| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,734,908 | T→G | 1.8% | intergenic (‑161/+32) | RCAP_rcc01603 ← / ← RCAP_rcc01604 | hemolysin‑III family protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,734,908 | 0 | T→G | 1.8% | 2.3 ‑3.7 ‑0.0 | 279 | intergenic (‑161/+32) | RCAP_rcc01603/RCAP_rcc01604 | hemolysin‑III family protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (5/0): ref base (129/145): total (134/145) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.46e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.98e-01 | ||||||||||
Only 100 of 296 total aligned reads displayed.
GCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTG.CCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGCAGGTCGTT > NC_014034/1734809‑1735008
|
gCGTCAGCCGACGGGCCGGGGAGGGGGGCGCTGCCCCCCGTGCTGCGGGCTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCAt < 1:2320337/101‑1 (MQ=18)
gCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCAt < 1:3999672/101‑1 (MQ=255)
gTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATaa < 1:2715708/101‑1 (MQ=255)
aGCCGACGGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAata < 2:2999486/101‑1 (MQ=255)
aGCCGACGGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAata > 1:2681179/1‑101 (MQ=255)
gCCGACGGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAata.t < 2:4751284/101‑1 (MQ=255)
cgtcgggccgggcAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.Tcc < 2:3774836/98‑1 (MQ=255)
ccaccggccgggcAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.Tcc < 2:4636348/96‑1 (MQ=255)
aCGGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.g < 1:1698104/101‑1 (MQ=255)
aCGGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.g < 2:4279709/101‑1 (MQ=255)
aCGGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.g < 2:3562984/101‑1 (MQ=255)
cgggccgggcAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.gg < 2:4502215/101‑1 (MQ=255)
agggccgggaAGGAGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATTTTGCCATAAATA.TCCC.gg < 2:2428561/100‑1 (MQ=14)
ggccgggcAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.gggg < 2:2081259/101‑1 (MQ=255)
tgacggacggggggCTCTG.CCCCCCGGCTTCG..CTCCCCCCGGGATATTTGC.GGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATA.TCCCAGGGGTg > 1:2416509/9‑101 (MQ=2)
gccgggcAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCCGGGTCTTTAT.CGCAAGATGGAACCGC.GGGCCTCATCTTTCCCCAAAAATTCCC.gggg > 2:4890036/1‑101 (MQ=2)
gccgggcAGGGGGGCGCTGCCCCCCGTCCTGAGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGt > 1:5125379/1‑101 (MQ=255)
acggacggggggCTCTG.CCCCCCGGCTTCG..CTCCCCCCGGGATATTTGC.GGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATA.TCCCAGGGGTgaa > 1:4564534/7‑99 (MQ=2)
acggacggggggCTCTG.CCCCCCGGCTTCG..CTCCCCCCGGGATATTTGC.GGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATA.TCCCAGGGGTgaa > 1:5474530/7‑99 (MQ=2)
gggcAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCg < 1:1220977/101‑1 (MQ=255)
gggcAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCg > 2:2736620/1‑101 (MQ=255)
ggggggCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCa < 1:3409499/101‑1 (MQ=255)
ggggCGCTGCCCCCCGTCCTGCGGACTCCCCCCTGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCa.ga < 1:4961305/101‑1 (MQ=255)
ggggCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCa.ga > 2:1373453/1‑101 (MQ=255)
ggggCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TACC.GCGCTGCGGGGCa.ga > 2:1750500/1‑101 (MQ=17)
cgcTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGccc < 1:5619824/101‑1 (MQ=255)
cgcTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGccc > 1:251495/1‑101 (MQ=255)
cgcTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGccc < 1:880461/101‑1 (MQ=255)
gctgccccccGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGcccc < 2:1606945/96‑1 (MQ=255)
gctgccccccGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGcccc > 2:2218998/6‑101 (MQ=255)
gccccccGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCt > 2:3365251/3‑101 (MQ=255)
gccccccGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCt < 1:2016460/99‑1 (MQ=255)
cccGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAAc > 2:2489224/1‑101 (MQ=255)
gTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGa < 2:5045883/101‑1 (MQ=255)
ccTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAg > 2:4995155/1‑101 (MQ=255)
cTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGa > 2:1540280/1‑101 (MQ=255)
cTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGa > 2:5783672/1‑101 (MQ=255)
tGCGGACTCCCCCCGGGGTATTTTTGGGCAAGTGGAAATTG..GGGCTTTATTTTTCCATAAATA.TTCC.GGGGGGGGGGGGAGGGGCCCCGTCCAACCGAAGa > 2:1998491/1‑101 (MQ=255)
gCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCGCCGCTCAACCGAACATg > 2:39702/1‑101 (MQ=255)
ggACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGAc < 2:3418987/101‑1 (MQ=255)
cTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAg > 2:1787649/1‑101 (MQ=255)
cTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAg < 1:3092644/101‑1 (MQ=255)
tCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCCTCTTGCCATAAATA.TCCC.GGGGCGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGa > 2:937120/1‑101 (MQ=255)
tCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGa < 1:2858282/101‑1 (MQ=255)
ccccccGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGAt > 2:2640890/1‑101 (MQ=255)
ccccccGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGAt > 1:1656342/1‑101 (MQ=255)
cccccGGGATATTTAT.GGCAAGATGAAACTGC.GTCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATc < 2:4402517/101‑1 (MQ=255)
cccccGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATc < 1:3803851/101‑1 (MQ=255)
cccccGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATc < 2:1176842/101‑1 (MQ=255)
ccccGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATcc < 2:1895623/101‑1 (MQ=255)
cccGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCcg < 2:518194/101‑1 (MQ=255)
cccGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCcg > 1:2811242/1‑101 (MQ=255)
ccGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCcgc > 1:740882/1‑101 (MQ=255)
cGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCcgcg < 1:1373541/101‑1 (MQ=255)
ggATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGc > 1:245226/1‑101 (MQ=255)
gATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGcc > 1:2154020/1‑101 (MQ=255)
tatTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCg < 2:5344932/101‑1 (MQ=255)
tatTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCg > 2:620266/1‑101 (MQ=255)
tatTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCg > 1:5006912/1‑101 (MQ=255)
atTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCgg > 2:907518/1‑101 (MQ=255)
atTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCgg > 1:5299994/1‑101 (MQ=255)
tttAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGGA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGt > 2:2287700/1‑101 (MQ=255)
tttAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGt > 2:689346/1‑101 (MQ=255)
tttAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGt > 2:731538/1‑101 (MQ=255)
tAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGttt > 2:4340472/1‑101 (MQ=255)
t.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTc > 1:3841626/1‑101 (MQ=255)
aaGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCtg > 2:4120407/1‑101 (MQ=255)
gATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCtgat > 1:351557/1‑101 (MQ=255)
gATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCtgat < 1:4774919/101‑1 (MQ=255)
aggAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCtgatg < 1:2081692/99‑1 (MQ=255)
gAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAg > 1:441181/1‑101 (MQ=255)
nnaNNNN.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAgn < 1:640111/99‑2 (MQ=255)
aaaCTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGc > 2:3279083/1‑101 (MQ=255)
aaCTGC.GGGCTTCACCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCa < 1:4995436/101‑1 (MQ=255)
aaCTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCa > 1:991513/1‑101 (MQ=255)
aCTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCaa < 2:549752/101‑1 (MQ=255)
aCTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCaa < 2:3462305/101‑1 (MQ=255)
cTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAg < 1:3451513/101‑1 (MQ=255)
aggcgggCCTTCTTCTTGCAATAAATA.GCGC.GGGGGGGGGGCCA.GAGCGCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCaa < 1:2936796/96‑1 (MQ=255)
gC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAgcg < 1:5494687/101‑1 (MQ=255)
c.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAgcgc > 1:3611790/1‑101 (MQ=255)
ggCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCGAGCGcc > 2:2814257/1‑101 (MQ=255)
ggCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGcc > 1:3198480/1‑101 (MQ=255)
ggCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGcc > 1:1742766/1‑101 (MQ=255)
ggCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGcc > 1:789696/1‑101 (MQ=255)
gCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGccc < 2:56868/101‑1 (MQ=255)
ccTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCg < 1:4076674/101‑1 (MQ=255)
ttCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGtt < 1:2599550/101‑1 (MQ=255)
ttCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGtt < 1:2219120/101‑1 (MQ=255)
cATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCg > 2:3663232/1‑101 (MQ=255)
aTCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCgg < 1:5711955/101‑1 (MQ=255)
aTCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCgg > 2:1042655/1‑101 (MQ=255)
cTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGCa < 2:3198291/101‑1 (MQ=255)
ttGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGCAg < 1:3421916/101‑1 (MQ=255)
ttGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGCAg > 1:4358960/1‑101 (MQ=255)
tGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGCAgg > 2:2579460/1‑101 (MQ=255)
gCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGCAGGt > 1:3223917/1‑101 (MQ=255)
gCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGCAGGt > 1:4697000/1‑101 (MQ=255)
ccATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGCAGGTc < 1:101033/101‑1 (MQ=255)
tAAAAA.GCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGCAGGTCGtt < 1:937196/101‑1 (MQ=255)
|
GCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTG.CCCCCGTCCTGCGGACTCCCCCCGGGATATTTAT.GGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATA.TCCC.GGGGTGCGGGGCA.GAGCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGCAGGTCGTT > NC_014034/1734809‑1735008
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|