| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 408,497 | +A | 83.2% | intergenic (+115/+33) | glnA1 → / ← dapA | glutamine synthetase/dihydrodipicolinate synthase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 408,497 | 5 | .→A | 83.2% | 92.6 ‑1.3 0.0 | 173 | intergenic (+115/+33) | glnA1/dapA | glutamine synthetase/dihydrodipicolinate synthase |
| Reads supporting (aligned to +/- strand): new base (97/47): ref base (16/13): total (113/60) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.85e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 188 total aligned reads displayed.
CTGCCCCCAGACCCCC.GGG.ATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGCAAAGACGGGGG.....GC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGC > NC_014034/408396‑408571
|
ctGCCCCCAGACCCCC.GGG.ATATTTTCGGGAAGATGAAACCGATGTCCTTCATCTTGCCCCAAATATCCCCGGGGGGGGCTT.GCTTGAAGC.AAGAAggggg > 1:3020923/1‑101 (MQ=18)
ctGCCCCCAGACCCCC.GGG.ATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.ACGACggggg > 2:990086/1‑101 (MQ=255)
ctGCCCCCAGACCCCC.GGG.ATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACggggg > 2:1661017/1‑101 (MQ=255)
cccccccAGACCCCC.GGG.ATATTGGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACggggg.....g < 1:102399/99‑1 (MQ=255)
tcgcctcaCCCCC.GGG.ATATTTGGGGCAAGATAAACCCCAT.CCTTTCACCTTGCAGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGgggggca > 2:4528503/8‑99 (MQ=25)
cccccGGCCCCCC.GGA.ATGTTTGCGGCAAGATGAACCCTATGTCCTTCATCTCGCCCCAAATCTCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....Gca < 1:2200130/101‑2 (MQ=25)
cccccAGACCCCC.GGG.ATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....Gca > 2:1576995/1‑100 (MQ=255)
ccccAGCCCCCCGGGG.ATTTTTGGGGAAAGAGAAACCCGTTGTCCTTCATCTTGCCAAAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....Gca < 2:1179645/101‑2 (MQ=16)
cctcaCCCCC.GGG.ATATTTGGGGCAAGATAAACCCCAT.CCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGgggggaagcg > 2:3446707/5‑96 (MQ=25)
cccacccccc.GGGTATTTTGGCGGAAAGAGGAACCCGATGCCCTTCATCTGCCCCAAAATACCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....Gcaga < 1:61316/96‑4 (MQ=255)
ccaccccccg.GGG.ATTTTTGCGGAAAGATGAAGCCGATTTCCTTCATCTTGCCCCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....Gcagag < 1:2139803/96‑5 (MQ=21)
ccAGACCCCC.GGG.ATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....Gcagag > 1:980526/1‑97 (MQ=255)
ccAGACCCCC.GGG.ATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....Gcagag < 2:3082937/101‑5 (MQ=255)
ccAGACCCCC.GGG.ATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....Gcagag > 2:3848560/1‑97 (MQ=255)
cAGACCCCC.GGG.ATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....Gcagagc > 2:3223597/1‑96 (MQ=255)
cAGACCCCC.GGG.ATATTTGCGGCAAGATGAAGCCGATGTACTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....Gcagagc > 2:4801595/1‑96 (MQ=25)
aGACCCCC.GGG.ATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....Gcagagcc < 1:2845621/101‑7 (MQ=255)
aGACCCCC.GGG.ATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....Gcagagcc > 2:3552821/1‑95 (MQ=255)
aCCCCC.GGG.ATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....Gcagagcccc > 2:3370663/1‑93 (MQ=37)
aCCCCC.GGG.ATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....Gcagagcccc > 1:236727/1‑93 (MQ=25)
cccc.GGG.ATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....Gcagagcccccc > 1:1781960/1‑91 (MQ=25)
tGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGcc < 2:3742754/101‑1 (MQ=21)
tGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGcc < 2:2096899/101‑1 (MQ=21)
tGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGcc > 1:2398446/1‑101 (MQ=21)
gCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCa < 2:5319437/101‑1 (MQ=21)
gCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCa < 1:1766517/101‑1 (MQ=21)
gCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCa < 2:1841678/101‑1 (MQ=21)
gCGGAAAGAGGAAGCGGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCa < 2:108804/101‑1 (MQ=18)
ggCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCaaa < 1:4598597/101‑1 (MQ=21)
ggCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCaaa > 1:3190762/1‑101 (MQ=21)
gCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCaaaa > 1:3587120/1‑101 (MQ=21)
cAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAg > 2:2780670/1‑101 (MQ=21)
cAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAg > 1:473187/1‑101 (MQ=21)
cAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAg > 1:337888/1‑101 (MQ=21)
aaGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCCCAGGTCGCCAAAAgg > 2:4631002/1‑101 (MQ=18)
aaGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAgg > 1:5786586/1‑101 (MQ=21)
aGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGga < 2:2679244/101‑1 (MQ=21)
gATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGgac > 2:4449198/1‑101 (MQ=21)
aaTGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGgac < 2:4041566/100‑1 (MQ=21)
aggAAGCCGTGCTCCTCCATCTTGCCGAAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGgacc < 2:4118179/99‑1 (MQ=16)
aTGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGgacc > 2:1507087/1‑101 (MQ=21)
tGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGgaccg > 2:4322055/1‑101 (MQ=21)
gAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGgaccga > 2:571138/1‑101 (MQ=21)
gAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGgaccga > 1:1711927/1‑101 (MQ=21)
aaGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCCCAGGTCGCCAAAAGgaccgac > 1:2077643/1‑101 (MQ=18)
aGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGgaccgacc > 2:3776741/1‑101 (MQ=21)
aGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGgaccgacc > 1:4460521/1‑101 (MQ=21)
cGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCa > 1:1520325/1‑101 (MQ=21)
gATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAg > 2:3353361/1‑101 (MQ=21)
aTGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGa < 1:4475450/101‑1 (MQ=21)
aTGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGa < 2:1739890/101‑1 (MQ=21)
aTGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGa > 2:5072390/1‑101 (MQ=21)
aTGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGCCGCCAAAAGGACCGACCTCAGa > 1:3701655/1‑101 (MQ=18)
tGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGAt > 2:2081178/1‑101 (MQ=21)
tGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTAAGAt > 2:1472100/1‑101 (MQ=18)
gcctttCATTTTGCCGAAAATCCCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATc < 2:1983984/97‑1 (MQ=255)
gTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATc < 1:4148961/101‑1 (MQ=21)
gTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGAACGACCTCAGATc > 2:2313220/1‑101 (MQ=18)
tCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCa < 1:4445197/101‑1 (MQ=21)
ccTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAg > 1:4504492/1‑101 (MQ=21)
ccTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAg > 1:3899436/1‑101 (MQ=21)
cTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGc > 2:4504888/1‑101 (MQ=21)
ttCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGcc > 1:1696413/1‑101 (MQ=21)
ttCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGcc < 1:774441/101‑1 (MQ=21)
tCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGccc > 1:2272957/1‑101 (MQ=21)
tCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGG.....GCAGAGCCCCCAGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGccc > 1:4031706/1‑101 (MQ=21)
cagcTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCg < 2:603447/98‑1 (MQ=21)
cATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCg > 2:4652276/1‑101 (MQ=21)
aTCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCgg > 1:4791578/1‑101 (MQ=21)
tCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGc > 1:3039049/1‑101 (MQ=21)
cTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCg > 1:5353128/1‑101 (MQ=25)
gCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGc > 1:5283650/1‑101 (MQ=25)
gCAAATATCCCGGGGGGAGGCTT.GCTGAAAG.AAAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGc > 2:5089151/1‑101 (MQ=37)
cAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCa < 2:4473240/101‑1 (MQ=255)
aaaTATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGGGTGTTGCAt > 1:2642795/1‑101 (MQ=25)
aaaTATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCAt > 1:5111679/1‑101 (MQ=37)
aaTATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATc < 1:1586596/101‑1 (MQ=255)
aaTATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATc < 2:3491330/101‑1 (MQ=255)
aaTATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATc < 2:2357177/101‑1 (MQ=255)
aaTATCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATc > 2:2511438/1‑101 (MQ=255)
atttCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATcg < 1:4873262/98‑1 (MQ=255)
atCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATcgcg < 2:3431615/101‑1 (MQ=255)
tCCCGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCgcgg > 2:1365641/1‑101 (MQ=255)
ccGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCgcggcg > 2:4244469/1‑101 (MQ=255)
cGGGGGGAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGt > 1:4250653/1‑101 (MQ=255)
ggggggAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTc > 1:111217/1‑101 (MQ=255)
ggggggAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTc > 2:1497067/1‑101 (MQ=255)
gggggAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCa > 1:4151875/1‑101 (MQ=255)
gggggAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCa > 2:896863/1‑101 (MQ=255)
gggggAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATAAGCCCGGCGTGTTGCATCGCGGCGTCa > 2:1141979/1‑101 (MQ=255)
gggggAGGCTT.GCCGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCa < 1:351871/101‑1 (MQ=255)
ggAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTGGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGGTGCATCGCGGCGTCAAgc > 2:4550452/1‑101 (MQ=255)
ggAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgc > 2:284588/1‑101 (MQ=255)
gAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgcg > 1:5789893/1‑101 (MQ=255)
gAGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgcg > 2:1674254/1‑101 (MQ=255)
aGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgcgc > 2:4948982/1‑101 (MQ=255)
aGGCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgcgc > 1:815985/1‑101 (MQ=255)
gCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCgg > 2:514241/1‑101 (MQ=255)
gCTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCgg > 2:556449/1‑101 (MQ=255)
cTT.GCTGAAAGC.AAGACGGGGGGCAGAGC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGc > 2:3063902/1‑101 (MQ=255)
|
CTGCCCCCAGACCCCC.GGG.ATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGCAAAGACGGGGG.....GC....CCCCC.GCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGC > NC_014034/408396‑408571
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|