| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,976,894 | C→G | 84.9% | intergenic (‑73/+7) | fba ← / ← gap1 | fructose‑bisphosphate aldolase/glyceraldehyde‑3‑phosphate dehydrogenase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,976,894 | 0 | C→G | 84.9% | 75.4 ‑0.2 0.0 | 199 | intergenic (‑73/+7) | fba/gap1 | fructose‑bisphosphate aldolase/glyceraldehyde‑3‑phosphate dehydrogenase |
| Reads supporting (aligned to +/- strand): new base (100/69): ref base (17/13): total (117/82) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.42e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 208 total aligned reads displayed.
CCGAAGGGTGATCAGTGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CGGCGTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCGGACCAT > NC_014034/1976801‑1976990
|
ccGAAGGGTGATCAGTGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTtct > 1:5085411/1‑101 (MQ=255)
cGAAGGGTGATCAGTGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTtctc > 2:220280/1‑101 (MQ=255)
gAAGGGTGATCGGTGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.GGCG.CCC.CCGGCTTTTCTCa < 2:2766988/101‑1 (MQ=25)
aaGGGTGATCAGTGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAg > 2:2644021/1‑101 (MQ=255)
aaGGGTGATCAGTGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAg > 2:3862154/1‑101 (MQ=255)
aGGGTGATCAGTGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGa > 1:2626941/1‑101 (MQ=255)
ggtggATCAGGCCCTTTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATCCCCGGGGGGTCG.GGGGGC.AGCC.CCC.CCGGCTTTTCTCAGAt < 2:3262193/97‑1 (MQ=255)
ggTGATCAGTGCCATTTTCTCAGTTCCTTGAGTTCGCGGCTTTTTTCTTGG.CCG.AAATACGCGGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATc < 2:5557753/101‑1 (MQ=37)
ggTGATCAGTGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATc > 1:105591/1‑101 (MQ=255)
gTGATCAGTGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCa > 2:499126/1‑101 (MQ=255)
tGATCAGTGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAg > 1:3756687/1‑101 (MQ=255)
tcggTGCCTTTTTCTCAGTTCCTTGAGTTCGGGGCCTTTTTCTTGG.CCG.AAATCCGCGGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCtt < 1:2710406/98‑1 (MQ=25)
tCAGTGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCtt > 1:4310832/1‑101 (MQ=255)
cAGTGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTg > 2:3926826/1‑101 (MQ=255)
atgcccATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGc < 2:3521790/97‑1 (MQ=25)
aGTGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGc > 2:3582587/1‑101 (MQ=255)
aGTGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGc > 2:843221/1‑101 (MQ=255)
gTGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGcc > 1:5645046/1‑101 (MQ=255)
tGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGccc < 2:795565/101‑1 (MQ=255)
tGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGccc < 2:3641383/101‑1 (MQ=255)
tGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGccc > 2:714883/1‑101 (MQ=255)
gCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCa > 2:4065975/1‑101 (MQ=255)
ccttttttCTAAGTTCTTTGGGTTCGCGGCTTTTTTCTGGG.CCA.AAATCCGCGGGGGGCCG.GGGGGC.AGCC.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCa < 2:160989/97‑1 (MQ=255)
cttttcCTCAGTCCGTGGAGTCCGCGGCTTTTTTCTGGG.CCG.AAATCCGCGGGGGGCCC.GGGGGC.AGCC.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATc < 1:3582804/99‑1 (MQ=255)
tttCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGcc > 1:2773647/1‑101 (MQ=255)
tttCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGcc > 2:1956175/1‑101 (MQ=255)
tctcAGTTCTTTGAGTCCGC.GCCTTTTTTTTGGCCCG.AAATCCGCGGGGGGCCG.GGGGGC.AGCC.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCAc < 2:2296288/101‑1 (MQ=255)
tcAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATTGCCaacg > 2:5313358/1‑98 (MQ=25)
tcAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCAcgg > 1:5325177/1‑101 (MQ=255)
cAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCAcggc > 1:4362577/1‑101 (MQ=255)
agatCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCAcagcg > 2:4745978/4‑101 (MQ=25)
aGTTCCTTGAGTTCGCGGCTTTTTTCTGGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCAcggcg < 2:3409705/101‑1 (MQ=37)
aGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCCGCGGC.TTTTCTCAGATCAGCTTGCCCATCGCCAcggcg > 1:4035139/1‑101 (MQ=255)
aGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCAcggcg > 1:3202076/1‑101 (MQ=255)
ttCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGt > 1:1877053/1‑101 (MQ=255)
ttCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGt > 2:5750223/1‑101 (MQ=255)
ttCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGt > 1:2291534/1‑101 (MQ=255)
ctggggtccgcgGCTTTTTTCTGGG.CCG.AAATCCGCGGGGGGTCG.GGGGGC.AGCC.CCC.CGGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATc < 2:2505448/93‑1 (MQ=21)
ttGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCg > 2:4524456/1‑101 (MQ=255)
ggggtCGGGGGCTTTTTTTGGG.CCGAAAATCCGCGGGGGGCCG.GGGGGCGGGCC.CCC.CGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCgg < 1:5698961/97‑1 (MQ=12)
gAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGc > 2:2343115/1‑101 (MQ=255)
ggTTCGCGCCGTTTTTCGGGC.CCA.AAATCCGCCGGGGGCCC.GGGGCC.GGCC.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGcc < 1:4330704/100‑1 (MQ=16)
ttCGCGGCTTTTTTTTTGG.CCA.AAAT.CCCCGGGGGTCCGGGGGGC.ACCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCAt < 1:837048/101‑1 (MQ=21)
cgcgGCCTTTTTTTGGG.CCA.AAATCGGCCGGGGGCCG.GGGGGC.GGCC.CCC.CGGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGc < 1:3700443/101‑1 (MQ=21)
cgcgGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGc > 1:615024/1‑101 (MQ=255)
ggCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGt > 1:2247127/1‑101 (MQ=255)
gcccTTTTTTTTGGCCCA.AAACCCCCCGGGGGCCC.GGGGCC.CCCC.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCgg < 1:2388139/99‑1 (MQ=12)
gCCTTTTTCTTGG.CCG.AAATCCGCGGGGGGTCG.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGtt < 2:3351272/101‑1 (MQ=25)
gcTTTTTCCTGGCCCG.AACTCCGCGGGGGGTCG.GGGGCC.ACCG.CCC.CCGCCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGtt < 2:3320687/100‑1 (MQ=18)
cttttttGTTGG.CCG.AATTCCGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTc < 1:2874942/99‑1 (MQ=25)
ccTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTc < 2:5394031/101‑1 (MQ=255)
cTTTTTCTTGC.CCG.AAATCCGCCGGGGGCCG.GGGGGC.GGCC.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCg < 2:2412038/101‑1 (MQ=21)
ttttCTTGG.CCG.AAATCCGCGGGGGTTCC.GGGGGC.AGCC.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCgag < 2:3559130/101‑1 (MQ=25)
ttttCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCgag > 2:1200464/1‑101 (MQ=255)
ttttCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCgag > 2:5628387/1‑101 (MQ=255)
ttCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGaa > 1:339261/1‑101 (MQ=255)
ttCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGaa > 1:4422036/1‑101 (MQ=255)
tccgatctcG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGaa < 2:2831816/93‑1 (MQ=25)
cTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCGATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGc > 1:4940999/1‑101 (MQ=25)
ttGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.CGCG.CCC.CCAGCTTTTCTCAGATCAGCGTGCCCATAGCCACGGCGGTATCGGACATGCGGTTCACGAAGcc > 2:1905242/1‑101 (MQ=25)
gg.CCG.AAATGCGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGcccc < 2:1937317/101‑1 (MQ=25)
gg.CCG.AAATACGCGGGGGGTCC.GGGGCC.GGCC.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGcccc < 1:1607430/101‑1 (MQ=21)
cG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCcatt > 2:5667470/1‑101 (MQ=255)
g.AAATCCGCGGGGGGCCG.GGGGGC.GGCG.CCCACGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCcattc < 1:972307/101‑1 (MQ=17)
aaTACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCcattcat > 1:3329005/1‑101 (MQ=255)
aCGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGt > 2:515841/1‑101 (MQ=255)
cGCGGGGGGTCC.GGGGGC.CGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTc < 1:5440673/101‑1 (MQ=21)
cGCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTc > 1:2813795/1‑101 (MQ=255)
gCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTct > 1:1149806/1‑100 (MQ=255)
gCCGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCa > 2:4450013/1‑101 (MQ=255)
cggggggTCC.GGGGGC.AGCC.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCAt < 1:5592929/99‑1 (MQ=21)
cggggggCCG.GGGGGC.AGCC.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCAt < 1:4831822/99‑1 (MQ=18)
cGGGGGTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATa > 1:5107707/1‑101 (MQ=255)
gggggTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATAc > 1:4681317/1‑101 (MQ=255)
gggTCC.GGGGGC.AGCC.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCa < 1:1647747/101‑1 (MQ=18)
gTCG.GGGGGC.AGCC.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACg < 1:2565520/101‑1 (MQ=18)
gTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACg > 2:2087508/1‑101 (MQ=255)
gTCC.GGGGGC.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACg > 2:4369655/1‑101 (MQ=255)
gggggC.AGCGCCCC.CGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAg > 2:1664764/1‑101 (MQ=255)
gggggC.AGCGCCCC.CGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCAAGACAg > 2:2280511/1‑101 (MQ=18)
ggggC.AGCGCCCC.CGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAgg > 1:3518906/1‑101 (MQ=255)
ggggC.AGCGCCCC.CGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAgg > 1:4908420/1‑101 (MQ=255)
ggggC.AGCGCCCC.CGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAgg > 2:2951172/1‑101 (MQ=255)
nnnnnnnnnnccc.cGGC.NTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAgg < 2:1515017/91‑1 (MQ=18)
ggcccccccccc.cGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGa < 1:2990627/92‑1 (MQ=18)
gggggcccccc.cGGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGa < 2:3092824/93‑1 (MQ=18)
gcccccccccc.cGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGAt < 1:5735868/93‑1 (MQ=18)
c.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGc > 2:4478777/1‑101 (MQ=255)
c.AGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGc > 1:670341/1‑101 (MQ=255)
cagcccccc.cGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGc < 2:3754392/95‑1 (MQ=255)
aGCG.CCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCg < 2:4674479/101‑1 (MQ=255)
gcg.cCC.CCGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCgg > 1:5011320/1‑101 (MQ=255)
gcccccc.cGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCgg < 1:4524728/97‑1 (MQ=255)
gcccc.cGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCGGAc > 1:776693/3‑101 (MQ=255)
gcccc.cGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCGGAc > 1:1763958/3‑101 (MQ=255)
cccc.cGGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCGGAc < 1:1200545/100‑1 (MQ=255)
cccc.cGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCGGAcc < 2:3201887/100‑1 (MQ=255)
cccc.cGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCGGAcc < 2:776553/100‑1 (MQ=255)
ccc.cGGGCTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCGGAcc < 2:4618566/101‑1 (MQ=255)
ccc.cGGC.TTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCGGACCa < 1:2097514/101‑1 (MQ=255)
|
CCGAAGGGTGATCAGTGCCATTTTCTCAGTTCCTTGAGTTCGCGGCCTTTTTCTTGG.CCG.AAATACGCCGGGGGTCC.GGGGGC.AGCG.CCC.CGGCGTTTTCTCAGATCAGCTTGCCCATCGCCACGGCGGTATCGGCCATGCGGTTCGAGAAGCCCCATTCATTGTCATACCACGACAGGATGCGGACCAT > NC_014034/1976801‑1976990
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 27 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|