BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	580,954	+A	100%	intergenic (+75/‑296)	RCAP_rcc00541 → / → RCAP_rcc00542	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	580,954	1	.→A	100.0%	812.6	214	intergenic (+75/‑296)	RCAP_rcc00541/RCAP_rcc00542	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): new base (98/110): ref base (1/2): total (101/113)

Only 100 of 242 total aligned reads displayed.


GTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.T.A.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAAC  >  NC_014034/580854‑581049


gTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.t                                                                                                     <  1:5417195/101‑1 (MQ=255)


 tGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCCGGATATTTGAGGCAAG.A.T.a                                                                                                   >  2:1886490/1‑101 (MQ=255)


 tGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGATGCCCCCTCTTTCGGCTGCGCCGAAATTTA.CCCCCGGGATATTTGAGGCAAG.A.T.a                                                                                                   >  2:4763294/1‑101 (MQ=255)


  gACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.T.a.a                                                                                                 >  2:5503401/1‑101 (MQ=255)


     aaGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.T.a.aacg                                                                                              <  1:2944630/101‑4 (MQ=255)


      aGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.T.a.aacgg                                                                                             <  2:3208471/101‑5 (MQ=255)


        gtgtTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGTGAATTGAGGGAAG.C.TAA.A.CGGgc                                                                                           >  2:654230/1‑101 (MQ=25)


          gtTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGgcgc                                                                                         <  1:2203882/101‑1 (MQ=255)


             ccGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCC.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTa                                                                                      <  1:4120510/101‑1 (MQ=255)


             ccGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTa                                                                                      <  2:126705/101‑1 (MQ=255)


             ccGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTa                                                                                      <  2:3288902/101‑1 (MQ=255)


               gCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATc                                                                                    <  1:5100115/101‑1 (MQ=255)


                    gATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCtt                                                                              <  2:1063760/101‑1 (MQ=255)


                      ttGAGGCGGCCCGGGCAGGGGGCGGTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTgg                                                                            >  1:1838789/1‑101 (MQ=255)


                       tGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGt                                                                           <  1:1345007/101‑1 (MQ=255)


                          ggcggcCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGGGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCa                                                                        >  1:4773301/1‑101 (MQ=255)


                            cggcCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCaaa                                                                      <  1:5613135/101‑1 (MQ=255)


                             ggcCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAat                                                                     <  2:2877857/101‑1 (MQ=255)


                              gcCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAata                                                                    <  1:5259866/101‑1 (MQ=255)


                              gcCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAata                                                                    <  1:3414569/101‑1 (MQ=255)


                               cccGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAatat                                                                   <  1:1987970/101‑1 (MQ=255)


                                ccGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATc                                                                  <  2:203076/101‑1 (MQ=255)


                                ccGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.T.ACA.CGGGCGCCTATCA.CCTTGGTGCAAATATc                                                                  <  1:5148480/101‑1 (MQ=255)


                                 cGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATcc                                                                 <  2:3119718/101‑1 (MQ=255)


                                  gggCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCg                                                                >  2:3673850/1‑101 (MQ=255)


                                  gggCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAAATCA.CCCCCGGGACATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCg                                                                >  1:3715180/1‑101 (MQ=25)


                                     cAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCgggt                                                             <  1:4625091/101‑2 (MQ=255)


                                     cAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCgggg                                                             <  1:4462446/101‑1 (MQ=255)


                                     cAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCgggg                                                             >  2:756820/1‑101 (MQ=255)


                                      aGGGGGCGCTGCCCCCTCTTTTGGCTGGGCCCAAATTTA.CCCCCCGGGTATTTTAGGCAAGAA.A.A.A.AGGGGGCCCCTCACCCTTGGGGCAAA.AACCggggg                                                            >  1:4187574/1‑101 (MQ=2)


                                        ggggCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCggggggg                                                          >  2:5401334/1‑100 (MQ=255)


                                        ggggCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGt                                                          <  1:1730814/101‑1 (MQ=255)


                                             gcTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGc                                                     <  1:639819/101‑1 (MQ=255)


                                             gcTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGGGAGGc                                                     >  1:2695054/1‑101 (MQ=255)


                                              cTGCCCCCTCTTTCGGCTTCGCTGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGcc                                                    <  2:606903/101‑1 (MQ=37)


                                              cTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGcc                                                    <  1:946511/101‑1 (MQ=255)


                                               tGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGGGAGGCCg                                                   >  1:307755/1‑101 (MQ=255)


                                                   cccTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAg                                               <  1:2511808/101‑1 (MQ=255)


                                                     ctctTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGcc                                             >  2:1970501/1‑101 (MQ=255)


                                                      tctTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCg                                            >  1:4341796/1‑101 (MQ=255)


                                                       ctTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGa                                           >  2:2188960/1‑101 (MQ=255)


                                                       ctTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGa                                           <  2:1098417/101‑1 (MQ=255)


                                                        tttCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAg                                          >  2:294054/1‑101 (MQ=255)


                                                          tCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGGAAATATCCGGGGGGCGAGGCCGAAAGCCGAggg                                        >  1:4924265/1‑101 (MQ=37)


                                                           cGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAgggg                                       <  2:4039428/101‑1 (MQ=255)


                                                           cGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAgggg                                       >  2:2391100/1‑101 (MQ=255)


                                                            ggCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAggggg                                      <  1:3994099/101‑1 (MQ=255)


                                                            ggCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAggggg                                      >  2:152611/1‑101 (MQ=255)


                                                             gCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGc                                     >  1:5521744/1‑101 (MQ=255)


                                                              cTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCa                                    <  1:5178932/101‑1 (MQ=255)


                                                               tGCGCCGAAATTCG.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAg                                   <  2:286399/101‑1 (MQ=255)


