| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,820,393 | +C | 2.1% | intergenic (+84/‑102) | RCAP_rcc01683 → / → RCAP_rcc01684 | terminase‑like family protein/HK97 family phage portal protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,820,393 | 2 | .→C | 2.1% | 2.2 ‑3.7 ‑0.2 | 144 | intergenic (+84/‑102) | RCAP_rcc01683/RCAP_rcc01684 | terminase‑like family protein/HK97 family phage portal protein |
| Reads supporting (aligned to +/- strand): new base (0/3): ref base (102/39): total (102/42) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.36e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.94e-01 | ||||||||||
Only 100 of 175 total aligned reads displayed.
AGGTGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACGAGGAGAACGG > NC_014034/1820293‑1820493
|
aGGTGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGaaa > 1:299096/1‑101 (MQ=255)
aGGTGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGaaa > 1:2348253/1‑101 (MQ=255)
aGGTGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGaaa > 1:1901149/1‑101 (MQ=255)
ggTGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..c < 1:2892928/101‑1 (MQ=255)
ggTGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..c < 2:2925281/101‑1 (MQ=255)
gcgcGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..cccc < 2:687525/101‑1 (MQ=255)
gcgGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..g < 1:1220373/101‑1 (MQ=255)
gggCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCt > 1:1383355/1‑101 (MQ=255)
tttGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTg > 1:3042969/1‑101 (MQ=255)
tttGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTg > 2:1478767/1‑101 (MQ=255)
tGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGcc > 1:302584/1‑101 (MQ=255)
tGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGcc > 1:3630248/1‑101 (MQ=255)
tGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGcc > 2:1324856/1‑101 (MQ=255)
gAGCGCGCAAGGGCGTATTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGCGCGGGGGTGTGAAA..CCCCC..GCTTCTGCcg > 1:636293/1‑101 (MQ=255)
cgcagaaGGGCGTATTTGGACCAGGAAAAA.GTGGCTTGTTTTTTCTT.GGTA.AAAATCCGCCCGGGGGGGGCGGGGGTGTAAAC..CCCCC..GCTTCTGCCGCgg < 2:1844980/96‑1 (MQ=18)
gcAAGGGCGTATTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGaaa > 1:1518258/1‑101 (MQ=255)
gcAAGGGCGTATTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGaaa > 1:127867/1‑101 (MQ=255)
gcAAGGGCGTATTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGaaa > 1:2858774/1‑101 (MQ=255)
aaaGGGCGTATTTGGACCAGAAAAAA.GCTGGTTTTTTTTTCTG.GTTA.AAAATACGCCGGGGGGGTGCGGGGGTGTGAAC..CCCCC..GCTTCTGCCGCGGAAAt < 2:302539/100‑1 (MQ=21)
ggggCTTATTTGGACCAGAAAAAG.GGTGTGTTTTTTTTTGT.GGTG.AAAATGCGCCGGGGGGGTGGGGGGGTGTGAAC..CCCCC..GCTTCTGCCGCGGAAATCt < 1:2742653/100‑1 (MQ=255)
aGGGCGTATTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCt > 2:520506/1‑101 (MQ=255)
aGGGCGTATTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCt > 2:2778053/1‑101 (MQ=255)
tgTATTTGGACCAGGAAATA.GTTGCGTGTTTTTTCTT.GGTG.AAAATACCCCACGGGGGTGCGGGGATGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTc < 2:1929211/100‑1 (MQ=37)
cGTATTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTc > 2:4021619/1‑101 (MQ=255)
cGTATTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTc > 1:1951570/1‑101 (MQ=255)
gTATTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCg > 1:1697249/1‑101 (MQ=255)
gTATTTGGACAAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTA.AAAATACGCCAGGGGGGTGGGGGGGTGTAAAC..CCCCC..GCTTCTGCCGCGGAAATCTGGTCg < 2:333417/101‑1 (MQ=37)
gTATTTGGACAAGAAAAAG.GCTGGTTGTTTTTTCTT.GGTG.AAAATCCGCCAGGGGGGGGGGGGGGTGTAAAC..CCCCC..GCTTCTGCCGCGGAAATCTGGTCg < 2:1126590/101‑1 (MQ=25)
tATTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGa > 1:990464/1‑101 (MQ=255)
ttttGGGCCAAGAAAAAGGTTGTTTTTTTTTTTTG.GGAA.AAAAGCCGCCGGGGGGGGGGGGGGGTGTAAAC..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGa < 1:3968621/100‑1 (MQ=255)
ttttGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGGGGGGGTGTGAAC..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGaa < 1:2040081/100‑1 (MQ=255)
aTTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGaa > 2:2457600/1‑101 (MQ=255)
aTTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGaa > 1:3336254/1‑101 (MQ=255)
tttGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGaaa > 2:1770409/1‑101 (MQ=255)
tGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATATGGTCGAAAgg > 2:1302158/1‑101 (MQ=255)
ggagagagAAAAA.GGTG.GTTTTTTTTTTT.GGGGAAAAAGGCGCGGGGGGGGGGGGGGGGTGGAAAC..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAggg < 1:1757427/94‑1 (MQ=255)
agACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGG.GGGAAA..ACCCC..GGCTCTTCCCCCGGAATCTGGGCGGAAgggg > 2:846070/2‑100 (MQ=21)
gACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGt > 1:3910866/1‑101 (MQ=255)
agaaaaag.GTTGTGTGTTTTTTTTG.GGAA.AAAACCCGCCGGGGGGGGGGGGGGGTGAAAAC..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCggg < 2:4119883/98‑1 (MQ=255)
gAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGt > 1:2226376/1‑101 (MQ=255)
gAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGt > 1:301819/1‑101 (MQ=255)
aaag.GCTGTGTTTTTTTTTTT.GGTA.AAAATCCGCCAGGGGGGTGGGGGGGTGTAAAC..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGttt < 1:2636724/101‑1 (MQ=255)
aaag.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAC..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGttt < 2:1347390/101‑1 (MQ=255)
aaaa.GCTGGGTGTTTTTCCTT.GGTA.AAAATACGCCAGGGGGGTGCGGGGGTGTGAAC..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGttt < 2:1243714/101‑1 (MQ=37)
aaaa.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGttt > 1:3344645/1‑101 (MQ=255)
aaaa.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGGGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGACGAAAGGGTCGGGGttt > 1:3123613/1‑101 (MQ=255)
aa.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTc > 1:563274/1‑101 (MQ=255)
aa.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTc < 2:1037926/101‑1 (MQ=255)
a.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTcc > 1:236359/1‑101 (MQ=255)
gCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAC..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTccc < 2:1383255/101‑1 (MQ=255)
gCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGGTTTccc > 1:2524494/1‑101 (MQ=255)
actggggtttttttCTTGGGGG.AAAATCCGCCGGGGGGGGGGGGGGGTGGGAAC..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTcc < 2:3996397/93‑1 (MQ=255)
cggggtgtTTTTTCTG.CGCG.AAAATGCGCCAGGGGGGTGGGGGGGTGTGAAC..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCg < 1:700666/97‑1 (MQ=255)
cTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGttttagat > 2:2614883/1‑97 (MQ=255)
gctttttttttTGT.GGAA.AAAAGCCGCCGGGGGGGTGGGGGGGTGTAAAC..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGc < 2:3171133/96‑1 (MQ=255)
cGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGcc > 2:3198691/1‑101 (MQ=255)
gtgtTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGCTTTCCCCGccc > 1:684284/1‑101 (MQ=255)
ggtTTTTTCTG.GGGA.AAAATCGGCCCGGGGGGGGGGGGGGAGACACC..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCt < 1:1134190/100‑1 (MQ=255)
gtTTTTTCTT.GGTG.AAAATGCGCCACGGGGGCGCGGGGGTGTGAAG..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCtt < 2:636216/101‑1 (MQ=255)
ttttttCTT.GGTA.AAAATACGCCAGGGGGGTGGGGGGGTGTGAAC..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCttt < 2:397212/101‑1 (MQ=255)
tttttCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCtttt > 1:3720249/1‑101 (MQ=255)
tttttCTG.GGTA.AAAATCCGCCAGGGGGGTGGGGGGTGGTGAAC..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCtttt < 2:4234329/101‑1 (MQ=255)
tgtt.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCtt > 1:2810268/3‑101 (MQ=255)
cTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCttt > 2:3388510/1‑101 (MQ=255)
cTT.GGTG.AAAAGCCGCCAGGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCttt < 2:2847342/101‑1 (MQ=255)
tt.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTg > 2:4071376/1‑101 (MQ=255)
tt.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GATTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTg > 2:3089792/1‑101 (MQ=255)
tt.GGTG.AAAATACGCCACGGGGGGGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGACAGGGCCGGGGTTTTCCCGGCCCTTATTCTTTg > 1:729990/1‑101 (MQ=38)
gtgg.AAAATACGCCAGGGGGGTGGGGGGGTGTGAAC..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGc < 2:2693061/98‑1 (MQ=255)
ggTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGc > 1:1010455/1‑101 (MQ=255)
ggTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGc > 2:2070771/1‑101 (MQ=255)
ggTA.AAAATCCGCCGGGGGGGGGGGGGGGTGTGAAC..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGc < 2:120015/101‑1 (MQ=255)
gTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGcc > 1:1671271/1‑101 (MQ=255)
tG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAT..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCg < 1:520563/101‑1 (MQ=255)
g.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTgagatc > 1:980922/1‑96 (MQ=255)
aaaaTACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCggg > 2:2957874/1‑101 (MQ=255)
aaaacggcgcgggggggggggggtgTGGAA..CCCCCCGGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCggg < 2:1621995/92‑1 (MQ=255)
aTACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGcc > 1:1847047/1‑101 (MQ=255)
cACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgggc > 2:1812051/1‑101 (MQ=255)
gggggggggggggggggTGAACCCCCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTggg < 1:2731375/99‑1 (MQ=255)
aCGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgggcc > 1:3880567/1‑101 (MQ=255)
cgggggtgcgggggtgTGAAC..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgggccg < 1:1324956/101‑1 (MQ=255)
gggggtgggggggtgGGAAC..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgggccgg < 1:2795041/101‑1 (MQ=255)
gggggtgcgggggtgTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgggccgg > 1:532269/1‑101 (MQ=255)
gggggggtgTGAAC..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCcgcg < 1:846151/99‑1 (MQ=255)
gcgggggtgTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCcgcg > 1:4215751/1‑101 (MQ=255)
cgggggtgTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCcgcgc > 1:3271842/1‑100 (MQ=255)
gggggagTGAAA..CCCCC..GCTTCTGCCGCGGCAATCTGGTCGAAAGGGTCGGGGTTTTCCCCGCCCTTTTTCTTTGGCCGGGGCCTCGGGCTGCGCCGcaac > 2:601902/1‑101 (MQ=255)
gggtgTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGcgacga > 2:319314/1‑101 (MQ=255)
gttgtaAAC..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACgag < 1:1077685/99‑1 (MQ=255)
gttgtaAAC..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACgag < 2:2348085/99‑1 (MQ=255)
ggtgTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACgag > 2:3850202/1‑101 (MQ=255)
ggtgTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACgag > 2:3509376/1‑101 (MQ=255)
ggggggAAC..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACgag < 1:317716/96‑1 (MQ=255)
gtgtGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACgagg < 2:1276012/101‑1 (MQ=255)
tgtgAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACgagga > 1:3294553/1‑101 (MQ=255)
gtgAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACgaggag > 1:3223058/1‑101 (MQ=255)
aaa..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACGAGGAGAAc > 2:2873876/1‑101 (MQ=255)
aa..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACGAGGAGAACg > 2:1925930/1‑101 (MQ=255)
a..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACGAGGAGAACgg > 1:3216066/1‑101 (MQ=255)
|
AGGTGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAA.GCTGCGTGTTTTTTCTT.GGTG.AAAATACGCCACGGGGGTGCGGGGGTGTGAAA..CCCCC..GCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACGAGGAGAACGG > NC_014034/1820293‑1820493
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 26 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|