| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 257,088 | +G | 1.8% | intergenic (+22/‑177) | secA → / → RCAP_rcc00221 | preprotein translocase subunit SecA/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 257,088 | 1 | .→G | 1.8% | 4.4 ‑3.4 ‑0.3 | 224 | intergenic (+22/‑177) | secA/RCAP_rcc00221 | preprotein translocase subunit SecA/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (4/0): ref base (92/128): total (96/128) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.25e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.47e-01 | ||||||||||
Only 100 of 249 total aligned reads displayed.
GGGCGAGCCCTCGCGCAATGACCCCTGCCCCTGCGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GCCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTGTGGAAATTTCCGGCCGGGCGAAGGTTTCCGTTTCG > NC_014034/256988‑257186
|
ggCGAGCCCTCGCGCAATGACCCCTGCCCCTGCGGCTCGGGCGAGAAGTTCAAGCACTGCCCCGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGgc.g > 1:1415270/1‑101 (MQ=255)
cGAGCCCTCGCGCAATGACCCCTGCCCCTGCGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGgc.ggc < 1:823089/101‑3 (MQ=255)
aGCCCTCGCGCAATGCCCCCTGCCCCTGCGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCgg < 2:3920915/101‑1 (MQ=255)
gCCCTCGCGCAATGACCCCTGCCCCTGCGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGt < 1:4771700/101‑1 (MQ=255)
ccTCGCGCAATGACCCCTGCCCCTGCGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGG.cc > 2:4081380/1‑101 (MQ=255)
cTCGCGCAATGACCCCTGCCCCTGCGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCg < 1:3785243/101‑1 (MQ=255)
cgcgCAATGACCCCTGCCCCTGCGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCggg < 2:4921948/101‑1 (MQ=255)
cgcAATGACCCCTGCCCCTGCGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGt < 2:803377/101‑1 (MQ=255)
cgcAATGACCCCTGCCCCTGCGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGt < 2:4308110/101‑1 (MQ=255)
cgcAATGACCCCTGCCCCTGCGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGt < 2:4166471/101‑1 (MQ=255)
cgcAATGACCCCTGCCCCTGCGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGt < 1:4096512/101‑1 (MQ=255)
gcAATGACCCCTGCCCCTGCGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTg < 1:4081627/101‑1 (MQ=255)
aaggACCCCTGCCCCTGCGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGGGGG.CCggggggga > 1:3303858/4‑97 (MQ=255)
aaTGACCCCTGCCCCTGCGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGG.CCcgggggga > 2:935861/1‑97 (MQ=255)
aTGACCCCTGCCCCTGCGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGGGGG.CCgggggggac > 1:5448372/1‑96 (MQ=255)
gACCCCTGCCCCTGCGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGGGGAccc > 2:1619275/1‑101 (MQ=255)
aCCCCTCCCCCTGCGGTTGGGGCGAGAAGTTCAAGCACTGCCACGGACGTCTGGCCTGAAACAAAGGCGGTGAAATATGGC.GGCCGT.CCGGGGTGAACCCg < 2:3726852/101‑1 (MQ=255)
ccctgcccctgcGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCggg < 1:3752560/101‑1 (MQ=255)
cctgcccctgcGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGCGGGGGGG.CGGGGGGGAACCCggc > 2:2222595/1‑100 (MQ=255)
cctgcccctgcGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGCGGGGGGG.CCGGGGGGAACCCggc > 1:2717792/1‑100 (MQ=255)
cctgcccctgcGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGCGGCGGGT.CGGGGGGGACCCCggg > 1:1032791/1‑101 (MQ=255)
cctgcccctgcGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGgc < 1:1619369/101‑1 (MQ=255)
ctgcccctgcGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGgcc < 1:2609598/101‑1 (MQ=255)
cnnccnctgcGGCTAGGNCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGgcc < 2:1497403/101‑1 (MQ=255)
gcccctgcGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGGGGG.GCGGGGGGGACCCCGggcg.c > 2:3175399/1‑101 (MQ=255)
cccctgcGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGgccg.cc < 1:5660888/101‑1 (MQ=255)
ccctgcGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGccg.ccg < 2:3357304/101‑1 (MQ=255)
cctgcGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGGGGT.CCGGGGGGGACCCGGGgcg.ccgg > 2:863804/1‑100 (MQ=255)
ctgcGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGCGGGGGGT.CGGGGGGGAACCCCGgcgccgct > 2:841717/1‑95 (MQ=255)
ctgcGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGGGGG.GCGGGGGGGGACCGGGgcg.ccggt > 1:2125953/1‑99 (MQ=255)
tgcGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGttt < 2:4472563/101‑1 (MQ=255)
tgcGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGttt < 1:2570336/101‑1 (MQ=255)
tgcGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGttt < 2:1817540/101‑1 (MQ=255)
cGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGttttt < 2:306215/101‑1 (MQ=255)
ggCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTc < 1:1237121/101‑1 (MQ=255)
gCTCGGGCGAGAAGGTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCa < 2:1858550/101‑1 (MQ=255)
cGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGG.CCGGGGGGGACCCCGGGCG.CCGGTTTTCCttt > 2:2923099/1‑100 (MQ=255)
gggCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGG.CCGGGGGGAACCCGGGCCG.CCGGTTTTTATTAt > 2:2942277/1‑101 (MQ=255)
ggCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGGGAAACCCGGCCG.CCGGTTTTCATTATc > 2:4389021/1‑101 (MQ=255)
gCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGCGGGGGGG.CGGGGGGGAACCGGGGCCG.CCGTTTTTCTTTTTc > 2:2028654/1‑101 (MQ=255)
gCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGG.CCGGGGGGAACCCCGGCCG.CCGGTTTTTATTATcc > 1:5275775/1‑101 (MQ=255)
cGAGAAGTTCAAGCACTGCCACGGCGCTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCt < 1:4858672/101‑1 (MQ=255)
cGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGAC.GGCGGG.CCCGGGGGGAACCGGGGCG.CCGTTTTTTATTATccc > 1:359801/1‑100 (MQ=255)
gagaAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCGGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTg < 1:2995354/101‑1 (MQ=255)
agaAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGt < 2:3008833/101‑1 (MQ=255)
gaAGTTCAAGCGCTGCCCCGGCCGTCTGGCCTGAAACAAAGTCGCTCAAATAGGGC.GGGGGT.CCGGGGTGCACCCGGGCCG.CCGTTTTTCATTATCCTGtt < 1:3648204/101‑1 (MQ=255)
gaAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGG.CCGGGGGGAACCCGGGGCGCCCGTTTTTCTTTTTctttt > 2:5077579/1‑97 (MQ=255)
aaGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGG.CCGGGGGGAACCCGGGCCG.CCGGTTTTTCTTATCCTTTTg > 1:601156/1‑101 (MQ=255)
aGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGa < 1:863880/101‑1 (MQ=255)
cAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTg < 1:2015138/101‑1 (MQ=255)
gCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGat < 2:189068/101‑1 (MQ=255)
gCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGat < 2:4503720/101‑1 (MQ=255)
cACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGat.a < 1:4438176/101‑1 (MQ=255)
cACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGat.a < 1:1501106/101‑1 (MQ=255)
cACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGat.a < 1:3514037/101‑1 (MQ=255)
cACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGG.CCGGGGGGAACCCCGGCCG.GCGGTTTTTATTATTCTTtttttttgggtt > 2:5478604/1‑91 (MQ=255)
aCTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGGGAACCCGGGCCG.CCGGTTTTTATTATCCTGTTGATCTGGat.at > 1:5129305/1‑101 (MQ=255)
cTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATg < 1:3128201/101‑1 (MQ=255)
tGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGGGGTCCCGGGGGGAAACCGGGCGG.CGGTTTTT.ATTTTTCTGTTTTACTGGat.attt > 2:1739713/1‑99 (MQ=255)
ccACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGttt < 2:2588655/101‑1 (MQ=255)
cACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGtttt < 2:4017755/101‑1 (MQ=255)
aCGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGGGAAACCGGGCCG.CCGCTTTTTATTTTCCTGTTGATCTGGAT.AAGttttt > 2:4989866/1‑101 (MQ=255)
ggCCGTCTGGATTCAATCAAAGTCGCAGAAATAGGGC.ATAAGC.TCGCGGTGCGCCCGGGCCG.CCGTTTTTCATTATCCTGTTGAACTTGAT.ATGTTTTtgt < 2:1334073/101‑1 (MQ=255)
ggCCGTCGGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTtgt < 2:323450/101‑1 (MQ=255)
gCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTtgtg < 1:5231209/101‑1 (MQ=255)
ccGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTGTgg < 1:2909732/101‑1 (MQ=255)
cGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTGTGGa < 2:2717643/101‑1 (MQ=255)
cGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTGTGGa < 1:1158424/101‑1 (MQ=255)
cGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGGGAACCCGGGCCG.CCGTTTTTTCTTATCCTGTTGATCTGGAT.ATGTTTTTTTGGa > 2:3683544/1‑101 (MQ=255)
gTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGG.CCGGGGGGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTTTggga > 2:1038963/1‑99 (MQ=255)
tCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGGGAACCCGGGCCG.CCGGTTTTTATTATCCTGTTTATCTGGAT.ATGTTTTTGTGGaaa > 1:1143676/1‑101 (MQ=255)
tCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGG.CCGGGGGGAACCCGGGCCG.CCGGTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTTTGGaaa > 1:390460/1‑101 (MQ=255)
tGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTGTGGAAAtt < 2:4627969/101‑1 (MQ=255)
tGGCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGGGAACCCGGGCCG.CCGGTTTTCATTATCCTGTTGATCTGGGT.ATGTTTTTTTGGAAAtt > 2:5822/1‑101 (MQ=255)
ggCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTGTGGAAAttt < 1:2317033/101‑1 (MQ=255)
ggCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTGTGGAAAttt < 1:5754416/101‑1 (MQ=255)
ggCCGGAAACAAAGGCGCTGAAATATGGC.GGCGTT.CGGGGGTGAACCCGGCCCG.CCGTTTTTTATTATCCTGTTGATCTGGAT.ATGTTTTTGTGGAAAttt < 2:2554975/101‑1 (MQ=255)
gCCTGAAACAAAGGCGCTGAAATATGGC.GGTGGG.CCGGGGGGAACCCGGGCCG.CCCGTTTTTATTTTTCTGTTGTTTTGGGTGTTGTTTTGGTGGAATttc > 1:2562043/1‑100 (MQ=255)
gCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTGTGGAAATTTc < 1:3257022/101‑1 (MQ=255)
gCCTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGGGAACCCCGGGCG.CCGTTTTTTATTATCCTGTTTATCTGGGT.ATGTTTTTTTGGAAAtttt > 1:90298/1‑100 (MQ=255)
ccTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTGTGGAAATTTcc < 1:4239291/101‑1 (MQ=255)
ccTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTGTGGAAATTTcc < 1:4370706/101‑1 (MQ=255)
ccTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGGGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTTTGGAAATTTcc > 1:5510748/1‑101 (MQ=255)
ccTGAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGGGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTGTGGAAATTTcc > 2:3548466/1‑101 (MQ=255)
ccTGAAACAAAGGCGCTGAAATATGGC.GGCGGG.CCGGGGGGAACCCCGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTGTGGAAATTTcc > 1:1779916/1‑101 (MQ=255)
gAAACAAAGGCGCTGAAATATGGC.GGCGGT.CCGGGGGGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTTTGGAAATTTccggc > 1:3629026/1‑101 (MQ=255)
aaaGGCGCTGAAATATGGC.GGCGGT.CCGGGGGGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTTTGGAAATTTCCCGCCGGGc > 1:1464458/1‑101 (MQ=255)
aaaGGCGCTGAAATATGGC.GGCGGT.CCGGGGGGAACCCCGGGCG.CCGGTTTTCATTATCCTGTTGATCCGGGT.ATGTTTTTTTGGAAATTTCCGGCCGGGc > 1:4573800/1‑101 (MQ=255)
aGGCGCTGAAATATGGC.GGCGGT.CCGGGGGGAACCCGGGCCG.CCGTTTTTCATTATCCCGTTGATCTGGAT.ATGTTTTTTTGGAAATTTCCGGCCGGGCGa > 2:4663120/1‑101 (MQ=255)
gcgcTGAAATAGGGC.GGGGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTGTGGAAATTTCCGGCCGGGCGAAg < 2:4880592/101‑1 (MQ=255)
cgcTGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTGTGGAAATTTCCGGCCGGGCGAAgg < 2:1456549/101‑1 (MQ=255)
cgcTGAAATATGGC.GGCGGT.CCGGGGGGAACCCGGGGCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTTTGGAAATTTCCGGCCGGGCGAAgg > 1:5029668/1‑101 (MQ=255)
cgcTGAAATATGGC.GGCGGT.CCGGGGGGAACCCGGGCCG.CCGGTTTTTATTATTCTGTTGATCTGGAT.ATGTTTTTGTGGAAATTTTCGGCCGGGCGGAgg > 2:614061/1‑101 (MQ=255)
tGAAATATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTGTGGAAATTTCCGGCCGGGCGAAGGttt < 1:3388107/101‑1 (MQ=255)
tGAAATATGGC.GGCGGT.CCGGGGGGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTGTGGAAATTTCCGGCCGGGCGAAGGttt > 2:5336986/1‑101 (MQ=255)
aaaTATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTGTGGAAATTTCCGGCCGGGCGAAGGTTTcc < 2:4398866/101‑1 (MQ=255)
aaTATGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTTTCCTGTTGATCTGGAT.ATGTTTTTGTGGAAATTTCCGGCCGGGCGAAGGTTTCCg > 1:3961707/1‑101 (MQ=255)
tGGC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTGTGGAAATTTCCGGCCGGGCGAAGGTTTCCGTTTc > 2:2443380/1‑101 (MQ=255)
ggC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTGTGGAAATTTCCGGCCGGGCGAAGGTTTCCGTTTCg > 2:3949264/1‑101 (MQ=255)
ggC.GGCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTGTGGAAATTTCCGGCCGGGCGAAGGTTTCCGTTTCg > 1:2235468/1‑101 (MQ=255)
|
GGGCGAGCCCTCGCGCAATGACCCCTGCCCCTGCGGCTCGGGCGAGAAGTTCAAGCACTGCCACGGCCGTCTGGCCTGAAACAAAGGCGCTGAAATATGGC.GCCGGT.CCGGGGTGAACCCGGGCCG.CCGTTTTTCATTATCCTGTTGATCTGGAT.ATGTTTTTGTGGAAATTTCCGGCCGGGCGAAGGTTTCCGTTTCG > NC_014034/256988‑257186
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|