| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,566,551 | +T | 3.3% | intergenic (+23/+171) | purD → / ← sdaA | phosphoribosylamine‑‑glycine ligase/L‑serine ammonia‑lyase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,566,551 | 1 | .→T | 3.3% | 8.7 0.0 0.0 | 121 | intergenic (+23/+171) | purD/sdaA | phosphoribosylamine‑‑glycine ligase/L‑serine ammonia‑lyase |
| Reads supporting (aligned to +/- strand): new base (1/3): ref base (28/89): total (29/92) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 137 total aligned reads displayed.
GCGCCTATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAAC.GGG.GGCGCTGCCCCC.CTC.CT.G..CTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCC > NC_014034/2566452‑2566644
|
tccTAGGCGATGGTCGATGCGTTCGACGGGCCTGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCc.ct < 2:585315/100‑1 (MQ=255)
gcCTATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCc.ct < 2:846157/101‑1 (MQ=255)
ccTATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCc.ctc < 2:878730/101‑1 (MQ=255)
tATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGGGCTGCCCCc.ccc.ct > 1:1789161/1‑101 (MQ=255)
aTGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.g < 1:2279289/101‑1 (MQ=255)
gCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.ggc < 1:3437533/101‑3 (MQ=255)
cGATGGTCGATGCCATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.ggcc < 2:2937542/101‑4 (MQ=38)
gATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.ggcct < 1:1058341/101‑5 (MQ=39)
gATGCGCTCGGCTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCa < 1:705356/101‑1 (MQ=25)
gATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCa < 2:2743559/101‑1 (MQ=37)
tGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAAt < 2:3129681/101‑1 (MQ=37)
gCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAAtt < 1:3672165/101‑1 (MQ=37)
gCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TA.GGCCTTC.GGCCAAtt < 1:3566316/101‑1 (MQ=37)
cGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTc < 1:2286059/101‑1 (MQ=37)
tCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.cc < 1:486815/101‑1 (MQ=37)
tCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CCC.TT.GGCCCTC.GGCCAATTCC.cc > 1:2553452/1‑101 (MQ=25)
cGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.ccc < 2:659481/101‑1 (MQ=37)
gcgggCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.ccccc < 2:2391411/98‑1 (MQ=25)
ccTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.ccccc < 2:203294/100‑1 (MQ=25)
aCTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.ccccc < 1:1187826/101‑1 (MQ=25)
cTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.cccccc < 2:2895798/101‑1 (MQ=25)
tGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCg < 1:2181231/101‑1 (MQ=25)
ggCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCgg < 1:2944444/101‑1 (MQ=25)
ggCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCgg < 1:503621/101‑1 (MQ=25)
ggCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCgg < 1:1099121/101‑1 (MQ=25)
gCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAAC.GGGTGGGGCTGCCCCC.CTC.TT.GGCCCTC.CGCCAATTCA.CCCCCCcgg > 2:3490303/1‑101 (MQ=25)
cccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGa < 1:1829286/101‑1 (MQ=25)
ccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGGGCCGCCCCC.CCCTTT.GC.CTTC.GGCCAAATCA.CCCCCCcggga > 1:1978096/1‑99 (MQ=255)
ccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGat < 2:2168907/101‑1 (MQ=25)
ccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGat < 1:3194193/101‑1 (MQ=25)
ccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGat < 2:4180170/101‑1 (MQ=25)
cGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGGGCTGCCCCC.CCC.TT.GGCCTTC.CGCCAAATCC.CCCCCCCGGgta > 2:3168341/1‑101 (MQ=255)
cGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGata < 1:1708987/101‑1 (MQ=25)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCCGGatat > 1:2119448/1‑101 (MQ=25)
aGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.ACCCCCGGGATAtt > 2:1052333/1‑101 (MQ=21)
ggggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATAttt < 2:77585/101‑1 (MQ=21)
ggggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATAttt < 1:1697153/101‑1 (MQ=21)
tCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCCATTAA.ACCCCCCGGATATTTTgggg > 2:1592017/1‑100 (MQ=21)
tCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGc < 1:1268244/101‑1 (MQ=21)
tCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGc < 2:229061/101‑1 (MQ=21)
cTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCCGGCTATTTCGGGCa > 2:861613/1‑101 (MQ=21)
tGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAGCGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCaa < 1:473092/101‑1 (MQ=21)
tGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CCC.TT.GGCCTTC.GGCCAATTCA.CCCCCCCGGAGAtttttggcca > 2:3957956/1‑94 (MQ=18)
cgccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGGGCTGGCCCC.CTC.TT.GGCCTTT.CGCCAATTCA.CCCCCCCGGACATTTCGGGCAAGaa > 1:3980246/1‑100 (MQ=255)
cgccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGAt < 2:2060072/101‑1 (MQ=21)
cgccgcGACATCGGCGGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGAt < 2:523134/101‑1 (MQ=21)
gccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATa < 2:2066625/101‑1 (MQ=21)
gccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATa < 2:3108432/101‑1 (MQ=21)
cgcgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCCATTCA.CCCCCCCGGATATTTCGGGCAAGATaaa > 1:3906941/1‑101 (MQ=21)
gcgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAaag < 1:430223/101‑1 (MQ=21)
cgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAaaga < 1:1811536/101‑1 (MQ=21)
cgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAaaga > 2:3176725/1‑101 (MQ=21)
gACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAaagaa < 1:19493/101‑1 (MQ=21)
aCATCGGCTGGCGCTCGCTCTGAGACGAAACGGGG.GGCCCCGCCCCC.CTT.TTGG..CCTCGGGCCAATTCA.CCCCCCGCGCCGTTTCGGGGGCGATAaaaaag > 1:4115095/1‑101 (MQ=9)
aTCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCCATTCA.CCCCCCCGGAAATTTTGGGGAAGATAAAGAAggg > 2:3039499/1‑100 (MQ=18)
tCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTc > 1:3848117/1‑101 (MQ=21)
ggCTGGGGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtt < 1:3073594/101‑1 (MQ=21)
ggCTGGCGCGCCCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtt < 1:1943026/101‑1 (MQ=21)
gCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCttt < 2:1078597/101‑1 (MQ=21)
cTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtttt < 1:2169706/101‑1 (MQ=21)
tGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTc > 2:1009588/1‑101 (MQ=21)
tGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTc < 1:3248456/101‑1 (MQ=21)
gcgcgcgcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCt < 1:3376059/101‑1 (MQ=21)
gcgcgcgcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCt < 1:3727302/101‑1 (MQ=21)
cgcgcgcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCtt < 1:2512408/101‑1 (MQ=21)
cgcgcgcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCtt < 1:1533020/101‑1 (MQ=21)
cgcgcgcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCtt < 2:3626458/101‑1 (MQ=21)
gcgcgcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCC.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt < 2:823803/101‑1 (MQ=21)
gcgcgcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt < 2:2428260/101‑1 (MQ=21)
gcgcgcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt < 2:1830164/101‑1 (MQ=21)
gcgcTCTGAGGCGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCa < 1:2096435/101‑1 (MQ=21)
cgcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCAt < 1:4145111/101‑1 (MQ=21)
gcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATc < 1:22833/101‑1 (MQ=21)
gcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATc < 1:31132/101‑1 (MQ=21)
tctGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCtt < 1:1173596/101‑1 (MQ=21)
ctGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTg < 1:569431/101‑1 (MQ=21)
tGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGc > 2:2272230/1‑101 (MQ=21)
gagaCGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGcc > 1:1222553/1‑101 (MQ=21)
gagaCGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGcc > 2:1826958/1‑101 (MQ=21)
gagaCGAAACAGGG.GGCGCTACCCCC.CTC.TT.GGCCTTC.GGCCAATTCC.CCCCCCGGAATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGcc < 1:3307486/101‑1 (MQ=21)
cGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaa > 2:3077751/1‑101 (MQ=21)
cGAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaa < 1:3404108/101‑1 (MQ=21)
gAAACGGGG.GGCGCTGCTCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaaa < 2:3806296/101‑1 (MQ=21)
gAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaaa < 2:2702264/101‑1 (MQ=21)
gAAACGGGG.GGCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaaa < 2:1593263/101‑1 (MQ=21)
aacgggg.ggCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCACCCCCCCGGGAAATTT.GGGCCAGAAAAAGAAAGGCTTTTTCTTTCATCTTTcccccaaaa > 1:2185736/5‑95 (MQ=2)
aacgggg.ggCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAata < 1:3581109/97‑1 (MQ=25)
acgggg.ggCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAatat < 2:4156408/98‑1 (MQ=25)
cgggg.ggCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATc < 2:1120311/99‑1 (MQ=25)
cgggg.ggCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATc < 2:4015211/99‑1 (MQ=25)
gggg.ggCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATcc < 2:1571825/100‑1 (MQ=25)
gggg.ggCGCTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATcc < 1:949433/100‑1 (MQ=25)
gg.ggCGCTGCCCCCTCTT.GG.C..CTTT.GGCCAATTCA..CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCgggggga < 1:3959563/101‑3 (MQ=2)
g.ggCGCTGCCCCCTCTT.GG.C..CTTT.GGCCAATTCA..CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggggag > 1:601326/1‑98 (MQ=2)
g.ggCGCTG.CCCC.CTC.TT.GGCCTTT.GGCCAATTCA..CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggggag > 1:1254032/1‑98 (MQ=2)
ggCGCTGCCCCCTCTT.GG.C..CTTT.GGCCAATTCA..CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggggagc < 1:1048067/101‑5 (MQ=2)
ggCGCTGCCCCCTCTT.GG.C..CTTT.GGCCAATTCA..CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggggagc < 1:2334609/101‑5 (MQ=2)
cgcTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCCAAATATCCCggggg > 2:3022218/1‑101 (MQ=25)
gcTGCCCCC.CTC.TT.GGCCTTC.GGCCAATTCT.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGa < 1:2866857/101‑1 (MQ=37)
ccgCCCCC.CTC.TT.GGCCTTC.GGCCAAGTCC.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAg < 2:3568447/99‑1 (MQ=37)
|
GCGCCTATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAAC.GGG.GGCGCTGCCCCC.CTC.CT.G..CTTC.GGCCAATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCC > NC_014034/2566452‑2566644
Base quality scores:
ATCG
< 3 ≤
ATCG
< 17 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|