| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,734,889 | T→G | 1.8% | intergenic (‑142/+51) | RCAP_rcc01603 ← / ← RCAP_rcc01604 | hemolysin‑III family protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,734,889 | 0 | T→G | 1.8% | 3.8 ‑4.2 ‑0.1 | 273 | intergenic (‑142/+51) | RCAP_rcc01603/RCAP_rcc01604 | hemolysin‑III family protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (5/0): ref base (113/155): total (118/155) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.44e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.91e-01 | ||||||||||
Only 100 of 299 total aligned reads displayed.
CAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.TG.CCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGC > NC_014034/1734790‑1734989
|
aaGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.Tg < 1:3339634/101‑1 (MQ=255)
aaGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.Tg < 1:2015646/101‑1 (MQ=255)
ccAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.gg < 2:364974/101‑1 (MQ=255)
cAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGc > 2:3405316/1‑101 (MQ=255)
aaaGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGcc > 2:1737448/1‑101 (MQ=255)
aaGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCt < 1:2574411/101‑1 (MQ=255)
aaGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCt > 1:5047340/1‑101 (MQ=255)
aaGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGACt > 2:2599408/1‑101 (MQ=255)
aGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTTT.TGCAAGAAGAAACTTGC.GGctt > 2:1086292/1‑99 (MQ=17)
aGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCtt < 1:5298167/101‑1 (MQ=255)
aGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCtt > 2:4340228/1‑101 (MQ=255)
aGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCtt < 1:1029121/101‑1 (MQ=255)
cTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCAt > 1:1895732/1‑101 (MQ=255)
tGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATc < 2:842321/101‑1 (MQ=255)
gACGCTGCGTCAGCCGGCGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCt < 2:3953971/101‑1 (MQ=255)
gACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGACGCTTC.CCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCt < 1:4985542/101‑1 (MQ=18)
aCGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCtt < 2:1484211/101‑1 (MQ=255)
cTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGcc < 1:1138117/101‑1 (MQ=255)
tGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCa < 1:2084756/101‑1 (MQ=255)
tGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCa < 2:2663788/101‑1 (MQ=255)
gCGTCAGCCGACGGGCCGGGGAGGGGGGCGC.TGCCCCCCGTGCTGCGGGCTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCAt < 1:2320337/101‑1 (MQ=18)
cGTCAGCCGACGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATa < 1:5005390/101‑1 (MQ=255)
gTCAGCCGACGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATaa < 1:3124619/101‑1 (MQ=255)
gTCAGCCGACGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATaa < 1:3429563/101‑1 (MQ=255)
cAGCCGACGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAat > 2:5139625/1‑101 (MQ=255)
aGCCGACGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAata > 2:1002499/1‑101 (MQ=255)
aGCCGACGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAata < 2:2999486/101‑1 (MQ=255)
gCCGACGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAata.t < 2:4751284/101‑1 (MQ=255)
cgtcgggccgggcAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.Tcc < 2:3774836/98‑1 (MQ=255)
ccaccggccgggcAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.Tcc < 2:4636348/96‑1 (MQ=255)
gACGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.Tccc < 2:1754954/101‑1 (MQ=255)
aCGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.g < 2:4279709/101‑1 (MQ=255)
aCGGGCCGGGCAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.g < 1:3992487/101‑1 (MQ=255)
ggccgggcAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.gggg < 2:2081259/101‑1 (MQ=255)
tgacggacggggggCTC.TG.CCCCCCGGCTTCG..CTCCCCCCGGGATATTTGC.GGCAAGATGAAGG.GGCATGATTTCATCTTGCCCGAAATA.TCCCAGGGGTg > 1:2416509/9‑101 (MQ=2)
gccgggcAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGt < 2:2215207/101‑1 (MQ=255)
gccgggcAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCCGGGTCTTTAT.CGCAAGATGGAAC.CGC.GGGCCTCATCTTTCCCCAAAAATTCCC.gggg > 2:4890036/1‑101 (MQ=2)
gggcAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCg > 2:181206/1‑101 (MQ=255)
gggcAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCg < 1:2708885/101‑1 (MQ=255)
gggcAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCg > 1:912455/1‑101 (MQ=255)
gcAGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCggg < 1:1553536/101‑1 (MQ=255)
gaGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCgggg < 2:914900/100‑1 (MQ=255)
aGGGGGGCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGc > 2:4046816/1‑101 (MQ=255)
ggggggCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCa < 1:3563679/101‑1 (MQ=255)
ggggggCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCa < 1:3409499/101‑1 (MQ=255)
ggggggCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCa < 2:656116/101‑1 (MQ=255)
ggggCGC.TGCCCCCCGTCCTGCGGACTCCCCCCTGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCa.ga < 1:4961305/101‑1 (MQ=255)
ggggCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCa.ga < 2:453711/101‑1 (MQ=255)
ggggCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCa.ga < 1:440282/101‑1 (MQ=255)
gggCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCCTAAATA.TCCC.GGGGTGCGGGGCa.gag > 2:600081/1‑101 (MQ=255)
ggCGC.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGc < 1:1692893/101‑1 (MQ=255)
cgc.TGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGccc < 1:5619824/101‑1 (MQ=255)
gctgccccccGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGcccc < 2:1606945/96‑1 (MQ=255)
cccccGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCa < 1:1737547/101‑1 (MQ=255)
cccccGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCa > 2:4451061/1‑101 (MQ=255)
cccccGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCa > 2:4180449/1‑101 (MQ=255)
cccGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAAc < 1:1234628/101‑1 (MQ=255)
cccGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAAc > 2:2489224/1‑101 (MQ=255)
cGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCg < 2:2756824/101‑1 (MQ=255)
ccTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAg > 2:4995155/1‑101 (MQ=255)
cTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGa > 2:1540280/1‑101 (MQ=255)
tGCGGACTCCCCCCGGGGTATTTTTGGGCAAGTGGAAAT.TG..GGGCTTTATTTTTCCATAAATA.TTCC.GGGGGGGGGGGGAGGGGCCCCGTCCAACCGAAGa > 2:1998491/1‑101 (MQ=255)
tGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGAt > 1:729265/1‑101 (MQ=255)
ggACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGAc < 2:3418987/101‑1 (MQ=255)
gACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACa < 2:5757828/101‑1 (MQ=255)
gACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACa > 1:2865827/1‑101 (MQ=255)
cTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAg < 1:4593060/101‑1 (MQ=255)
tCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGa > 1:2245370/1‑101 (MQ=255)
tCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGa > 1:87933/1‑101 (MQ=255)
ccccccGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGAt < 2:3191575/101‑1 (MQ=255)
ccccccGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGAt < 1:2075027/101‑1 (MQ=255)
cccccGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGTA.GAGCCCCGCTCAACCGAAGATGACAAGATc < 1:5128256/101‑1 (MQ=255)
cGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCcgcg < 1:1373541/101‑1 (MQ=255)
ggATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGc > 1:245226/1‑101 (MQ=255)
ggATATTTAT.GGAAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGc < 1:5755939/101‑1 (MQ=255)
tatTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCg < 2:5344932/101‑1 (MQ=255)
tttAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGGA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGt > 2:2287700/1‑101 (MQ=255)
tttAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGt > 2:731538/1‑101 (MQ=255)
tttAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGt < 1:764445/101‑1 (MQ=255)
ttAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGtt > 1:3496040/1‑101 (MQ=255)
tAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGttt > 1:3045245/1‑101 (MQ=255)
aT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGtttt < 1:4047063/101‑1 (MQ=255)
aT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGtttt > 1:5385380/1‑101 (MQ=255)
t.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTc < 2:1318391/101‑1 (MQ=255)
ggCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCg < 1:2824175/101‑1 (MQ=255)
gCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGGGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGc > 1:2619957/1‑101 (MQ=255)
aaGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCtg > 2:1968597/1‑101 (MQ=255)
aGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCtga > 1:5481331/1‑101 (MQ=255)
gATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCtgat < 1:4774919/101‑1 (MQ=255)
tGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGCTTTCGCtgatga > 2:2569029/1‑101 (MQ=255)
gAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAg > 2:2825914/1‑101 (MQ=255)
gAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAg > 2:2446255/1‑101 (MQ=255)
gAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAg > 1:3815844/1‑101 (MQ=255)
aaaC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGc > 2:3279083/1‑101 (MQ=255)
aC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCaa < 2:549752/101‑1 (MQ=255)
aC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCaa < 2:3462305/101‑1 (MQ=255)
c.TGC.TGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAg > 1:2762125/1‑101 (MQ=255)
c.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAg < 1:2163036/101‑1 (MQ=255)
tGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCTGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAgc > 1:4536551/1‑101 (MQ=255)
tGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAgc < 2:4369905/101‑1 (MQ=255)
|
CAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGC.TG.CCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAAC.TGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGC > NC_014034/1734790‑1734989
Base quality scores:
ATCG
< 3 ≤
ATCG
< 22 ≤
ATCG
< 30 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|