Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 1,721,519 +GG 100% intergenic (‑414/+32) RCAP_rcc01588 ← / ← RCAP_rcc01589 GSCFA family protein/ErfK/YbiS/YcfS/YnhG family protein

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140341,721,5191.→G100.0% 36.5 14intergenic (‑414/+32)RCAP_rcc01588/RCAP_rcc01589GSCFA family protein/ErfK/YbiS/YcfS/YnhG family protein
Reads supporting (aligned to +/- strand):  new base (5/9):  ref base (0/0):  total (5/9)
*NC_0140341,721,5192.→G100.0% 35.0 14intergenic (‑414/+32)RCAP_rcc01588/RCAP_rcc01589GSCFA family protein/ErfK/YbiS/YcfS/YnhG family protein
Reads supporting (aligned to +/- strand):  new base (5/9):  ref base (0/0):  total (5/9)

GGGTTCCAAATAACGCGCTGCGGGCCTCCCTCCCGCAGCGCTTTATTTTTGGCC.GG.TCGCCTTGGGGATTT.CGCCTCGGCTGCGCCGAGGCGACCCGCC....GGGCTGCGCCCCCGGACCCCCCCCGAAGATCTCAGATCACCTTGACCTGCGTGCCGACCGGGCAGAGCGGATAAAGTT  >  NC_014034/1721421‑1721597
                                                                                                      ||                                                                                
gggTTCCAAATAACGCGCTGCGGGCCTCCCTCCCGCAGCGCTTTATTTTTGGCC.GG.TCGCCTTGGGGATTT.CGCCTCGGCTGCGCCGAGGCGACccgcccg                                                                                  >  1:653740/1‑99 (MQ=255)
    tCCAAATAACGCGCTGCGGGCCTCCCTCCCGCAGCGCTTTATTTTTGGCC.GG.TCGCCTTGGGGATTT.CGCCTCGGCTGCGCCGAGGCGACccgccccgggg                                                                              >  1:1669547/1‑95 (MQ=255)
       aaaTAACGCGCTGCGGGCCTCCCTCCCGCAGCGCTTTATTTTTGGCC.GG.TCGCCTTGGGGATTT.CGCCTCGGCTGCGCCGAGGCGACCCGCC....cgggggggg                                                                       >  2:2300277/1‑95 (MQ=255)
        aaTAACGCGCTGCGGGCCTCCCTCCCGCAGCGCTTTATTTTTGGCC.GG.TCGCCTTGGGGATTT.CGCCTCGGCTGCGCCGAGGCGACCCGCC....ggggggtgcg                                                                      >  2:4109217/1‑94 (MQ=255)
                     gggCCTCCCTCCCGCAGCGCTTTATTTTTGGCC.GG.TCGCCTTGGGGATTT.CGCCTCGGCTGCGCCGAGGCGACCCGCCCG..GGGCCGGGCCCCCCGGccccc                                                           >  2:2699279/1‑101 (MQ=25)
                       gCCTCCCTCCCGCAGCGCTTTATTTTTGGCC.GG.TCGCCTTGGGGATTT.CGCCTCGGCTGCGCCGAGGCGACCCGCCGG..GGGGTGGGCCCCCCGGccccccc                                                         >  2:2024375/1‑101 (MQ=25)
                           cccccccGCGTCGTTTTTTTTTTGGCG.GG.CCCCCTGGGGTTTTC.CGCCCCGGCCCCCCCGGGGCCCCCCGCCGG..GGGCTGCGCCCCCGGACCCCCCCCGaa                                                     <  1:1998221/101‑1 (MQ=2)
                             ctcccGCAGCGCTTTATTTTTGGCC.GG.TCGCCTTGGGGATTT.CGCCTCGGCTGCGCCGAGGCGACCCGCCGG..GGGCTGGGCCCCCGGACCCCCCCCGCAGa                                                   >  2:537195/1‑101 (MQ=21)
                             ctcccGCAGCGCTTTATTTTTGGCC.GG.TCGCCTTGGGGATTT.CGCCTCGGCTGCGCCGAGGCGACCCGCCGG..GGGCGGCGCCCCCGGGccccccccccaga                                                   >  2:2471561/1‑96 (MQ=21)
                              ccccGCGGCTTTTTTTTTTGGGCC.GG..CCCCTTGGGGGTTTCCCCCGCGGCCGCGCCGGGGCCCCCCGCCGG..GGGCTGCGCCCCCGGACCCCCCCCGAAGAt                                                  <  1:2472855/100‑1 (MQ=9)
                                 cGCAGCGCTTTATTTTTGGCC.GG.TCGCCTTGGGGATTT.CGCCTCGGCTGCGCCGAGGCGACCCGCCCGGGGGGGGGCGCCCCCGGCccccccccccccatc                                                 >  1:1393939/1‑94 (MQ=21)
                                     ggtttttTTTTTGGGCC.GG.CCTCCGGGGGGTTTC.CCCCTGGGCCGCGCAGGGGCGCCCCGCCGG..GGGCTGCGCCCCCGGACCCCCCCCGAAGATCTCAGAt                                           <  1:1288228/97‑1 (MQ=255)
                                     cgtttttTTTTTTGGGC.GGTTCGCTTTGGGGTTTC.CCCCGCGGCGCCCCCGGGGCCCCCCGCCGG..GGGCTGCGCCCCCGGACCCCCCCCGAAGATCTCAGa                                            <  1:3416447/97‑1 (MQ=9)
                                        cTTTATTTTTGGCC.GG.TCGCCTTGGGGATTT.CGCCTCGGCTGCGCCGAGGCGACCCGCCGG..GGGCTGCGCCCCCCGACCCCCCCCGAAGATCTCAGATCAc                                        >  2:2065036/1‑101 (MQ=25)
                                           tttttttGGCCGGG.TGGGTTTGGGGTTTT.CGCCGCGGCCGCGCCGGGCCCCCCCGCCGG..GGGCTGCGCCCCCGGACCCCCCCCGAAGATCTCAGATCACCt                                      <  2:3891594/99‑1 (MQ=12)
                                              ttgtGGCC.GC.TCGCGTTGGCGTTTC.CGCCGGGGCGGCGCGGAGGCCCCCCGCCGG..GGGCTGCGCCCCCGGACCCCCCCCGAAGATCTCAGATCACCTTGAc                                  <  2:255739/98‑1 (MQ=255)
                                                  ggCG.GG.TCGCCTGGGGGTTCC.CGCCCGGGCGGCCCCGGGCCGCCCCGCCGG..GGGCTGCGCCCCCGGACCCCCCCCGAAGATCTCAGATCACCTTGACCTGc                              <  1:2699485/101‑1 (MQ=255)
                                                                  gggttttccGCCGCGGCCGCGCGGAGGCCCCCCGCCGG..GGGCTGCGCCCCCGGACCCCCCCCGAAGATCTCAGATCACCTTGACCTGCGTGCCGACCGGGc                 <  1:4217529/93‑1 (MQ=21)
                                                                         ccGCCGCGGCGGCCCCGAGGCCCCCCGCCGG..GGGCTGCGCCCCCGGACCCCCCCCGAAGATCTCAGATCACCTTGACCTGCGTGCCGACCGGGCAGAGCgg          <  2:3426966/100‑1 (MQ=255)
                                                                                 gCTGCGCCGAGGCGACCCGCCGG..GGGCTGGGCCCCCGGACCCCCCCCCCAGAACTCAGATAACCCTGGCCTCCGTGCCGCCCGGGCAGAGCGGACAAAggt  >  1:1908908/1‑99 (MQ=12)
                                                                                                      ||                                                                                
GGGTTCCAAATAACGCGCTGCGGGCCTCCCTCCCGCAGCGCTTTATTTTTGGCC.GG.TCGCCTTGGGGATTT.CGCCTCGGCTGCGCCGAGGCGACCCGCC....GGGCTGCGCCCCCGGACCCCCCCCGAAGATCTCAGATCACCTTGACCTGCGTGCCGACCGGGCAGAGCGGATAAAGTT  >  NC_014034/1721421‑1721597

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG