Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 3,178,410 | T→C | 3.1% | intergenic (+149/+98) | RCAP_rcc02987 → / ← RCAP_rcc02988 | OmpA/MotB domain‑containing protein/hypothetical protein |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 3,178,410 | 0 | T→C | 3.1% | 3.6 ‑2.1 ‑0.0 | 189 | intergenic (+149/+98) | RCAP_rcc02987/RCAP_rcc02988 | OmpA/MotB domain‑containing protein/hypothetical protein |
Reads supporting (aligned to +/- strand): new base (3/3): ref base (38/144): total (41/148) | ||||||||||
Fisher's exact test strand distribution p-value = 1.19e-01 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.42e-01 |
Only 100 of 230 total aligned reads displayed.
CGCGCGGCATTGGCCCCATGCCAGCCGGGGGCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGCCCGAAACCGTCGCTC > NC_014034/3178313‑3178509
|
cgcgcgGCATTGGCCCCATGCCAGCCGGGGGCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCgg < 1:2370314/101‑1 (MQ=255)
ggggCTTTGGCCCCGGGCCGGCCGGGGGCCCAAGGGCCGCCGGCCGGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCt < 1:1208742/99‑1 (MQ=17)
gcgGCATTGGCCCCATGCCAGCCGGGGGCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCt < 1:3078270/101‑1 (MQ=255)
gcgGCATTGGCCCCATGCCAGCCGGGGGCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCt < 1:391047/101‑1 (MQ=255)
gcgGCATTGGCCCCATGCCAGCCGGGGGCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCt < 1:5635601/101‑1 (MQ=255)
gcgGCATTGCCCCCATGCCAGCCGGGGGCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCt < 2:110364/101‑1 (MQ=255)
gCACTGGCCCCATGCCCGCCGGGGGCCCAAAGGCCGCCGGCCAGCCCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCtgtg < 2:1750762/101‑1 (MQ=255)
cATGGGCCCCATGCCAGCCGGGGGCCCAAAGGCCCCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTgtgt < 1:867812/101‑1 (MQ=255)
aTTGGCCCCATGCCAGCCGGGGGCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTc < 1:5657321/101‑1 (MQ=255)
aTTGGCCCCATGCCAGCCGGGGCCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTc < 2:965421/101‑1 (MQ=255)
aTTGGCCCCATCCCAGCCGGGGGCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTc < 2:5503247/101‑1 (MQ=255)
aTTGCCCCCATGCCAGCCGGGGGCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTc < 1:2877713/101‑1 (MQ=255)
tgcccacggcccAGCGGGGGGCCGAAGGGCCGCCGGCAGGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTcgc < 2:2451573/91‑1 (MQ=14)
ccctgcccAGCCGGGGGCCCAAGGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCtt < 2:4686520/95‑1 (MQ=255)
cccATGCCAGCCGGGGGCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCtt < 2:3368475/101‑1 (MQ=255)
ccATGCCAGCCGGGGGCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTg < 1:165509/101‑1 (MQ=255)
cagcgcatccGGGGCGCAAAAGGCCCCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTgg < 1:63915/93‑1 (MQ=11)
aTGCCAGCCGGGGGCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.CTCTCCCCCGCCCGGCCCGGCGGCGGCCCGGGGCgcgccttcg > 2:2518086/1‑96 (MQ=14)
gcacAGCGGGGCCCCCGAAGCCCGCGGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCTGGCGTCGGCCTGTGTCGCGCTTgggg < 2:3654395/98‑1 (MQ=17)
gCCAGCGGGGGGCCCAAGGGCCCCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGa < 1:1127960/101‑1 (MQ=255)
cAGCCGGGGGCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.CTCTCGCCCCCCGGGGCGGGCGGCGGCCCGGGGCGCGCGTGGGGgaa > 1:398828/1‑101 (MQ=14)
aGCGGGGGGCCGAAAGGCCGCCGGCCAGCCCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAAc < 2:2473098/101‑1 (MQ=255)
aGCGGGGGGCCCAAAGGCCGCCGGCCGGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAAc < 2:2911271/101‑1 (MQ=255)
gCCGGGGGCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACg < 1:472581/101‑1 (MQ=255)
gggggCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTc < 2:3667984/101‑1 (MQ=255)
ggggCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGGGC.GTCTCGCCCCCCCGGCCCGGGGGCGGCCCGTGTGGCGCGTCGGGGGACGGGCt > 2:2730264/1‑101 (MQ=2)
gggcCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCt < 2:3074044/101‑1 (MQ=255)
gggCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGGGC.GTCTCGCCCCCCCGGCCGGGCGCCGGGCCGCGGCGCGGTGgggggggcggcgtt > 1:2641525/1‑91 (MQ=2)
ggCCCAAGGGCCCCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTg < 1:771416/101‑1 (MQ=255)
ggCCCAAGGCCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTg < 2:2092669/101‑1 (MQ=255)
ggCCCAAAGGCCCCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCCCCGGGCCGGGCGGCGGGCCCTGTCACCCTTGGGGGACCgggcgcg > 2:1615476/1‑96 (MQ=11)
gCCCAAGGGCCGCCGCCCAGCCCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGc < 2:1051421/101‑1 (MQ=255)
cccgagggCCGCGGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGACGGGCGCTGGCCTCTGTTGTGCTTGGGGAGGCGGTCTTGcg < 1:394273/95‑2 (MQ=17)
cccCAAGGCCCCCGGCCCGGCCCCGGCCCCCCCCTGGGGGGGCG.TTCTCCCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGcc < 1:4478556/101‑1 (MQ=12)
cccAAGGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGcc < 1:2459820/101‑1 (MQ=255)
gcccccGGCCGCCGCCCGCCCCGCCCGTGGCGGGCGC.TTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTgtcgcaaccg < 2:905999/101‑10 (MQ=17)
cgtgcgcccggcgcCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCt < 2:4878715/91‑1 (MQ=255)
ccgccgGCCAGCGCCCGCCCCGCCCATGGCGGGGGC.GTCTCCCCCCCCCGGCCGGGCGGCGGCCTGTGTGGCGCTTGGGGGGAAGGGCTTGCCCCCGGccc > 2:215830/1‑100 (MQ=9)
cccgggCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCtt < 1:2157505/97‑1 (MQ=255)
cgGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGca < 1:2575443/101‑1 (MQ=255)
cgGCCAGCCCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGca < 1:2520464/101‑1 (MQ=255)
gCCGGCCCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGcaca < 1:2010362/101‑1 (MQ=255)
gCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGcaca < 1:3163281/101‑1 (MQ=255)
gcgcCCGCCCCGCCCATGGCGGGCGCATTCGCGCCGCCGGGGGGGGGCGCAGGCCTCCCCCGCGCTTGGGGGGGGGATCTTGTCACCGGCCTTgggcggcc > 1:1511485/1‑94 (MQ=18)
gcgcCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAggcg < 2:3164891/101‑1 (MQ=255)
gcccgcccCGCCCATGGCGGGGGG.TTCTTTCCCCCCCGGCCCGGGGGGGGCCCCGGTCGCGCCTGGGGGGACGGGCTTGGCACGGGGCCCGCCCAcgcggg > 2:1721113/1‑101 (MQ=2)
gcccgcccCGCCCATGGCGGGCGCATTCGCGCCGCCGGGGCGGGGCGCAGGCCTCCCGCGCGCTTGGGGAGGCGATCTTGTCACCGGCTTTggtgcggcgg > 2:1819880/1‑92 (MQ=18)
gcccgcccCGCCCATGGCGGGCGCATTCGCGCCGCCCGGGGGGGGCGCAGGCCTCCCGCGCGCTTGGGGAGGGGATCTTGTCACCGGCTTTggtgcggccg > 2:2378991/1‑92 (MQ=18)
ccgccccgccCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAggcgggcg < 1:2849015/101‑1 (MQ=255)
cccgcccATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGaa < 1:4134280/101‑1 (MQ=255)
cccgcccATGGCGGGCGC.TTCTCGCCCGCCGGACCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGaa < 2:4540784/101‑1 (MQ=255)
ccgcccATGGCGGGGGC.TTCTCGCCCGCCCGGCCGGGGGGCGGCCTGTGTCGCGCTTGGGGGAACGGGGTTGCCACCGGCCCTGGACAGGcgggggggggg > 2:4597618/1‑98 (MQ=255)
ccgcccATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGaaa < 1:930647/101‑1 (MQ=255)
cgcccATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAAc < 2:4042254/101‑1 (MQ=255)
cgcccATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAAc < 1:5307620/101‑1 (MQ=255)
cccATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAAcgc < 2:4745805/101‑1 (MQ=255)
cATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCgg < 1:3675664/101‑1 (MQ=255)
cATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCgg < 1:3408067/101‑1 (MQ=255)
tGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGAt < 1:355129/101‑1 (MQ=255)
ggcgggcgC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATc < 1:1398615/101‑1 (MQ=255)
gcgggcgC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATc.g < 2:4384930/101‑1 (MQ=255)
gcgggcgC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATc.g < 1:4778061/101‑1 (MQ=255)
cgggcgC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGGGGGgaaaacggggcgc > 2:3751364/1‑91 (MQ=21)
gcgc.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGGAAAGCgggcaccggt > 2:612814/1‑93 (MQ=21)
cgc.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.Gttt < 1:3833037/101‑1 (MQ=255)
gc.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGGGGGGAAAGCGGCGC.G.C.GGTTc > 2:5191611/1‑101 (MQ=25)
gc.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGGAAAGCCGATC.G.C.GGTTc > 2:1517195/1‑101 (MQ=25)
c.TTCTCGCCCGGCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTcc < 2:2615400/101‑1 (MQ=255)
ttCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGGGGGGAAACCGGGTC.G.G.GCTTCCt > 1:4649991/1‑101 (MQ=25)
ttCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCt < 1:3317679/101‑1 (MQ=255)
ttCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCt < 2:29760/101‑1 (MQ=255)
tctcGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGGGGGGAAAGCGGGTC.G.C.Gttttcct > 2:5746366/1‑97 (MQ=25)
tctcGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCtt < 2:4313947/101‑1 (MQ=255)
tctcGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCtt < 2:1726859/101‑1 (MQ=255)
ctcGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGGGGGGAAAGCGGGTC.G.C.GGTTTCttt > 2:5648596/1‑101 (MQ=37)
cgcccgccGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGGGGGGAAAGGGGGTC.G.G.GGTTTCttttt > 1:1676291/1‑100 (MQ=21)
gcccgccGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGGGGGGGAAGCGGGGCGG.C.GTTTCTTTTTc > 1:1684443/1‑101 (MQ=25)
gcccgccGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCg < 2:1685969/101‑1 (MQ=255)
cccgccGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGc < 2:5319087/101‑1 (MQ=255)
ccgccgGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGGGGGGAAAGCGGATC.G.C.GGTTCCttttttcc > 1:535187/1‑97 (MQ=37)
cgccgGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGGGGGGAACGCGGAGT.G.G.GGTTTCTTTTTGccc > 2:5286150/1‑101 (MQ=37)
cgccgGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGccc < 1:2332229/101‑1 (MQ=255)
cgccgGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGccc < 1:996202/101‑1 (MQ=255)
cgccgGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGccc < 1:3721165/101‑1 (MQ=255)
ccgggccgggCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGGGGGGAACGGGGGGC.G.G.GGTTTCttttttccccc > 1:2098379/1‑94 (MQ=25)
ccgggccgggCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGCCCGa < 2:3272533/101‑1 (MQ=255)
cgggccgggcGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGGGAAGCGGGAC.G.CGGTTTCCtttttcccgca > 2:5032116/1‑94 (MQ=25)
gggccgggcGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGGAACGCGGGTC.G.C.GGTTCCTTTTTGccccgaa > 2:769422/1‑97 (MQ=38)
gggccgggcGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGCCCGaaa < 2:3909617/101‑1 (MQ=255)
gggccgggcGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGCCCGaaa < 2:938460/101‑1 (MQ=255)
gccgggcGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGCCCGAAAcc < 2:3421305/101‑1 (MQ=255)
ccgggcGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGGCGGGAACGCCGAGG.G.C.GGGTTCTTTTAGCCCGAAAcaa > 2:4147801/1‑99 (MQ=25)
cgggcGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGGAACGCGGGAC.G.C.GGTTTCTTTTTTCCCCGAACCgg > 2:4061141/1‑100 (MQ=25)
gggcGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGCCCGAAACCGTc < 2:5346825/101‑1 (MQ=255)
ggcGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGCCCGAAACCGTCg < 2:1401412/101‑1 (MQ=255)
gcGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGCCCGAAACCGTCGc < 2:5269157/101‑1 (MQ=255)
cGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGGAAAGCGGATC.G.C.GTTTTCTTTTCTCCCCAAACCCTCGcc > 1:572179/1‑100 (MQ=37)
cGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGCCCGAAACCGTCGCt < 2:4648943/101‑1 (MQ=255)
gTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGGAAAGCGGGGC.GCC.GTTTCCTTTTGCCCCAAAAccccgctc > 2:72595/1‑95 (MQ=25)
tCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAGAAGCGGGGC.G.CGGTTTCTTTTTCCCCCCAAAccccccccc > 1:3066902/1‑94 (MQ=25)
|
CGCGCGGCATTGGCCCCATGCCAGCCGGGGGCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCGCTTGGGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGCCCGAAACCGTCGCTC > NC_014034/3178313‑3178509
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|