Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 974,312 | 0 | C→G | 100.0% | 1.7 | 3 | intergenic (+192/+67) | RCAP_rcc00884/RCAP_rcc00885 | hypothetical protein/hypothetical protein |
Rejected: E-value exceeds prediction threshold. | ||||||||||
Reads supporting (aligned to +/- strand): new base (1/2): ref base (0/0): total (1/2) |
CCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCG.TGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCC.GGGGT..GTGCG.GAAGCCCCCGGCGGGTCGCCTCGGCGACAGCCGAGGCGAAATACCCCCGCCGCAACGGCCGGTTCT > NC_014034/974214‑974379
|
cccAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCC.GGGG...GTGCg.g > 2:5365681/1‑101 (MQ=255)
cgggATCCGGCATGGCCGCTGCGCAGGGGCTTGTTTTCACCTTGCGACAAATACCCCGGGGGTCGGGGGGCGGAGCCCCCGGCGGGTCGCCTCGGCGACAg < 1:1807502/101‑1 (MQ=9)
cgcAGCGGCTTGTTTTCCCCGTGCGACAAATATCCCGGGGGTCCGGGGGCGGAGCCCCCGGCGGGTCGCCTCGGCGACAGCCGAGGCGAAATACCCcggcc < 2:3714322/101‑1 (MQ=2)
tCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCGGAGCCCCCGGCGGGGGGGCGCGGCGGCGGGCCAGGCGGAAAACCCCCGCCGCAGCGGcgcgggct > 2:1952969/1‑94 (MQ=0)
|
CCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCG.TGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCC.GGGGT..GTGCG.GAAGCCCCCGGCGGGTCGCCTCGGCGACAGCCGAGGCGAAATACCCCCGCCGCAACGGCCGGTTCT > NC_014034/974214‑974379
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 5 ≤
ATCG
< 18 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|