                                                               tGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAg                                   >  1:3832754/1‑101 (MQ=255)


                                                               tGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAg                                   <  1:280484/101‑1 (MQ=255)


                                                               tGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAg                                   >  1:152652/1‑101 (MQ=255)


                                                                ttcggccaaTTCACCCCCCGGGATATTTGCGGCAAG.G.TGA.A.AGGATGGGGTTTA.TCTTGCCCCAAATATCCCGGGGGTGAGG.CG.AAGCCGAGGGGGCAgcg                                 >  2:1161212/8‑101 (MQ=37)


                                                                ttcggccaaTTCACCCCCCGGGATATTTGCGGCAAG.G.TGA.A.AGGATGGGGTTTA.TCTTGCCCCAAATATCCCGGGGGTGAGG.CG.AAGCCGAGGGGGCAgcg                                 <  2:4275158/94‑1 (MQ=37)


                                                                 cgcCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAgcg                                 <  2:2634623/101‑1 (MQ=255)


                                                                  gcCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAgcgc                                >  2:5059578/1‑101 (MQ=255)


                                                                  gcCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAgcgc                                <  2:3404587/101‑1 (MQ=255)


                                                                  gcCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAgcgc                                >  1:1164492/1‑101 (MQ=255)


                                                                      aaaTTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGccccc                            >  2:4648035/1‑101 (MQ=255)


                                                                       aaTTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCt                           >  2:3648492/1‑101 (MQ=255)


                                                                        aTTCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCtt                          <  2:4612193/101‑1 (MQ=255)


                                                                        aTTCA.ACCACGAGAAATTTGAGGCAAG.A.TAA.A.CTGGCTCCTATCG.CCTTGGTGCAAATATCCGGGTGGTGAGGCCGAAAGGCGAGGGGGCAGCGACCCCtt                          <  2:1660071/101‑1 (MQ=255)


                                                                         ttCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCttt                         <  2:4144388/101‑1 (MQ=255)


                                                                         ttCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCttt                         <  1:5066696/101‑1 (MQ=255)


                                                                         ttCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCttt                         >  2:379143/1‑101 (MQ=255)


                                                                          tCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCtttt                        <  2:1838679/101‑1 (MQ=255)


                                                                          tCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCtttt                        >  1:1285242/1‑101 (MQ=255)


                                                                          tCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCtttt                        <  2:4941509/101‑1 (MQ=255)


                                                                          tCA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCtttt                        >  1:2481676/1‑101 (MQ=255)


                                                                           cA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTc                       >  1:1564297/1‑101 (MQ=255)


                                                                           cA.CCCCCGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTc                       <  1:2834776/101‑1 (MQ=255)


                                                                              cccccGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTccc                     >  1:2126341/1‑101 (MQ=255)


                                                                                cacGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCAGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCcgt                   >  2:500611/3‑101 (MQ=255)


                                                                                 ccGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCcgtc                  >  1:3192968/1‑101 (MQ=255)


                                                                                 ccGGGATATTGGAGGCAAG.A.T.A.ACCGGGCTCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCcgtc                  <  1:1077047/101‑1 (MQ=37)


                                                                                 ccGGAATATTTGAGGGAAG.A.TAA.A.CGGGCGCCTGTCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCcgtc                  <  1:1413813/101‑1 (MQ=25)


                                                                                  cGGGATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCcgtcg                 <  1:826682/101‑1 (MQ=255)


                                                                                     gATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCgtgt              <  1:3596928/101‑1 (MQ=255)


                                                                                     gATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCgtgt              <  1:4751424/101‑1 (MQ=255)


                                                                                     gATATTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCgtgt              <  2:512762/101‑1 (MQ=255)


                                                                                      atatTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGtgtg             >  1:4246385/1‑101 (MQ=255)


                                                                                       tatTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTgg            >  2:874870/1‑101 (MQ=255)


                                                                                       tatTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTgg            >  2:3034278/1‑101 (MQ=255)


                                                                                       tatTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTgg            >  1:3136838/1‑101 (MQ=255)


                                                                                        atTTGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGa           >  2:3475130/1‑101 (MQ=255)


                                                                                          ttGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATc         <  2:1235935/101‑1 (MQ=255)


                                                                                          ttGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATc         >  2:5320166/1‑101 (MQ=255)


                                                                                          ttGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATc         <  1:5732570/101‑1 (MQ=255)


                                                                                          ttGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATc         <  1:5372131/101‑1 (MQ=255)


                                                                                          ttGAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATc         <  1:2643022/101‑1 (MQ=255)


                                                                                           tGAGGCAAG.AGA.A.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGGGGCCGAAAGCCGAGGGGACAGCGCCCCCTTTTCCCGTCGTGTGGATcg        >  2:4806358/1‑101 (MQ=255)


                                                                                            gAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATcgc       >  2:2693135/1‑101 (MQ=255)


                                                                                            gAGGCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATcgc       >  1:624698/1‑101 (MQ=255)


                                                                                              ggCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCgcgc     >  2:49157/1‑101 (MQ=255)


                                                                                               gCAAG.A.TAA.A.CGGGCGCCTATCA.CCTTTGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCa    <  1:2422187/101‑1 (MQ=255)


                                                                                                cAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCaa   <  2:4355601/101‑1 (MQ=255)


                                                                                                cAAG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCaa   <  1:5284866/101‑1 (MQ=255)


                                                                                                 aaG.A.TAA.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGCGTGGATCGCGCAAc  >  1:723066/1‑101 (MQ=255)


GTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.A.T.A.A.CGGGCGCCTATCA.CCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAAC  >  NC_014034/580854‑581049

Base quality scores:


ATCG

< 3 ≤


ATCG

< 17 ≤


ATCG

< 26 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG