Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 2,040,373 Δ1 bp 95.6% intergenic (‑121/‑267) RCAP_rcc01888 ← / → RCAP_rcc01889 hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140342,040,3730C→.95.6% 18.5 ‑0.3 ‑0.7203intergenic (‑121/‑267)RCAP_rcc01888/RCAP_rcc01889hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  new base (111/83):  ref base (4/4):  total (116/87)
Fisher's exact test strand distribution p-value = 7.28e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.78e-01

Only 100 of 220 total aligned reads displayed.

GGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGTGGGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGG.C.GCGCCATAAGTGAGCCCACCCGGTTCGGAGGGTTGGATGCA  >  NC_014034/2040272‑2040470
                                                                                                     |                                                                                                   
ggCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCAc                                                                                                     >  1:1525053/1‑101 (MQ=255)
 gCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCAcc                                                                                                    <  1:2880939/101‑1 (MQ=255)
 gCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCAcc                                                                                                    <  2:1307784/101‑1 (MQ=255)
  cACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCAccg                                                                                                   <  2:3310816/101‑2 (MQ=255)
  cACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCAccg                                                                                                   >  1:1160502/1‑100 (MQ=255)
   aCCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCAccgg                                                                                                  <  2:4159742/101‑3 (MQ=255)
   aCCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCAccgg                                                                                                  >  1:3871833/1‑99 (MQ=255)
    ccGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCGgg                                                                                                 >  2:3098325/1‑101 (MQ=255)
      ggCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCGgggc                                                                                               <  2:2143900/101‑2 (MQ=255)
      ggCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCGgggc                                                                                               >  2:2370657/1‑100 (MQ=255)
          tctGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGAt                                                                                          >  1:3185589/1‑101 (MQ=255)
          tctGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGAt                                                                                          >  2:3593029/1‑101 (MQ=255)
           ctGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATg                                                                                         >  1:2730955/1‑101 (MQ=255)
            tGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATgg                                                                                        >  2:2573552/1‑101 (MQ=255)
             gggTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGc                                                                                       >  2:2679762/1‑101 (MQ=255)
             gggTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGc                                                                                       >  2:2203889/1‑101 (MQ=255)
               gTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCtt                                                                                     <  2:362720/101‑1 (MQ=255)
                ttGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTa                                                                                    >  1:3336400/1‑101 (MQ=255)
                ttGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTa                                                                                    >  2:2011448/1‑101 (MQ=255)
                 tGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAc                                                                                   >  2:1343697/1‑101 (MQ=255)
                 tGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAc                                                                                   <  1:4065282/101‑1 (MQ=255)
                  gggATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAcg                                                                                  >  1:201966/1‑101 (MQ=255)
                    gATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAcgcg                                                                                >  1:1723516/1‑101 (MQ=255)
                      tGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGt                                                                              >  2:2951366/1‑101 (MQ=255)
                      tGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGt                                                                              <  1:290313/101‑1 (MQ=255)
                       ggAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTa                                                                             <  1:1101848/101‑1 (MQ=255)
                       ggAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTa                                                                             <  1:1297265/101‑1 (MQ=255)
                       ggAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGGTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTa                                                                             >  2:725179/1‑101 (MQ=255)
                        gAAAAAGACCGGAACGGCCAGGGGCGAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTAt                                                                            <  1:4038145/101‑1 (MQ=255)
                        gAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTAt                                                                            <  2:3916029/101‑1 (MQ=255)
                          aaaaGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATGCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATgg                                                                          <  2:1007216/101‑1 (MQ=255)
                          aaaaGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATgg                                                                          >  1:675003/1‑101 (MQ=255)
                          aaaaGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATgg                                                                          <  2:231587/101‑1 (MQ=255)
                             aGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGgcgc                                                                       >  1:1633399/1‑101 (MQ=255)
                               aCCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGcgcgg                                                                     >  2:3879143/1‑100 (MQ=255)
                               aCCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGcgcgg                                                                     >  2:1008186/1‑100 (MQ=255)
                               aCCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGt                                                                     >  2:3982164/1‑101 (MQ=255)
                               aCCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGt                                                                     >  2:595977/1‑101 (MQ=255)
                                ccGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTg                                                                    >  1:2809726/1‑101 (MQ=255)
                                  ggAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGcc                                                                  >  2:2481906/1‑101 (MQ=255)
                                    aaCGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCaa                                                                >  2:3562089/1‑101 (MQ=255)
                                    aaCGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCaa                                                                <  1:133563/101‑1 (MQ=255)
                                      cGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAg                                                              <  1:554734/101‑1 (MQ=255)
                                       ggCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGa                                                             >  1:716890/1‑101 (MQ=255)
                                          cAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcgg                                                          >  2:1934218/1‑101 (MQ=255)
                                          cAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcgg                                                          <  2:2759108/101‑1 (MQ=255)
                                           aGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcggc                                                         >  1:911024/1‑101 (MQ=255)
                                             gggCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcggcgg                                                       >  1:942752/1‑101 (MQ=255)
                                                 cAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGc                                                   >  1:354269/1‑101 (MQ=255)
