Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 900,796 C→G 100% intergenic (‑125/‑162) ldh ← / → ftsW L‑lactate dehydrogenase/cell division protein FtsW

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_014034900,7960C→G100.0% 150.3 65intergenic (‑125/‑162)ldh/ftsWL‑lactate dehydrogenase/cell division protein FtsW
Reads supporting (aligned to +/- strand):  new base (51/14):  ref base (0/0):  total (51/14)

CAACCCCGTTTCCG.CGCGG.CGCCGCTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GC...CGCGGA..G.....CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAG  >  NC_014034/900724‑900875
                                                                                    |                                                                                      
cAACCCCGTTTCCGCCGCGGCCGCCGCTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGcccc                                                            >  1:94253/1‑101 (MQ=16)
 aaCCCCGTTTCCGCCGCGGCCGCCGCTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCg                                                           >  2:3229056/1‑101 (MQ=16)
  aCCCCGTTTCCGCCGCGGCCGCCGCTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCgg                                                          >  2:55171/1‑101 (MQ=16)
  aCCCCGTTTCCGCCGCGGCCGCCGCTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCgg                                                          >  1:5214695/1‑101 (MQ=16)
   ccccGTTTCCGCCGCGGCCGCCGCTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGc                                                         >  1:4023335/1‑101 (MQ=16)
   ccccGTTCCCGCCGCGGCCGCCGCTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGc                                                         <  2:5390899/101‑1 (MQ=12)
     cctttcccgccgcgGCCGCCTCTTGGCCGCAGCCCCGGTTTTCCTTGGTGCAAATCC.GCCG...GGGGGTGGGGG...GGCGGA..GCC...CCCGCGGGTCGCCCCGGccc                                                       <  2:3286248/91‑1 (MQ=2)
     ccGTTTCCGCCGCGGCCGCCGCTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGccc                                                       >  1:388452/1‑101 (MQ=16)
      cgttccggccgcgGCCGCCGCTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCt                                                      <  2:5792561/92‑1 (MQ=12)
       gTTTCCGCCGCGGCCGCCGCTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTg                                                     >  2:1182790/1‑101 (MQ=16)
       gTTTCCGCCGCGGCCGCCGCTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTg                                                     >  1:2986400/1‑101 (MQ=16)
         ttCCGCCGCGGCCGCCGCTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGcc                                                   >  2:1641585/1‑101 (MQ=16)
           ccgccgcgGCCGCCGCTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCgg                                                 >  2:2911644/5‑101 (MQ=18)
            cgccgcgGCCGCCGCTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCggg                                                >  2:1494438/4‑101 (MQ=18)
            cgccgcgGCCGCCGCTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCggg                                                >  2:495586/4‑101 (MQ=18)
             gccgcgGCCGCCGCTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATCC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCgggg                                               <  1:2629547/99‑1 (MQ=16)
              ccgcgGCCGCCGCTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGc                                              >  1:3826685/2‑101 (MQ=18)
              ccgcgGCCGCCGCTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGc                                              >  2:4168776/2‑101 (MQ=18)
                  ggccgcgccTTTCCCGCAGCCCCGGTTTTCCTTGGTGCAAATCC.GCCG...GGGGGTGGGGG...GGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGaaa                                          <  1:2713222/93‑1 (MQ=9)
                  ggccgcctcTTCGCCGCAGCCCCGGTTTCCCTTGGTG.AAATGCGGCCG...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGaaa                                          <  1:3212459/98‑1 (MQ=2)
                  ggccgccgcTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATCC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGaaa                                          <  2:3596885/98‑1 (MQ=18)
                  ggccgccgcTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGaaa                                          <  1:803891/98‑1 (MQ=18)
                   gccgccgcTTGGCCGCAGCCCCNGTTNNNCNTGGTGCAAATAC.GCCCGGGGGGGGG...GG...GGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAg                                         <  1:3229256/99‑1 (MQ=12)
                      gcctcTTGGCCGCAGCCCGGGTTTTCCTTGGGCCAAATCC.GCCG...GGGGGT...GC...GGGGGC..GGCCCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGccc                                      <  2:4380333/101‑1 (MQ=2)
                      gccgcTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGgcc                                      >  2:3836517/1‑101 (MQ=18)
                       ccgcTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGcccc                                     >  2:3505171/1‑101 (MQ=21)
                        cgcTGTGGCGCAGCCCCGGTTTTCCTGGGTGCAAATGC.GCCC...GGGGGTGGGGG...GGCGGG..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGccccc                                    <  2:3718672/101‑1 (MQ=12)
                         gcTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCcg                                   >  1:2636607/1‑101 (MQ=18)
                         gcTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCCGCCCTGCCGGGGCGAAAGCCCCcg                                   >  2:3433540/1‑101 (MQ=18)
                          cTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCcgc                                  >  2:2923777/1‑101 (MQ=18)
                          cTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCcgc                                  >  1:739470/1‑101 (MQ=18)
                          cTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCcgc                                  >  1:1838899/1‑101 (MQ=18)
                           tttGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCcgcg                                 >  2:3445841/1‑101 (MQ=18)
                              gCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCgcgcgc                              >  1:2393452/1‑101 (MQ=18)
                              gCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCgcgcgc                              >  1:2901180/1‑101 (MQ=18)
                               ccGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGcgcc                             >  1:3498262/1‑101 (MQ=18)
                                cGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGcgccg                            <  2:5553473/101‑1 (MQ=18)
                                cGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGGCGGCCCGGCCCTGCCGGGGTGAAAGCCCCCGCGcgccg                            >  1:1150346/1‑101 (MQ=18)
                                 gCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGcgccgc                           >  1:2321305/1‑101 (MQ=18)
                                 gCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGC...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGcgccgc                           >  1:5641172/1‑101 (MQ=18)
                                  cAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCcgcg                          >  2:4114933/1‑101 (MQ=18)
                                  cAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCcgcg                          >  1:2347478/1‑101 (MQ=18)
                                  cAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCcgcg                          >  2:3726079/1‑101 (MQ=18)
                                  cAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCcgcg                          >  2:748226/1‑101 (MQ=18)
                                  cAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCcgcg                          <  2:2303378/101‑1 (MQ=18)
                                      cccGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGccc                      <  2:2523380/101‑1 (MQ=18)
                                      cccGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGCCGCCCCGGCCCTGCCGGGCCGAAAGCCCCCGCGCGCCGCGGccc                      >  1:707089/1‑101 (MQ=18)
                                       ccGGTTTTCCTGGGTGCAAATCC.GCCC...GGGGGTGGGGG...GGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCg                     <  1:4779651/101‑1 (MQ=17)
                                          gTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCa                  >  1:4665722/1‑101 (MQ=18)
                                          gTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCa                  >  1:880238/1‑101 (MQ=18)
                                           ttttCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCaa                 >  1:1434348/1‑101 (MQ=18)
                                             ttCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCaaaa               >  2:5112403/1‑101 (MQ=18)
                                              tCCTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAg              >  1:2320623/1‑101 (MQ=18)
                                               ccTTGGTGCAAATCC.GCCC...GGGGGT...GCGGGGGCGGACCC.....CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGc             <  2:739402/101‑1 (MQ=18)
                                               ccTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGc             >  1:2422126/1‑101 (MQ=18)
                                                cTTGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGct            >  1:2739236/1‑101 (MQ=18)
                                                  tGGTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGCCGCCCCGGCCCTGCCGGGGCCAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGctct          >  2:2679156/1‑101 (MQ=18)
                                                   ggTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTg         >  1:3872166/1‑101 (MQ=18)
                                                    gTGCAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTgg        >  1:2173718/1‑101 (MQ=18)
                                                       cAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGTCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCa     >  2:3086343/1‑101 (MQ=18)
                                                       cAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCa     >  1:226993/1‑101 (MQ=18)
                                                       cAAATAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCa     >  1:4120059/1‑101 (MQ=18)
                                                        aaaTAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCag    >  2:1528748/1‑101 (MQ=18)
                                                        aaaTAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGACGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCag    >  1:770264/1‑101 (MQ=18)
                                                          aTAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCagag  >  1:1314039/1‑101 (MQ=18)
                                                          aTAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCagag  >  1:2423900/1‑101 (MQ=18)
                                                          aTAC.GCCC...GGGGGT...GCGGGGGCGGA..GCC...CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCagag  >  2:1333455/1‑101 (MQ=18)
                                                                                    |                                                                                      
CAACCCCGTTTCCG.CGCGG.CGCCGCTTTGCCGCAGCCCCGGTTTTCCTTGGTGCAAATAC.GCCC...GGGGGT...GC...CGCGGA..G.....CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAG  >  NC_014034/900724‑900875

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 22 ≤  ATCG  < 31 ≤  ATCG  < 39 ≤  ATCG