| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,367 | +T | 1.7% | intergenic (‑163/‑142) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,367 | 1 | .→T | 1.7% | 4.5 ‑1.4 ‑0.8 | 177 | intergenic (‑163/‑142) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (3/0): ref base (87/87): total (90/87) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.46e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.54e-01 | ||||||||||
Only 100 of 199 total aligned reads displayed.
GAAGGGGGCTCTG.CCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CG.C.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATA > NC_014034/2249268‑2249466
|
gaagGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGaa < 2:911974/101‑1 (MQ=255)
gaagGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGaa > 2:3752254/1‑101 (MQ=255)
aagGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.t > 2:954070/1‑101 (MQ=255)
agGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.Tg > 2:1251327/1‑101 (MQ=255)
gggCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGgcg < 1:2264758/101‑1 (MQ=255)
gggCTCTGCCCCCGTCCCGTGACGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGgcg > 2:1753689/1‑101 (MQ=255)
gCTCTGCCCCCGTCCCTTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCa < 2:1105257/101‑1 (MQ=255)
ctctGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..g < 1:106933/101‑1 (MQ=255)
ctctGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..g < 1:1238753/101‑1 (MQ=255)
ctgcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..Gcc < 1:1853884/97‑1 (MQ=255)
gcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCag > 2:1915529/3‑101 (MQ=255)
gcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGGGAA.TGGCGCA..GCCag > 1:2243123/3‑101 (MQ=255)
cccgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAgg > 1:4129767/1‑101 (MQ=255)
ccgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAggg < 2:2269323/101‑1 (MQ=255)
cgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAgggg > 2:3683041/1‑101 (MQ=255)
cgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAgggg > 1:833390/1‑101 (MQ=255)
ccgatctcGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGc < 2:425147/94‑1 (MQ=255)
ccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCa < 1:560713/101‑1 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.g < 2:24645/101‑1 (MQ=255)
cgcaagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGCGAA..GCCAGAggggg > 2:2990221/8‑101 (MQ=18)
gtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.g.c < 2:1711979/101‑1 (MQ=255)
gtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.g.c > 2:1123088/1‑101 (MQ=255)
gtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.g.c > 2:4053323/1‑101 (MQ=255)
gtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.g.c < 1:1001720/101‑1 (MQ=255)
caagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGCGAA..GCCAGAggggggg > 2:882955/6‑100 (MQ=18)
gCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.g.cg.c > 1:3537406/1‑101 (MQ=255)
cGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CG.c.cc > 1:995632/1‑101 (MQ=255)
cGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CG.c.cc > 1:1918090/1‑101 (MQ=255)
cGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CG.c.cc > 1:2850463/1‑101 (MQ=255)
gACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CG.c.ccccc < 2:3593020/101‑2 (MQ=255)
aCT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGTGGGGCA.G.CG.c.ccccct < 2:4129505/101‑3 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CG.c.cccccttc > 1:1710117/1‑97 (MQ=255)
t.CCCCCGAGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CG.c.cccccttc > 2:1624239/1‑97 (MQ=255)
ccccccGGGTTTTTTGGGGGAAGAGGAA...GGGG..GGTTTTCATTTTGCCAAAAAAATCCCGGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CG.c.ccccctt < 1:1422384/100‑4 (MQ=21)
ccccccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CG.c.cccccttc < 2:2892488/100‑5 (MQ=255)
cccccGGGATATTTGAGGCAAGAGGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CG.c.cccccttcg < 2:450745/101‑6 (MQ=255)
ccccGGGATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC..AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCA.G.CG.C.CCCCtg > 2:1635175/1‑100 (MQ=0)
ccccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTcgc < 1:811842/101‑1 (MQ=255)
ccccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTcgc < 1:1547977/101‑1 (MQ=255)
cccGGGATATTTGCAGCAAGGTGAAACCGGTT..GCCTTTCATCTGGCCCGAAATATCCC.GGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCA.G.CG.c.cctcctgc < 1:291216/101‑7 (MQ=14)
cccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTcgcg < 2:3190971/101‑1 (MQ=255)
cccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAAGATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTcgcg > 1:3579042/1‑101 (MQ=255)
cGGGATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGAGAAT.TGGCCAAAGGCCAAGAGGGGGCA.G.CG.C.CCCCtgacc > 2:1879142/1‑97 (MQ=2)
cGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCgcggg > 1:433227/1‑101 (MQ=255)
cGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCgcggg > 1:2366116/1‑101 (MQ=255)
cGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCgcggg < 2:3162182/101‑1 (MQ=255)
gggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCG.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCgcgggc < 2:2916758/101‑1 (MQ=255)
gggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCgcgggc > 1:1763632/1‑101 (MQ=255)
gggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCgcgggc < 2:410638/101‑1 (MQ=255)
tatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGcc > 2:1689121/1‑101 (MQ=255)
atTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCcg > 1:3698587/1‑101 (MQ=255)
gAGGCAAGATGAA...GGGG..GTCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGAc < 2:1972989/101‑1 (MQ=255)
aGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGAcg > 2:3897094/1‑101 (MQ=255)
ggCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGAcgc > 1:910587/1‑101 (MQ=255)
ggCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGAcgc > 2:370932/1‑101 (MQ=255)
aaGAGGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGAcgcgcg < 1:2440432/101‑1 (MQ=255)
aGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACgcgcgc > 1:4232831/1‑101 (MQ=255)
tGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGcgccgc > 2:3799270/1‑101 (MQ=255)
gAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCa > 1:735256/1‑101 (MQ=255)
gAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCa < 2:3521903/101‑1 (MQ=255)
gAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCa < 1:1461113/101‑1 (MQ=255)
aa...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCaa > 2:2817288/1‑101 (MQ=255)
a...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 1:1899413/101‑1 (MQ=255)
a...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 2:1817901/101‑1 (MQ=255)
ggggg..ggTTTTCTTCTTGCGAAAAATTCCGG.GGGGGGTAAA.TGGCGCG..GCCGGGGGGGGGCG.GCCC.C.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 1:3132242/100‑1 (MQ=255)
gggg..ggCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACa > 2:1269296/1‑101 (MQ=255)
gggg..ggCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGAGAA..GCCAGAGGGGGGCA.G.CG.CACGCCTTCGCGGGCGGGCGGGAAGCGcgccgccaaa > 2:4008941/1‑97 (MQ=25)
ggg..ggCTTTCATCTTGCCGAAAATATCCG.GGGGGGTGAA.TGGCTCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAg < 1:382674/101‑1 (MQ=37)
ggg..ggCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCCACAg > 2:1053412/1‑101 (MQ=255)
ggCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTc < 2:2028296/101‑1 (MQ=255)
ggCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTc > 2:2568943/1‑101 (MQ=255)
gCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCg < 1:3207496/101‑1 (MQ=255)
gCTTTCATCTTGCCGAAAATATCCC.GGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCg < 1:3527858/101‑1 (MQ=255)
tttCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg > 1:1186225/1‑101 (MQ=255)
tCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTTGTGcc > 2:2107527/1‑101 (MQ=255)
tCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcc > 1:2272169/1‑101 (MQ=255)
cATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGccc < 1:2527817/101‑1 (MQ=255)
cATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGccc < 2:136097/101‑1 (MQ=255)
tCTTGCCGAAAATATCCG.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCt < 1:2631767/101‑1 (MQ=255)
ttGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCGGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCTCCttt < 2:1677557/101‑1 (MQ=37)
ttGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCttt < 1:1265657/101‑1 (MQ=255)
tGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTg > 1:1651336/1‑101 (MQ=255)
tGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTg > 1:2210826/1‑101 (MQ=255)
tGCCAAAAATATCCG.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTg < 2:2924812/101‑1 (MQ=38)
gCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGt > 2:3357811/1‑101 (MQ=255)
ccGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTc > 1:3153813/1‑101 (MQ=255)
aaaaTATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGGGCCCCTTTGTCAtt > 1:1053140/1‑101 (MQ=255)
aaaTATCCC.GGGGGGTGAA.TGGCGCA..GCCAGGGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTc < 1:3785762/101‑1 (MQ=255)
ggggggTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAcc < 1:208656/101‑1 (MQ=255)
ggggTGAA.TGGCGCA..GCCAGAGGGGGCCACC.CC.C.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCa < 2:514208/101‑1 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 1:3355792/1‑101 (MQ=255)
ggTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATg < 2:3299626/101‑1 (MQ=255)
ggTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATg < 2:602448/101‑1 (MQ=255)
gTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGt > 2:148543/1‑101 (MQ=255)
gTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGt < 1:3028008/101‑1 (MQ=255)
gTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGt < 1:2610610/101‑1 (MQ=255)
tGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTc > 1:1124005/1‑101 (MQ=255)
gAA.GGGCGCA..GCCAGGGGGGGGCA.GCCC.C.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCa < 1:3683295/101‑1 (MQ=255)
aa.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt > 1:779448/1‑101 (MQ=255)
a.TGGCGCA..GCCAGAGGGGGGCA.G.CGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa < 1:3246538/101‑1 (MQ=255)
|
GAAGGGGGCTCTG.CCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.G.CG.C.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATA > NC_014034/2249268‑2249466
Base quality scores:
ATCG
< 3 ≤
ATCG
< 17 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|