Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_014034974,3100T→G100.0% 1.7 3intergenic (+190/+69)RCAP_rcc00884/RCAP_rcc00885hypothetical protein/hypothetical protein
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand):  new base (1/2):  ref base (0/0):  total (1/2)

CCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCG.TGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCC.GGGGT..GTGCG.GAAGCCCCCGGCGGGTCGCCTCGGCGACAGCCGAGGCGAAATACCCCCGCCGCAACGGCCGGTTCT  >  NC_014034/974214‑974379
                                                                                                    |                                                                      
cccAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCC.GGGG...GTGCg.g                                                                   >  2:5365681/1‑101 (MQ=255)
                                  cgggATCCGGCATGGCCGCTGCGCAGGGGCTTGTTTTCACCTTGCGACAAATACCCCGGGGGTCGGGGGGCGGAGCCCCCGGCGGGTCGCCTCGGCGACAg                                      <  1:1807502/101‑1 (MQ=9)
                                                       cgcAGCGGCTTGTTTTCCCCGTGCGACAAATATCCCGGGGGTCCGGGGGCGGAGCCCCCGGCGGGTCGCCTCGGCGACAGCCGAGGCGAAATACCCcggcc                 <  2:3714322/101‑1 (MQ=2)
                                                                      tCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCGGAGCCCCCGGCGGGGGGGCGCGGCGGCGGGCCAGGCGGAAAACCCCCGCCGCAGCGGcgcgggct  >  2:1952969/1‑94 (MQ=0)
                                                                                                    |                                                                      
CCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCG.TGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCC.GGGGT..GTGCG.GAAGCCCCCGGCGGGTCGCCTCGGCGACAGCCGAGGCGAAATACCCCCGCCGCAACGGCCGGTTCT  >  NC_014034/974214‑974379

Base quality scores:  ATCG  < 3 ≤  ATCG  < 5 ≤  ATCG  < 18 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG