP_rcc00969/RCAP_rcc00970 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (128/140): ref base (1/3): total (129/143) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.24e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.34e-01 | ||||||||||
Only 100 of 311 total aligned reads displayed.
GTGCACCTCGGTCACCCGCCACTGGGTCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGG.CTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGATCGACCCGGCCCAGCCGCGCGCAGATC > NC_014034/1065745‑1065942
|
gTGCACCTCGGTCACCCGCCACTGGGTCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.gg.ggg > 1:3254113/1‑101 (MQ=255)
gTGCACCTCGGTCACCCGCCACTGGGTCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.gg.ggg > 1:2769531/1‑101 (MQ=255)
tGCACCTCGGTCACCCGCCACTGGGTCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGG.c > 2:4664215/1‑101 (MQ=255)
cccgtgggTCCCCCGCCACTGGGTCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGG.cct < 2:2577261/95‑3 (MQ=255)
cccTGGGTCCGCCGCCACTGGGTCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGG.cctc < 1:5608677/100‑4 (MQ=255)
cccTCGGTCACCCGCCACTGGGTCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGG.cctc < 2:2749281/100‑4 (MQ=255)
ccTGGGCCACCCGCCACTGGGTCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGG.cctcg < 2:1936101/101‑5 (MQ=255)
tCGGTCACCCGCCACTGGGTCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGAt > 2:1043450/1‑101 (MQ=255)
tCGGTCAACCGCCACTGGGTCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGAt > 1:1883603/1‑101 (MQ=255)
ccggccccccGCCACTGGGGCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGAt < 1:1269497/94‑1 (MQ=255)
ccGGTCCCCCGCCACTGGGTCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGAt < 2:3824691/100‑1 (MQ=255)
ggccccccGCCACTGGGTCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GGTGGC.CTCGAtct < 2:3613265/96‑1 (MQ=255)
ggTCACCCGCCACTGGGTCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGAtct > 2:3058986/1‑101 (MQ=255)
ggTCACCCGCCACTGGGTCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGAtct > 2:5256762/1‑101 (MQ=255)
gccccccGCCACTGGGTCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGAtctc < 1:2616705/97‑1 (MQ=255)
ccACTGGGTCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAAATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCa < 2:4197069/101‑1 (MQ=255)
cACTGGGTCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCAt < 1:5373810/101‑1 (MQ=255)
aCTGGGTCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATc < 1:2037292/101‑1 (MQ=255)
cTGGGTCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCg > 2:1570279/1‑101 (MQ=255)
tGGGTCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCgc > 2:542564/1‑101 (MQ=255)
gggTCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCgca < 2:4074240/101‑1 (MQ=255)
gggTCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCgca > 2:145228/1‑101 (MQ=255)
ggTCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCgcag < 1:4877796/101‑1 (MQ=255)
ggTCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCgcag < 1:924036/101‑1 (MQ=255)
ggTCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCgcag < 2:591611/101‑1 (MQ=255)
tCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCgcagca < 2:1498335/101‑1 (MQ=255)
tGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCaaa > 1:3015070/1‑101 (MQ=255)
ggATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAAc < 1:3859813/101‑1 (MQ=255)
gATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACt > 1:2238947/1‑101 (MQ=255)
aTGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTg < 1:601288/101‑1 (MQ=255)
aTGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTg > 1:1417020/1‑101 (MQ=255)
tGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTgc > 1:5079487/1‑101 (MQ=255)
gTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTgcg < 1:885953/101‑1 (MQ=255)
tCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTgcgc > 2:4828007/1‑101 (MQ=255)
cGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGcgcg < 1:4394368/101‑1 (MQ=255)
gAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCgcgg > 1:3820258/1‑101 (MQ=255)
gAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCgcgg > 2:5611277/1‑101 (MQ=255)
aaaaGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCgcggcg < 2:2390358/101‑1 (MQ=255)
aaGGCCGCGGCAGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGAt < 2:1341558/101‑1 (MQ=255)
aGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATg < 2:3547957/101‑1 (MQ=255)
aGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATg > 2:1182431/1‑101 (MQ=255)
ggCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGt < 1:3117020/101‑1 (MQ=255)
gCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTc > 2:3672644/1‑101 (MQ=255)
gCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTc < 2:4440185/101‑1 (MQ=255)
cgcgACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCgg > 2:80507/1‑101 (MQ=255)
cgcgACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCgg > 1:3351497/1‑101 (MQ=255)
gcgACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCggg > 1:233033/1‑101 (MQ=255)
gcgACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCggg > 2:3853887/1‑101 (MQ=255)
gACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGgtg > 1:2368198/1‑101 (MQ=255)
aCCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGgtgt < 2:3764036/101‑1 (MQ=255)
aCCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCGCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGgtgt < 1:1043525/101‑1 (MQ=255)
ccGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGtt < 2:5029237/101‑1 (MQ=255)
gTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGc > 2:277121/1‑101 (MQ=255)
gTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGc > 1:2009753/1‑101 (MQ=255)
cccGCGCGTGGCACTGCCAGATCTCGATCACCTCCTGGGTGGC.GG.GGGCCTCGATCTCGCCCCCCATCGCAGCAAACTGCGCGGCGATGTGGGGTGTTGcc < 1:145248/100‑1 (MQ=255)
ccGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCa < 1:1784190/101‑1 (MQ=255)
cgcgcgTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCAc < 1:4664491/101‑1 (MQ=255)
cgTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACa < 1:3935901/101‑1 (MQ=255)
cgTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACa > 2:5467980/1‑101 (MQ=255)
gTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAg < 1:4515323/101‑1 (MQ=255)
gTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAg > 2:4917568/1‑101 (MQ=255)
gTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAg > 2:2009472/1‑101 (MQ=255)
gTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAg > 1:2830136/1‑101 (MQ=255)
tGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAgg < 1:5317587/101‑1 (MQ=255)
ggCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGt < 1:5188369/101‑1 (MQ=255)
gCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTc < 2:3177742/101‑1 (MQ=255)
cACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCg > 1:2414419/1‑101 (MQ=255)
cACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCg < 1:1169205/101‑1 (MQ=255)
cACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTAGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCg < 1:2158559/101‑1 (MQ=255)
tGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCt < 2:2238821/101‑1 (MQ=255)
tGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCt < 1:2534137/101‑1 (MQ=255)
gCCAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCtt < 2:897824/101‑1 (MQ=255)
ccAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTg < 2:3253913/101‑1 (MQ=255)
ccAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTg > 1:3644023/1‑101 (MQ=255)
cAGATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTgg > 2:3956226/1‑101 (MQ=255)
aGATCTCGATCACATCCTCGGTGACAGG.GGC.CTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGa > 2:501771/1‑101 (MQ=255)
gATCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGAt < 2:2958420/101‑1 (MQ=255)
aTCTCGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGATc < 2:2045510/101‑1 (MQ=255)
ctcGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGATCGa > 1:4202713/1‑101 (MQ=255)
ctcGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGATCGa > 2:4318055/1‑101 (MQ=255)
cGATCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGATCGAcc > 1:3983052/1‑101 (MQ=255)
aTCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGATCGACCCg < 1:1521207/101‑1 (MQ=255)
aTCACATCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGATCGACCCg < 1:574289/101‑1 (MQ=255)
cacaTCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGATCGACCCGGc > 1:3232652/1‑101 (MQ=255)
cacaTCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGATCGACCCGGc > 2:5315329/1‑101 (MQ=255)
ccaTCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGATCGACCCGGcc < 2:1733014/100‑1 (MQ=255)
aTCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCTCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGATCGACCCGGCCCa < 1:4036437/101‑1 (MQ=255)
aTCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGATCGACCCGGCCCa < 1:3421182/101‑1 (MQ=255)
aTCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGATCGACCCGGCCCa > 1:1691094/1‑101 (MQ=255)
tCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGATCGACCCGGCCCAg < 1:1570373/101‑1 (MQ=255)
tCCTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGATCGACCCGGCCCAg < 2:3973710/101‑1 (MQ=255)
ccTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGATCGACCCGGCCCAGc < 2:3351292/101‑1 (MQ=255)
ccTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGATCGACCCGGCCCAGc < 1:504830/101‑1 (MQ=255)
cTCGGTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGATCGACCCGGCCCAGcc > 1:4776008/1‑101 (MQ=255)
gTGAC.GG.GGGCCTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGATCGACCCGGCCCAGCcgcgc < 2:1612069/101‑1 (MQ=255)
tgccggg.ggc.CTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGATCGACCCGGCCCAGCcgcgcg > 1:4274053/6‑101 (MQ=255)
cggg.ggc.CTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGATCGACCCGGCCCAGCCGCGCGCAg > 1:5456045/3‑101 (MQ=255)
ggg.ggc.CTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGATCGACCCGGCCCAGCCGCGCGCAGa > 2:2303361/2‑101 (MQ=255)
gg.ggc.CTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGATCGACCCGGCCCAGCCGCGCGCAGAt > 2:5116715/1‑101 (MQ=255)
g.ggc.CTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGATCGACCCGGCCCAGCCGCGCGCAGATc < 1:1496042/101‑1 (MQ=255)
|
GTGCACCTCGGTCACCCGCCACTGGGTCTGGATGTCGAAAAAGGCCGCGACCGTCCGCGCGTGGCACTGCCAGATCTCGATCACATCCTCGGTGAC.GG.GGG.CTCGATCTCGGCCCCCATCGCAGCAAACTGCGCGGCGATGTCGGGTGTTGCCACGACAGGTCGGCTTGGATCGACCCGGCCCAGCCGCGCGCAGATC > NC_014034/1065745‑1065942
Base quality scores:
ATCG
< 3 ≤
ATCG
< 24 ≤
ATCG
< 30 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|