Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 985,690 | Δ1 bp | 100% | intergenic (+29/‑55) | betB → / → betA | betaine‑aldehyde dehydrogenase/choline dehydrogenase |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 985,690 | 0 | C→. | 100.0% | 17.7 | 104 | intergenic (+29/‑55) | betB/betA | betaine‑aldehyde dehydrogenase/choline dehydrogenase |
Reads supporting (aligned to +/- strand): new base (24/71): ref base (6/1): total (31/73) | ||||||||||
Fisher's exact test strand distribution p-value = 2.43e-03 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.89e-06 |
Only 100 of 144 total aligned reads displayed.
CCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGCCGGTCCCCCCCCGGACCCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCGGGCGG > NC_014034/985591‑985785
|
ccGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGAcc < 2:1714632/101‑1 (MQ=255)
ccGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGAcc < 2:3759324/101‑1 (MQ=255)
gcgATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGAcccc < 1:3180661/101‑1 (MQ=255)
gcgATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCGGAcccc > 1:1065622/1‑101 (MQ=255)
cgATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGTGTCCCCCCCCGGAccccc > 1:150483/1‑101 (MQ=255)
cgATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGAccccc < 2:4084470/101‑1 (MQ=255)
gATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGAcccccc < 2:2464632/101‑1 (MQ=255)
gATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGAcccccc < 1:2769424/101‑1 (MQ=255)
gATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCCGGcccccc > 2:2408924/1‑101 (MQ=255)
aTCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGAccccccg < 2:1602422/101‑2 (MQ=255)
aTCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGAccccccg < 1:286531/101‑2 (MQ=255)
aTCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGAccccccg < 1:2733170/101‑2 (MQ=255)
aTCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCCGCccccccc > 1:2563804/1‑101 (MQ=255)
tCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGAccccccgg < 2:3728294/101‑3 (MQ=255)
gAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGAccccccggcg < 1:3046448/101‑5 (MQ=255)
aGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGt < 2:2559127/101‑1 (MQ=255)
gCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTa < 1:1142011/101‑1 (MQ=255)
aCTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTAtt < 2:873763/101‑1 (MQ=255)
aCTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCCCGccccccccccggtt > 1:3930302/1‑94 (MQ=255)
cTATACGCAGGTGAAGGCCGTCTATGTCGGCATTGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTAttt < 1:2265546/101‑1 (MQ=255)
tataCGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGTGTCCCCCCCCGGA.CCCCCCG.GCGTATTTg < 2:150459/101‑1 (MQ=255)
tataCGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGGCCCCCCCCGCCCCCCCCG.GCggtttt > 1:2461147/1‑96 (MQ=255)
tataCGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCGGA.CCCCCCG.CCGTATTTg > 1:398600/1‑101 (MQ=255)
taCGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTgcg < 1:3361640/101‑1 (MQ=255)
aCGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGACCCCCCC..GCGTATTTgcgc > 2:591491/1‑101 (MQ=255)
aCGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTgcgc < 2:3595537/101‑1 (MQ=255)
gCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGACCCCCCGG.GGGGATTTggcca > 2:1848604/1‑97 (MQ=255)
gCAGGGGAAGCCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCa < 2:1881932/101‑1 (MQ=255)
cAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCaa < 1:2274779/101‑1 (MQ=255)
tggTGAAGGCTGTCTAAGTCGGCATGGGGCCGGTCGAAAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAg < 1:2441080/100‑1 (MQ=255)
aGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAg < 2:1999101/101‑1 (MQ=255)
aGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAg < 2:2131632/101‑1 (MQ=255)
aGGTGAAGGCCGTCTATCTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAg < 2:3127340/101‑1 (MQ=255)
gAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGaaaa < 2:737603/101‑1 (MQ=255)
aaGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGaaaaa < 1:2564140/101‑1 (MQ=255)
aGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCCGA.CCCCCCG.GCGGATTTGCGCCAAGaaaaaa > 1:2055596/1‑101 (MQ=255)
ggCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAAc < 2:3433675/101‑1 (MQ=255)
gCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACa < 2:646831/101‑1 (MQ=255)
gCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACa < 2:2563613/101‑1 (MQ=255)
cGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAAAAgg > 2:983925/1‑101 (MQ=37)
cTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGtt < 2:697815/101‑1 (MQ=255)
tATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGGGGCCCCCCCCCGCCCCCCCC.GCGTTTTTG.GCCAAAAAAAAAAAAGGta > 1:3849/1‑100 (MQ=255)
tATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCCGACCCCCCCG.CCG.ACTTGCGCCCAGAAAAAACAAGGGTc > 2:1145413/1‑101 (MQ=255)
aTGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCa < 2:25810/101‑1 (MQ=255)
aTGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCa < 1:2616132/101‑1 (MQ=255)
tGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAg < 1:3078362/101‑1 (MQ=255)
gTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCaag > 2:4191584/1‑99 (MQ=39)
gTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAgg < 2:395026/101‑1 (MQ=255)
tCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGc < 1:786654/101‑1 (MQ=255)
tCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGc < 1:3596746/101‑1 (MQ=255)
cGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCa < 2:2256516/101‑1 (MQ=255)
cGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCa < 2:2167026/101‑1 (MQ=255)
ggCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCCGAGCCCCCC..GCGGTGTTGTGCCGAGAAAAAACAAGGGTCAAGCag > 2:3826844/1‑101 (MQ=255)
gCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCaga < 1:2889875/101‑1 (MQ=255)
aTGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCCGA.CCCCCCG.GCGGATTTGCGCCCAGAAAAAACAGGGTTCAGGCAGAgg > 1:657398/1‑101 (MQ=255)
gggCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAACACAGGGTTCAGGCAGAGGGTc > 2:1209114/1‑101 (MQ=38)
ccGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGCGCCCCCCG.CCGT.TTTGCCCCCAGACAAAACAGGGGTGAGACAGAggggccgg > 2:4223402/1‑96 (MQ=255)
cGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCGGACCCCCCC..GCGGATTTCGGCCAAAAAAAAAAAGGGTGCAGGGAGAGGGGggcgc > 1:3495027/1‑101 (MQ=255)
ggTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTGCCCCCCCGGA.CCCCCCG.GCGGCTTTGCGCCAACAAAAACAAAGGTAAAGGCAGGAGGGcgcgcg > 2:3842886/1‑101 (MQ=255)
gTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCga < 1:2189271/101‑1 (MQ=255)
gTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCCGGCCCCCCCGTGCAT.CTTGCCCCACGAAAAAAACGGGTT.AGGCAGAggggggggacg > 2:4184007/1‑93 (MQ=255)
cGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCgatg < 2:3741614/101‑1 (MQ=255)
agagCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGGTCAGGCAGAGGGGCGCGCgatgga > 1:2751257/1‑101 (MQ=37)
agagCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCCG.GCCCCCCG.GCGGGTTTGCGCCAAGAAAACAGAGGGTGCAGGGAGAGGGGCGCGCgaaggg > 2:3971968/1‑100 (MQ=255)
gagCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCgatggat < 1:591555/101‑1 (MQ=255)
gagCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCgatggat < 1:4151861/101‑1 (MQ=255)
ccccTATTGAAGCGCAGGCC.GGGGGGGCTCCCCCCGG.CCCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCAATGGATGCg < 2:3296833/101‑1 (MQ=37)
ccccTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCg < 2:2055458/101‑1 (MQ=255)
ccccTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCg < 1:266617/101‑1 (MQ=255)
cccTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCgg < 1:1527722/101‑1 (MQ=255)
cccTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.GCCCCCCG.GCGTATTTTGGGCAAGAAAAAACAAGGCTCAGGGCGAGGGGCGCGGGACGGATGCgg > 1:3347371/1‑101 (MQ=255)
cTATTGAAACGCAGGCC.GGGGGGTCCCCCCNCGG.CCCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGNGCGATGGATGCGGAt < 1:744529/101‑1 (MQ=38)
aTTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTa < 1:4221067/101‑1 (MQ=255)
tGAAACGCAGGCC.GGGGGGGCCCCCCCCCG.GCCCCCCG.GCGGATTTTCGCCAAGAAAAAAAAGGGGTCAGGCCGGGGGGCGGGCGGTGGGGGCGGGTTAtg > 1:1579393/1‑101 (MQ=255)
gAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGGCGCGCGATGGATGCGGATTAtgt > 2:2622346/1‑101 (MQ=37)
aaaCGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTAtgtg < 2:1489757/101‑1 (MQ=255)
aaCGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGa < 2:657321/101‑1 (MQ=255)
agccAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGAt < 1:2103846/98‑1 (MQ=38)
cGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATc < 2:963200/101‑1 (MQ=255)
cGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATc < 1:2365132/101‑1 (MQ=255)
gCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCg < 1:3141772/101‑1 (MQ=255)
gCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCg < 1:1209208/101‑1 (MQ=255)
cAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCG.GCGTAATTTCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGCCGCGCGATGGATGCGGATTATGTGATCGt > 2:450944/1‑101 (MQ=38)
ggcc.ggggGGTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTg < 2:2268261/101‑1 (MQ=255)
cgggggggccccccccGGA.CCCCCCG.GCGGATTTGCGCCAAGAAAAAACAGGGGTCAGGCAGAGGGGCGCGCGATGGGTGCGGGTTATGTGATCGTTgggg > 2:539145/9‑101 (MQ=255)
cggggggTCCCCCCCCCGA.CCCCCCG.GCGTATTTGCGCCCAGAAAAAACAAGGGTCAGGCCGAGGGGCGCGCGGTGGATGCGGATTATGGTTTCGTTtggg > 2:661276/6‑101 (MQ=16)
ggggggTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGCTTATGGGATCGTTGGGGc > 2:3437574/5‑101 (MQ=38)
ggggggTCCCCCCCCGGA.CCCCCCG.GCGCATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTTGGGc > 1:1978034/5‑101 (MQ=38)
ggggTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAg < 1:984016/99‑1 (MQ=255)
gggTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAgg < 1:3469143/100‑1 (MQ=255)
gggTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAgg < 1:904878/100‑1 (MQ=255)
ggTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGc < 1:852369/101‑1 (MQ=255)
gTCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCt < 1:3077192/101‑1 (MQ=255)
tCCCCCCCCGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTc < 2:889700/101‑1 (MQ=255)
cccccccGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTccg > 2:3365429/1‑99 (MQ=255)
ccccccGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCggg < 1:1576112/101‑1 (MQ=255)
cccccGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCGggc < 2:2460963/101‑1 (MQ=255)
ccccGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCGggcg > 2:1513137/1‑101 (MQ=255)
cccGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCGggcgg > 2:1031966/1‑101 (MQ=255)
cccGGA.CCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCGggcgg > 2:3554767/1‑101 (MQ=255)
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CCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGCCGGTCCCCCCCCGGACCCCCCCG.GCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCGGGCGG > NC_014034/985591‑985785
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|