                                                   gACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCaa                                                 >  1:1326166/1‑101 (MQ=255)
                                                    aCGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCaaa                                                >  1:4233687/1‑101 (MQ=255)
                                                     cGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAg                                               >  2:543469/1‑101 (MQ=255)
                                                      gCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAgg                                              >  1:3650769/1‑101 (MQ=255)
                                                       cAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGg.c                                            <  2:3455238/101‑1 (MQ=255)
                                                        aGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGTATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGAGGCCGCAAAGg.cc                                           >  1:3453280/1‑100 (MQ=255)
                                                        aGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGg.cc                                           >  2:2173822/1‑100 (MQ=255)
                                                            cgtgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGg.ccgcg                                        >  2:3029638/4‑97 (MQ=255)
                                                              tgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGGGGCCGCAAAGGCC.GCGcc                                      >  1:3850893/2‑101 (MQ=255)
                                                               gggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGCTGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCa                                     >  1:418527/1‑101 (MQ=255)
                                                               gggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCa                                     <  2:1104189/101‑1 (MQ=255)
                                                                 gggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATa                                   <  1:2437927/101‑1 (MQ=255)
                                                                 gggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATa                                   >  1:3434659/1‑101 (MQ=255)
                                                                 gggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATa                                   <  2:1151094/101‑1 (MQ=255)
                                                                 gggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATa                                   <  2:2035201/101‑1 (MQ=255)
                                                                  ggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATaa                                  >  1:1466858/1‑101 (MQ=255)
                                                                  ggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATaa                                  <  2:1076136/101‑1 (MQ=255)
                                                                   gATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAg                                 >  1:823984/1‑101 (MQ=255)
                                                                     tCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGTGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTg                               <  1:1705349/101‑1 (MQ=255)
                                                                       cGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGACGGATGGCTTACGCGGCATGGCGCGTGCCAAAGACGGAGGCCGCAAAGG.CTGCGCCATAAGTGAg                             >  2:2823547/1‑101 (MQ=255)
                                                                            gAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCAc                        >  1:2641295/1‑101 (MQ=255)
                                                                            gAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCAc                        <  1:35817/101‑1 (MQ=255)
                                                                             aaGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCAcc                       >  2:1462285/1‑101 (MQ=255)
                                                                             aaGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCAcc                       <  1:2204048/101‑1 (MQ=255)
                                                                             aaGGTCAGACGTTGTGCAAAAGC.CCCGGGGCGGATGGCTTACGCGGTATGGCCCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCAcc                       <  1:3912069/101‑1 (MQ=255)
                                                                              aGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCAccg                      <  1:2525905/101‑2 (MQ=255)
                                                                                gTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCAccggt                    >  1:1115544/1‑98 (MQ=255)
                                                                                 tCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCAccggtt                   <  2:3704789/101‑5 (MQ=255)
                                                                                 tCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCAccggtt                   <  1:1000555/101‑5 (MQ=255)
                                                                                  cAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCA.CCGGTTc                 <  2:2113010/101‑1 (MQ=255)
                                                                                  cAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCA.CCGGTTc                 <  1:1916028/101‑1 (MQ=255)
                                                                                  cAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCA.CCGGTTc                 <  2:1522568/101‑1 (MQ=255)
                                                                                   tccgatcttgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCA.CCGGTTCg                <  2:1720856/93‑1 (MQ=255)
                                                                                   aGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCA.CCGGTTCg                <  2:835255/101‑1 (MQ=255)
                                                                                   aGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCA.CCGGTTCg                >  1:2991901/1‑101 (MQ=255)
                                                                                     aCGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGa              >  1:363053/1‑101 (MQ=255)
                                                                                      cGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGAGGCCGCAAAGGCC.GCGCCATAAGTAAGCCCA.CCGGTTCgggg             >  1:1408821/1‑99 (MQ=255)
                                                                                       gTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAgg            >  1:1649852/1‑101 (MQ=255)
                                                                                         tgtgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAggtt          <  1:2091138/101‑3 (MQ=255)
                                                                                          gtgCAAAAGCA.CCGGGGCGGATGGCTTGCGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAggttg         <  2:3438609/101‑4 (MQ=255)
                                                                                          gtgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAggttg         <  2:1633290/101‑4 (MQ=255)
                                                                                          gtgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAggttg         >  2:3219153/1‑98 (MQ=255)
                                                                                           tgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGAggttgg        >  2:1792704/1‑97 (MQ=255)
                                                                                            gCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGa      <  1:2370833/101‑1 (MQ=255)
                                                                                            gCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGa      >  2:3908466/1‑101 (MQ=255)
                                                                                            gCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGa      >  2:818119/1‑101 (MQ=255)
                                                                                             cAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGAt     >  2:1302553/1‑101 (MQ=255)
                                                                                              aaaaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGG.CGGCGCCATAAGTGAGGCCA.CCGGTTGCGA.GGTTGGATg    >  2:3777963/1‑101 (MQ=255)
                                                                                               aaaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGc   <  1:2173967/101‑1 (MQ=255)
                                                                                               aaaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGc   <  2:1871634/101‑1 (MQ=255)
                                                                                                aaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCa  >  1:1020484/1‑101 (MQ=255)
                                                                                                     |                                                                                                   
GGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGTGGGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGG.C.GCGCCATAAGTGAGCCCACCCGGTTCGGAGGGTTGGATGCA  >  NC_014034/2040272‑2040470

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG