| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,254,687 | Δ1 bp | 100% | intergenic (+12/‑171) | glpX → / → recJ | fructose‑1,6‑bisphosphatase/single‑stranded‑DNA‑specific exonuclease RecJ |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,254,687 | 0 | G→. | 100.0% | 52.9 | 107 | intergenic (+12/‑171) | glpX/recJ | fructose‑1,6‑bisphosphatase/single‑stranded‑DNA‑specific exonuclease RecJ |
| Reads supporting (aligned to +/- strand): new base (1/88): ref base (17/0): total (19/88) | ||||||||||
| Fisher's exact test strand distribution p-value = 9.22e-19 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.70e-10 | ||||||||||
Only 100 of 144 total aligned reads displayed.
ACCCGAAATTCATCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.CCGGGGGGTATGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTCACCTTGGCCGAAATATCCCGGGGGGGAATTTG > NC_014034/3254587‑3254780
|
cccGAAATTCATCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGGGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACgg > 1:1919069/1‑101 (MQ=255)
cGAAATTCATCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACcggg > 2:653176/1‑101 (MQ=255)
gAAATTCATCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACggggg > 2:154752/1‑101 (MQ=255)
aaaTTCATCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACggggga < 1:3779224/101‑2 (MQ=255)
aaaTTCATCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACggggga > 2:2549896/1‑100 (MQ=255)
aTTCATCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACgggggact < 2:662073/101‑4 (MQ=255)
aTTCATCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACgggggact < 1:1752695/101‑4 (MQ=255)
ttCATCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCTACCcgggggcg > 2:1546865/1‑99 (MQ=255)
ttCATCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACgggggactg < 1:3294858/101‑5 (MQ=255)
tCATCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACgggggggggc > 1:1762419/1‑97 (MQ=255)
tCATCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACgggggactgc < 2:2883316/101‑6 (MQ=255)
tCATCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACcgggggcgcc > 1:3378401/1‑97 (MQ=255)
cATCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCTACCgggggggggc > 1:2695307/1‑97 (MQ=255)
cATCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCTACCgggggggcgc > 2:2291687/1‑97 (MQ=255)
cATCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACgggggactgcc < 2:1006146/101‑7 (MQ=255)
aTCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACgggggggcggcc > 2:2277552/1‑95 (MQ=255)
cGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGCTCCGCTGAGGCAACGNC.ACgggggtctncnnnn > 2:1414957/1‑92 (MQ=255)
ggaCCGAAACGATCCTGATGCGATCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTccc < 1:818320/100‑1 (MQ=255)
agaCCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCTACCggggggggccggccc > 1:2374824/1‑92 (MQ=255)
gaCCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTcccc < 1:443784/101‑1 (MQ=255)
aCCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTccccc < 2:516546/101‑1 (MQ=255)
aCCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTccccc < 1:129560/101‑1 (MQ=255)
aCCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTccccc < 2:3311283/101‑1 (MQ=255)
gAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GTGGGACTGCCGTCCCCCGCa < 2:332946/101‑1 (MQ=255)
aaaCGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCAc < 1:578331/101‑1 (MQ=255)
aaCGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCAcc < 2:884382/101‑1 (MQ=255)
aCGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCACCCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCAccc < 1:489362/101‑1 (MQ=255)
aCGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCAccc < 1:2550087/101‑1 (MQ=255)
cGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCAcccc < 2:1445440/101‑1 (MQ=255)
tCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTg < 1:3966850/101‑1 (MQ=255)
ccTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTgc < 1:3129750/101‑1 (MQ=255)
tGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTgcgc < 1:2457509/101‑1 (MQ=255)
aTGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGt < 2:645650/101‑1 (MQ=255)
aTGCGCTCGAAAACCGGCTCGGGGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACGGGGGG.GTGCCGTCCCCCCCCCCCCCCCcgcgc > 1:588972/1‑100 (MQ=255)
gcTCGAAAACCGTCTCGGTGCGCCGGGTGATCTATCGCACCCCGATCCGCTGAGGCAACGCT.CC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.ttt < 2:4032380/101‑1 (MQ=255)
gcTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.ttt < 1:237258/101‑1 (MQ=255)
gcTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.ttt < 2:2767783/101‑1 (MQ=255)
gcTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.ttt < 1:798979/101‑1 (MQ=255)
aaaaCCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.Ca < 2:1739656/101‑1 (MQ=255)
aaaaCCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.Ca < 2:3638232/101‑1 (MQ=255)
aaaCCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.Caa < 1:2784905/101‑1 (MQ=255)
aaCCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACGGGGGG.CTGCCCGCCCCCCCCCCCCCCGCGCGGA.TTTTTc.ccaa > 2:3463162/1‑98 (MQ=255)
aaCCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAg < 1:758377/101‑1 (MQ=255)
gtcTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGaaa < 2:2217131/99‑1 (MQ=38)
ggCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACGGGGGGGGCGCCGGCCCCCCCCCCCCCCCCCCGTC.TTTTGC.Cacgtaa > 2:3322313/1‑96 (MQ=255)
ggCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGaaa < 2:3443484/101‑1 (MQ=38)
ggCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGaaa < 1:3474576/101‑1 (MQ=38)
ggCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGaaa < 2:912067/101‑1 (MQ=38)
ggCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGaaa < 2:2081779/101‑1 (MQ=38)
gCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACGGGGGG.CTGCCCGCCCCCCCCCCCCCCCCGCGTG.TTTTTC.CCAGGaaaa > 2:368613/1‑101 (MQ=255)
gCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGaaaa < 1:3421783/101‑1 (MQ=38)
tCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACg < 1:3682707/101‑1 (MQ=38)
tCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACg < 1:1513635/101‑1 (MQ=38)
cGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACgg < 2:249460/101‑1 (MQ=38)
ggTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACGGGGGG.GTGCCGGCCCCCCCCCCCCCCCCCCGCC.TTTTTC.CCAGGAAAAAggg > 1:1859035/1‑101 (MQ=255)
ggTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACCGGGGGGGGGCGGCCCCCCCCCCCCCCCCCCCCCC.TTTTTC.CAAGGaaaaaag > 2:2207472/1‑98 (MQ=255)
gTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACgggg < 1:2207301/101‑1 (MQ=38)
tGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACGGGGGGGA.GCCGTCCCCCCCCCCCCCCCCGCGCA.TTTTTT.CAAGGAAAAAAGGGc > 1:1131513/1‑101 (MQ=255)
tGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGc < 1:54828/101‑1 (MQ=38)
gcgcCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGcc < 2:730245/101‑1 (MQ=38)
gcgcCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGcc < 1:3153603/101‑1 (MQ=38)
gcCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCACCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGt < 1:1132523/101‑1 (MQ=38)
ccGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGtt < 1:653253/101‑1 (MQ=38)
cGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGttt > 1:3908832/1‑101 (MQ=38)
cGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGACCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGttt < 2:197639/101‑1 (MQ=38)
gggTGATCTATCGCACCCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCCCCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTc < 1:3469453/101‑1 (MQ=38)
gggTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTc < 2:712743/101‑1 (MQ=38)
gggTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTc < 2:4012417/101‑1 (MQ=38)
ggTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCCCCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGTCCGTTTCa < 2:605702/101‑1 (MQ=38)
ggTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTCa < 2:602518/101‑1 (MQ=38)
gTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACGGGGGG.GTGCCGTCCCCCCCACCCCCCCCGCGCATTTTTCC.CAAGAAAAAAGGGGcgggtctc > 2:3276193/1‑94 (MQ=255)
gTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACGGGGGG.GTCCCGGCCCCCGCCCCCCCCCCGCGTT.TTTTTG.CAAGGAAAAAGGGGGCGGTTGAc > 2:3522992/1‑101 (MQ=255)
gTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGcctctgcca < 2:3306716/101‑8 (MQ=37)
tGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACGGGGGG.CTGGCGTCCCCCGCCCCCCCCCCGCGCA.TTTTGC.CAAGGGAAACGGGGGCGTTTCCcc > 2:2598823/1‑101 (MQ=255)
tGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACGGGGGG.CTGCCGGCCCCCCCACCCCCCGCGCGGA.TTTTGC.CAACGAAAACCGGGGCGGTTCAcc > 2:1056263/1‑101 (MQ=255)
aTCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTCACCtt < 2:1206395/101‑1 (MQ=38)
tCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTCACCTTg < 2:2482124/101‑1 (MQ=38)
tATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTCACCTTGGc < 1:346560/101‑1 (MQ=38)
cgaaaCCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCTCCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTCACCTTGGCCGa < 2:1157432/98‑1 (MQ=38)
cGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTCACCTTGGCCGa < 2:949579/101‑1 (MQ=38)
gagaCCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGCACCCCGCTCCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTCACCTTGGCCGaa < 1:2163952/98‑1 (MQ=37)
gCAACCCGATCCGCTGAGGCAACGCT.ACGGGGGGGGGGCGGCCCCCCCCCCCCCCCCCCCGCG.TTTTTG.CAGGGAAAACGGGGCGGTTCTCCCCTGGCCgc > 1:422436/1‑100 (MQ=255)
gCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTCACCTTGGCCGaa < 1:1913470/101‑1 (MQ=38)
aaCCCGATCCGCTGAGGCAACGCT.CC.GGGGGCCTGCCGGCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTCACCTTGGCCGAAat < 1:4049177/101‑1 (MQ=38)
aCCCGATCCGCTGAGGCAACGCT.ACGGGGGG.CCGCCGCCCCCCGCCCCCCCCGCGCGGA.TTTTGT.CAAAGAAAACGGGGCCGCTTCACCCTGGCCGacaca > 2:2053847/1‑97 (MQ=255)
cccGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTCACCCTGGCCGAAatat < 2:2695101/101‑1 (MQ=38)
cGATCCGCTGAGGCAACGCT.ACGGGGGG.GGGCCGGCCCCCCCCCCCCCCCCGCGGA.TTTTTCTCAGGAAAAAAGGGGCGGTTTC.CCTTTGCCGCAAAATcc > 1:2624035/1‑101 (MQ=255)
cGATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTCACCTTGGCCGAAATATcc < 2:2858568/101‑1 (MQ=38)
gATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTCACCTTGGCCGAAATATccc < 2:2129508/101‑1 (MQ=38)
gATCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTCACCTTGGCCGAAATATccc < 2:864603/101‑1 (MQ=38)
aTCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTCACCTTGGCCGAAATATCCCg < 2:2567984/101‑1 (MQ=38)
tCCGCTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTCACCTTGGCCGAAATATCCCgg < 2:1859590/101‑1 (MQ=38)
cTGAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTCACCTTGGCCGAAATATCCCgggggg < 1:1227345/101‑1 (MQ=38)
gAGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTCACCTTGGCCGAAATATCCCGGGGGGGa < 2:1737455/101‑1 (MQ=38)
aGGCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTCACCTTGGCCGAAATATCCCGGGGGGGaa < 2:1538256/101‑1 (MQ=38)
ggCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTCACCTTGGCCGAAATATCCCGGGGGGGAAt < 2:2832792/101‑1 (MQ=38)
gCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTCACCTTGGCCGAAATATCCCGGGGGGGAAtt < 1:64055/101‑1 (MQ=38)
gCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTCACCTTGGCCGAAATATCCCGGGGGGGAAtt < 1:3314392/101‑1 (MQ=38)
gCAACGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTCACCTTGGCCGAAATATCCCGGGGGGGAAtt < 2:3909891/101‑1 (MQ=38)
aaCGCT.AC.GGGGGACTGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTCACCTTGGCCGAAATATCCCGGGGGGGAATTTg < 2:2581988/101‑1 (MQ=38)
|
ACCCGAAATTCATCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.CCGGGGGGTATGCCGTCCCCCGCACCCCCTGCGCGTA.TTTTGC.CAAGGAAAACGGGGCCGTTTCACCTTGGCCGAAATATCCCGGGGGGGAATTTG > NC_014034/3254587‑3254780
Base quality scores:
ATCG
< 3 ≤
ATCG
< 19 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|