| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,391 | +C | 94.4% | intergenic (‑187/‑118) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,391 | 1 | .→C | 94.4% | 17.4 ‑0.3 ‑0.2 | 143 | intergenic (‑187/‑118) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (62/73): ref base (3/5): total (65/78) | ||||||||||
| Fisher's exact test strand distribution p-value = 7.28e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.80e-01 | ||||||||||
Only 100 of 174 total aligned reads displayed.
TGCCGGGACTCCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCG.C.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATGTCC > NC_014034/2249291‑2249486
|
gCCGGGACTCCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.gcg.c > 1:3537406/1‑101 (MQ=255)
cGGGACTCCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCG.c.c.c > 1:2850463/1‑101 (MQ=255)
cGGGACTCCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCG.c.c.c > 1:995632/1‑101 (MQ=255)
gggctccccccGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCC.GGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCA.gcg.c < 1:3059470/95‑1 (MQ=17)
ggACTCCCCCGGGATATTTGAGGCAAGATGAC...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCG.c.c.ccc > 1:3808942/1‑101 (MQ=255)
tCCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCG.c.c.ccccttc > 1:1710117/1‑97 (MQ=255)
ccccccGGGTTTTTTGGGGGAAGAGGAA...GGGG..GGTTTTCATTTTGCCAAAAAAATCCCGGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCG.c.c.cccctt < 1:1422384/100‑4 (MQ=21)
cccccGGGATATTTGAGGCAAGAGGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCG.c.c.ccccttcg < 2:450745/101‑6 (MQ=255)
ccccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.cgc < 1:1547977/101‑1 (MQ=255)
ccccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.cgc < 2:1633285/101‑1 (MQ=255)
ccccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.cgc > 1:2354331/1‑101 (MQ=255)
cccGGGATATTTGCAGCAAGGTGAAACCGGTT..GCCTTTCATCTGGCCCGAAATATCCC.GGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCA.GCG.c.c.ctcctgc < 1:291216/101‑7 (MQ=14)
cccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAAGATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.cgcg > 1:3579042/1‑101 (MQ=255)
ccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.Cgcgg > 1:82437/1‑101 (MQ=255)
cGGGATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGAGAAT.TGGCCAAAGGCCAAGAGGGGGCA.GCG.C.C.CCCtgacc > 2:1879142/1‑97 (MQ=2)
cGGGATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC..AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCA.GCG.C.C.CCCtgccc > 2:1663196/1‑97 (MQ=0)
cGGGATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC..AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCA.GCG.C.C.CCCtgccc > 2:1996119/1‑97 (MQ=2)
cGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.Cgcggg > 1:636164/1‑101 (MQ=255)
cGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.Cgcggg < 2:3162182/101‑1 (MQ=255)
gggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCG.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.Cgcgggc < 2:2916758/101‑1 (MQ=255)
gggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.Cgcgggc < 2:410638/101‑1 (MQ=255)
gggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.Cgcgggc > 1:1763632/1‑101 (MQ=255)
ggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.Cgcgggcg < 2:2533023/101‑1 (MQ=255)
atTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCcg > 1:3698587/1‑101 (MQ=255)
ttGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGGGGGGGGCA.GCGCC.C.CCCTT.CGCGGCCGGCcgcg > 2:1268224/1‑101 (MQ=37)
aGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGAcg > 2:3897094/1‑101 (MQ=255)
ggCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGAcgc > 1:910587/1‑101 (MQ=255)
cAAGATGAA...GGGG..GGCTTTCATCTTGCCGAGAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGAcgcgc > 1:3765924/1‑101 (MQ=255)
aaGATGAG...GGGG..GGCTTTCATCTTGCCGAAAATAGCGC.GGGGGGTGAA.TGGCGCA..GCGAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGAcgcgcg < 2:1066977/101‑1 (MQ=37)
aaGAGGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGAcgcgcg < 1:2440432/101‑1 (MQ=255)
aGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACgcgcgc > 2:1588134/1‑101 (MQ=255)
aGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACgcgcgc > 1:4232831/1‑101 (MQ=255)
aTGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGcgccg > 2:3618452/1‑101 (MQ=255)
tGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGcgccgc > 2:3799270/1‑101 (MQ=255)
a...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAAc < 2:1817901/101‑1 (MQ=255)
gggg..ggCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGAGAA..GCCAGAGGGGGGCA.GCG.CAC.GCCTT.CGCGGGCGGGCGGGAAGCGcgccgccaaa > 2:4008941/1‑97 (MQ=25)
ggg..ggCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCCACAg > 2:1053412/1‑101 (MQ=255)
tttCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg > 1:1186225/1‑101 (MQ=255)
tttCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg < 1:1915655/101‑1 (MQ=255)
ttCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGAGCA..GCCAGAGGGGGGCA.GCG.C.CACCCTC.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGGCGTGc > 1:1510896/1‑101 (MQ=37)
tCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTTGTGcc > 2:2107527/1‑101 (MQ=255)
cATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGccc < 2:136097/101‑1 (MQ=255)
cATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGccc < 2:3179523/101‑1 (MQ=255)
tCTTGCCGAAAATATCCG.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCt < 1:2631767/101‑1 (MQ=255)
tCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCt < 2:2302495/101‑1 (MQ=255)
cTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt < 1:3529238/101‑1 (MQ=255)
cTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGCCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt > 1:2265057/1‑101 (MQ=255)
ttGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCGGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCTCCttt < 2:1677557/101‑1 (MQ=37)
ttGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCttt < 1:1265657/101‑1 (MQ=255)
tggcGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTg > 1:2420108/4‑101 (MQ=255)
tGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTg > 1:1651336/1‑101 (MQ=255)
tGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTg > 2:2885210/1‑101 (MQ=255)
tGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTg > 1:2210826/1‑101 (MQ=255)
tGCCAAAAATATCCG.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTg < 2:2924812/101‑1 (MQ=38)
gCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGt > 2:3357811/1‑101 (MQ=255)
ccGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTc > 1:3153813/1‑101 (MQ=255)
aaaaTATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGGGCCCCTTTGTCAtt > 1:1053140/1‑101 (MQ=255)
atatCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCNTNCtn > 1:1058683/1‑100 (MQ=255)
ttCCG.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTc < 1:3364653/100‑1 (MQ=255)
cc.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCa < 1:4053584/101‑1 (MQ=255)
cc.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGGGCCCCTTTGTCATTCTGTCGCa > 1:3286465/1‑101 (MQ=255)
c.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAc < 2:2787310/101‑1 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc < 2:1917964/101‑1 (MQ=255)
gggggTAAA.GGGCGCA..GCCGGGGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc < 2:3553598/101‑1 (MQ=255)
ggggTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCa > 2:3715464/1‑101 (MQ=255)
ggggTGAA.TGGCGCA..GCCAGAGGGGGCCACCCC.C.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCa < 2:514208/101‑1 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt < 2:982947/101‑1 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 1:1931481/1‑101 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt < 2:1706323/101‑1 (MQ=255)
ggTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATg < 2:602448/101‑1 (MQ=255)
ggTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATg < 2:3299626/101‑1 (MQ=255)
gTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGt < 1:3028008/101‑1 (MQ=255)
tGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTc > 1:1124005/1‑101 (MQ=255)
tGAA.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTc > 2:1436569/1‑101 (MQ=255)
ttccgatctcA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTc < 2:4117340/92‑1 (MQ=255)
aa.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt > 1:779448/1‑101 (MQ=255)
a.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa > 1:1882425/1‑101 (MQ=255)
a.TGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa < 1:3246538/101‑1 (MQ=255)
tGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa < 2:3818028/101‑1 (MQ=255)
tGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa < 2:289922/101‑1 (MQ=255)
tGGCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa < 1:675004/101‑1 (MQ=255)
ggCGCA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAg < 2:1882305/101‑1 (MQ=255)
cgcA..GCCAGAGGGGGGGA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGATCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCt > 2:1289080/1‑101 (MQ=255)
cgcA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCt < 1:2475575/101‑1 (MQ=255)
gcA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTg < 1:1251423/101‑1 (MQ=255)
cA..GCCAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTgg < 2:2768367/101‑1 (MQ=255)
cAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGc > 1:2576725/1‑101 (MQ=255)
cAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGc > 1:3135784/1‑101 (MQ=255)
cAGAGGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGCCATTCTGTCGCACCCATGTCATAAGCTGGCCGc > 2:2037613/1‑101 (MQ=255)
agagGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCa > 1:3947271/1‑101 (MQ=255)
ggggggcCA.CCC.C.C.CCCTTCCGGGGGCGCCCGCGCCGCGCGCCGAAACAGGTCGTCCCCCTTTGTCATTCTGTCGCCCCCATGTCATAAGCTGGCCGCATc < 2:421156/100‑1 (MQ=255)
agGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGCCGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATc > 1:738113/1‑101 (MQ=255)
agGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATc < 1:4102452/101‑1 (MQ=255)
agGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATc > 1:2171786/1‑101 (MQ=255)
agGGGGGCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATc < 1:334245/101‑1 (MQ=255)
ggggCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGAt < 1:484674/101‑1 (MQ=255)
ggggCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGAt < 1:3752511/101‑1 (MQ=255)
gCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATGTc > 2:2990073/1‑101 (MQ=255)
gCA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATGTc < 2:84115/101‑1 (MQ=255)
cA.GCGCC.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATGTcc < 2:3537153/101‑1 (MQ=255)
|
TGCCGGGACTCCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCA.GCG.C.C.CCCTT.CGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATGTCC > NC_014034/2249291‑2249486
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|