| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,566,572 | Δ1 bp | 5.8% | intergenic (+44/+150) | purD → / ← sdaA | phosphoribosylamine‑‑glycine ligase/L‑serine ammonia‑lyase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,566,572 | 0 | C→. | 5.8% | 15.6 ‑1.6 ‑0.6 | 121 | intergenic (+44/+150) | purD/sdaA | phosphoribosylamine‑‑glycine ligase/L‑serine ammonia‑lyase |
| Reads supporting (aligned to +/- strand): new base (4/3): ref base (32/81): total (37/84) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.95e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.74e-01 | ||||||||||
Only 100 of 145 total aligned reads displayed.
TCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAAC.GGGGGCGCTGCCCCC.CTCCT..G..CTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGCCCCCGA > NC_014034/2566476‑2566672
|
cGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.ccc < 2:659481/101‑1 (MQ=37)
aCTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.ccccc < 1:1187826/101‑1 (MQ=25)
cTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.cccccc < 2:702261/101‑1 (MQ=25)
ggCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCgg < 1:1099121/101‑1 (MQ=25)
ggCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCgg < 1:2944444/101‑1 (MQ=25)
ggCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCgg < 1:503621/101‑1 (MQ=25)
cccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGa < 1:1829286/101‑1 (MQ=25)
ccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGat < 2:4180170/101‑1 (MQ=25)
ccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGat < 2:2168907/101‑1 (MQ=25)
cGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGata < 2:1018617/101‑1 (MQ=25)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGatat < 2:4131168/101‑1 (MQ=25)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCCGGatat > 1:2119448/1‑101 (MQ=25)
ggggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATAttt < 2:77585/101‑1 (MQ=21)
ggggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATAttt < 1:1697153/101‑1 (MQ=21)
gggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGGGGTGCCCCC.CCCTTGGG..CTTC.GGCCAATTCC.CCCCCCGGGATATTTc > 1:1249184/1‑101 (MQ=25)
ttCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCggg < 2:2145273/101‑1 (MQ=21)
tCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCCATTAA.ACCCCCCGGATATTTTgggg > 2:1592017/1‑100 (MQ=21)
tCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGc < 2:229061/101‑1 (MQ=21)
cTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCa < 2:2900729/101‑1 (MQ=21)
cTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCCGGCTATTTCGGGCa > 2:861613/1‑101 (MQ=21)
tGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAGCGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCaa < 1:473092/101‑1 (MQ=21)
tGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CCCTT..GGCCTTC.GGCCAATTCA.CCCCCCCGGAGAtttttggcca > 2:3957956/1‑94 (MQ=18)
gccgccGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAg < 1:45837/101‑1 (MQ=21)
cgccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGGGCTGGCCCC.CTCTT..GGCCTTT.CGCCAATTCA.CCCCCCCGGACATTTCGGGCAAGaa > 1:3980246/1‑100 (MQ=255)
cgccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGAt < 2:2060072/101‑1 (MQ=21)
cgccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGAt < 2:1620144/101‑1 (MQ=21)
cgccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGAt < 2:3164/101‑1 (MQ=21)
gccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATa < 2:2066625/101‑1 (MQ=21)
gccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATa < 2:3108432/101‑1 (MQ=21)
cgcgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCCATTCA.CCCCCCCGGATATTTCGGGCAAGATaaa > 1:3906941/1‑101 (MQ=21)
cgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAaaga < 1:1811536/101‑1 (MQ=21)
cgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAaaga > 2:3176725/1‑101 (MQ=21)
gACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAaagaa < 1:19493/101‑1 (MQ=21)
aCATCGGCTGGCGCTCGCTCTGAGACGAAACGGGGGGCCCCGCCCCC.CTTTTG.G..CCTCGGGCCAATTCA.CCCCCCGCGCCGTTTCGGGGGCGATAaaaaag > 1:4115095/1‑101 (MQ=9)
ggCTGGGGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtt < 1:3073594/101‑1 (MQ=21)
ggCTGGCGCGCCCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtt < 1:1943026/101‑1 (MQ=21)
gCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCttt > 1:2196690/1‑101 (MQ=21)
gCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCttt < 2:1078597/101‑1 (MQ=21)
cTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtttt < 1:2169706/101‑1 (MQ=21)
cTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtttt < 1:2327547/101‑1 (MQ=21)
tGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTc > 2:1009588/1‑101 (MQ=21)
tGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTc < 1:3248456/101‑1 (MQ=21)
gcgcgcgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCt < 1:3727302/101‑1 (MQ=21)
cgcgcgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCtt < 1:1533020/101‑1 (MQ=21)
cgcgcgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCtt < 1:2512408/101‑1 (MQ=21)
cgcgcgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCtt < 2:3626458/101‑1 (MQ=21)
gcgcgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt < 2:1830164/101‑1 (MQ=21)
gcgcgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt < 2:2428260/101‑1 (MQ=21)
gcgcgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt > 2:3297536/1‑101 (MQ=21)
cgcgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTc < 1:509035/101‑1 (MQ=21)
cgcgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTc < 1:2076249/101‑1 (MQ=21)
cgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCAt < 1:4145111/101‑1 (MQ=21)
gcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATc < 1:31132/101‑1 (MQ=21)
gcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATc < 1:902741/101‑1 (MQ=21)
ctctGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCt < 1:2775027/101‑1 (MQ=21)
tctGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCtt < 1:298907/101‑1 (MQ=21)
tGAGACGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTGTTTTTTTTTCTTCTTGc > 2:853783/1‑101 (MQ=18)
gagaCGAAACAGGGGGCGCTACCCCC.CTCTT..GGCCTTC.GGCCAATTCC.CCCCCCGGAATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGcc < 1:3307486/101‑1 (MQ=21)
agaCGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGccc < 2:236725/101‑1 (MQ=21)
aCGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGa > 1:1787489/1‑101 (MQ=21)
cGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaa > 2:3077751/1‑101 (MQ=21)
cGAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaa < 1:3404108/101‑1 (MQ=21)
gAAACGGGGGGCGCTGCTCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaaa < 2:3806296/101‑1 (MQ=21)
gAAACGGGGGGCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaaa < 2:2702264/101‑1 (MQ=21)
aaacggggggCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGGCTTTTCCTTTCATCTTGcccccaat > 2:4223765/6‑96 (MQ=18)
aacggggggCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCACCCCCCCGGGAAATTT.GGGCCAGAAAAAGAAAGGCTTTTTCTTTCATCTTTcccccaaaa > 1:2185736/5‑95 (MQ=2)
aacggggggCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAata < 1:3581109/97‑1 (MQ=25)
cggggggCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATc < 2:1120311/99‑1 (MQ=25)
cggggggCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATc < 2:4015211/99‑1 (MQ=25)
ggggggCGCTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATcc < 2:1571825/100‑1 (MQ=25)
ggggCGCTGCCCCCTCTTGG..C..CTTT.GGCCAATTCA..CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCgggggga < 1:3959563/101‑3 (MQ=2)
gggCGCTGCCCCCTCTTGG..C..CTTT.GGCCAATTCA..CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggggag > 1:601326/1‑98 (MQ=2)
gggCGCTG.CCCC.CTCTT..GGCCTTT.GGCCAATTCA..CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggggag > 1:1254032/1‑98 (MQ=2)
ggCGCTGCCCCCTCTTGG..C..CTTT.GGCCAATTCA..CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggggagc < 1:1048067/101‑5 (MQ=2)
ggCGCTGCCCCCTCTTGG..C..CTTT.GGCCAATTCA..CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggggagc < 1:2334609/101‑5 (MQ=2)
cgcTGCCCCC.CTCTT..GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCCAAATATCCCggggg > 2:3022218/1‑101 (MQ=25)
ccgCCCCC.CTCTT..GGCCTTC.GGCCAAGTCC.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAg < 2:3568447/99‑1 (MQ=37)
ccctcttggccTTC.GGCCAATTCC.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCt < 1:1052427/91‑1 (MQ=38)
ccctcttggccTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCt < 1:93659/91‑1 (MQ=255)
cttggccTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTgcg > 2:3746717/7‑101 (MQ=255)
ttggccTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTgcgg < 2:2553261/96‑1 (MQ=255)
ttggccTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTgcgg < 1:3070202/96‑1 (MQ=255)
ttggccTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTgcgg < 1:3176964/96‑1 (MQ=255)
tggccTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGACCGCTTgccgg > 2:1792567/5‑101 (MQ=255)
ggccTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTgcgggc > 1:1210820/4‑101 (MQ=255)
ggccTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGGCTTTTCCTTTCATCTTGCCCGAAAGATCCCGGGGGACCCCGCCTgggggc > 1:3885267/4‑101 (MQ=25)
cTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGcgggcggg > 2:2407805/1‑101 (MQ=255)
c.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGc < 2:2144179/101‑1 (MQ=255)
ggCCAATTCA.CCCCCCGGGATATTTTGGGCGAGATAAAGAAGGGGTTTTTCTTTTCTCTTTCCCGAAAAATCACGGGGGGGGCCGCCTCGTGGCggggggg > 2:756706/1‑99 (MQ=16)
gCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAg < 2:1958095/101‑1 (MQ=255)
gCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAg < 1:3377084/101‑1 (MQ=255)
aaTTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAgcgc > 2:1742483/1‑101 (MQ=255)
aTTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGcc > 1:3091680/1‑101 (MQ=255)
aTTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGcc > 1:2704649/1‑101 (MQ=255)
aTTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGcc > 2:1662111/1‑101 (MQ=255)
ttCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGccc > 1:652542/1‑101 (MQ=255)
tCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCAGGGGAGCCCGCTTGCGGGGGGGGGGAGCGcccc > 2:1633744/1‑101 (MQ=255)
cA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGccccc < 1:2029001/101‑1 (MQ=255)
a.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGCCCCCg > 1:584338/1‑101 (MQ=255)
ccccccGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGCCCCCGa < 1:3964337/101‑1 (MQ=255)
|
TCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAAC.GGGGGCGCTGCCCCC.CTCCT..G..CTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGCCCCCGA > NC_014034/2566476‑2566672
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 26 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|