BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	2,640,160	+C	100%	intergenic (‑136/+140)	thrS ← / ← RCAP_rcc02462	threonyl‑tRNA synthetase/hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	2,640,160	1	.→C	100.0%	308.4	102	intergenic (‑136/+140)	thrS/RCAP_rcc02462	threonyl‑tRNA synthetase/hypothetical protein
Reads supporting (aligned to +/- strand): new base (30/71): ref base (0/1): total (30/72)

Only 100 of 118 total aligned reads displayed.


GGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGG.CTTC.GGCCAATT.CGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGAC  >  NC_014034/2640062‑2640255


ggTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGG.cc                                                                                                 <  2:1619991/101‑2 (MQ=255)


   tGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGG.ccttc                                                                                              <  1:3787326/101‑5 (MQ=255)


    gCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGG.ccttcg                                                                                             <  2:3513082/101‑6 (MQ=255)


    gCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGG.ccttcg                                                                                             <  2:3731326/101‑6 (MQ=255)


     cGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.gg                                                                                            <  2:3615035/101‑1 (MQ=255)


       ggTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGcc                                                                                          <  2:3097506/101‑1 (MQ=255)


        gTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCa                                                                                         <  1:2674748/101‑1 (MQ=255)


        gTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCa                                                                                         <  2:3780453/101‑1 (MQ=255)


          tATGATGCTCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAAt                                                                                       <  2:3765055/101‑1 (MQ=255)


          tATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAAt                                                                                       <  2:2769921/101‑1 (MQ=255)


            tgatgCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.c                                                                                    <  1:3856135/101‑1 (MQ=255)


                gcgcCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CAccc                                                                                <  1:301120/101‑1 (MQ=255)


                  gcCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CAccccc                                                                              <  1:2836532/101‑1 (MQ=255)


                   ccGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CAcccccc                                                                             <  1:3982839/101‑1 (MQ=255)


                    cGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCg                                                                            <  1:1320029/101‑1 (MQ=255)


                     gggTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGa                                                                           <  2:2484439/101‑1 (MQ=255)


                      ggTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAg                                                                          <  1:667616/101‑1 (MQ=255)


                         aTGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAAGGGGGGGCTGCCCCCCCCC.TTGC.CCTCGGGCCAATT.CCcccccccggga                                                                        >  1:3330557/1‑96 (MQ=255)


                          tGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCCATT.CACCCCCCGAGGGAt                                                                      >  2:1279984/1‑101 (MQ=37)


                          tGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTAt                                                                      <  2:1988366/101‑1 (MQ=255)


                          tGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTAt                                                                      <  2:3161143/101‑1 (MQ=255)


                          tGCGACGCGGCGGAAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTAt                                                                      <  2:3843433/101‑1 (MQ=37)


                           tcGACGAGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CCCCCCCCGAGGTAtt                                                                     <  2:585320/100‑1 (MQ=25)


                           gCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTAtt                                                                     <  2:3669146/101‑1 (MQ=255)


                            cGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTAttt                                                                    <  2:2418875/101‑1 (MQ=255)


                            cGACGCGGCGGCAGGCGTGTCAACCGGGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTAttt                                                                    <  1:820020/101‑1 (MQ=25)


                             gACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTg                                                                   <  1:663839/101‑1 (MQ=255)


                             gACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTg                                                                   <  2:2452333/101‑1 (MQ=255)


                              aCGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTgg                                                                  <  2:2249054/101‑1 (MQ=255)


                              aCGCGGCGGCAGGCGTGTCAACCGTGCCGCGTTGGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CCCCCCCCGAGGTATTTgg                                                                  <  1:3925569/101‑1 (MQ=25)


                               cgcgGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGa                                                                 <  1:3522607/101‑1 (MQ=255)


                                gcggcgGGGGGCGTTTCGACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGGTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGag                                                                <  1:1345409/101‑2 (MQ=21)


                                gcggcgGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CGCCCCCCGAGGTATTTGGag                                                                <  1:1966406/101‑2 (MQ=255)


                                 cggcggCAGGCGTGTCAACCGGGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGagc                                                               <  1:758480/101‑3 (MQ=25)


                                  ggcggcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCa                                                              <  2:2035462/101‑1 (MQ=37)


                                  ggcggcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCa                                                              <  2:816660/101‑1 (MQ=37)


                                  ggcggcAGGCGTGTCAACCGTGGCGCTTTTGCGAAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCa                                                              <  1:3662671/101‑1 (MQ=25)


                                     ggcAGGCGTGTCAACCGTGGCGCTTTGGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGa                                                           <  2:694869/101‑1 (MQ=25)


                                        aGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CCCCCCCCGAGGTATTTGGAGCAATATGa                                                        <  2:4096019/101‑1 (MQ=25)


                                         ggggttccacccGTGGCACTTTTGCCAAGGC.AAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATGaaa                                                      <  2:3804816/91‑1 (MQ=17)


                                         ggCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATGaa                                                       <  1:1203772/101‑1 (MQ=25)


                                          gCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATGaaa                                                      <  2:3662876/101‑1 (MQ=25)


                                           cGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATGaaag                                                     <  1:1732739/101‑2 (MQ=25)


                                              gtCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATGaaagacc                                                  <  2:4056931/101‑5 (MQ=21)


                                                 aaCCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATg                                              <  2:2487968/101‑1 (MQ=21)


                                                 aaCCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATg                                              <  1:3137833/101‑1 (MQ=25)


                                                   ccGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.TGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATggg                                            <  2:3662767/101‑1 (MQ=25)


                                                   ccGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATggg                                            <  1:1451997/101‑1 (MQ=25)


                                                        gcgcTTCTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCAt                                       <  1:685582/101‑1 (MQ=21)


                                                           cTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCtt                                    <  1:3089224/101‑1 (MQ=21)


                                                               tGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCt                                <  1:3837973/101‑1 (MQ=21)


                                                                gcgcAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTc                               <  1:251102/101‑1 (MQ=25)


                                                                 cgcAGGCAAAAGGGGGGGGCGG.CCCCCCCCTTTGGCCTTC.GGCCAATTACCCCCCCCGGGGT.TTTGG.GGAAGAAGAAAAAACAAGGGGTT.ATCTTTCCTCa                              >  2:1067304/1‑101 (MQ=255)


                                                                 cgcAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCa                              <  1:925952/101‑1 (MQ=25)


                                                                   gccccgaaaAGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAat                           >  1:1398393/7‑101 (MQ=14)


                                                                   cAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCaaa                            <  2:1433926/101‑1 (MQ=25)


                                                                    ccccgaaaAGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGCGAAAGGA..TGGGGTTTATCTTGCCCCAAata                          >  2:723395/6‑101 (MQ=9)


                                                                     ggCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAata                          <  1:210318/101‑1 (MQ=21)


                                                                     cccgaaaAGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAatat                         <  1:536724/97‑1 (MQ=17)


                                                                     cccgaaaAGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGGGACATTTGCGGCAAGGTGAAAGGA..TGGGGCTTATCTTGCCCCAAatat                         >  2:1809181/5‑101 (MQ=9)


                                                                      gCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAatat                         <  2:3949620/101‑1 (MQ=25)


                                                                      gCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAatat                         <  2:1115952/101‑1 (MQ=25)


                                                                       cAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATc                        >  2:3948178/1‑101 (MQ=21)


                                                                       cAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATc                        <  1:4044003/101‑1 (MQ=25)


                                                                        gaaaAGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATccc                      <  2:2171381/100‑1 (MQ=17)


                                                                        gaaaAGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATccc                      >  1:2592976/2‑101 (MQ=17)


                                                                         aaaGGGGGGAGCTG.CCCCCCTC.TTGGCCTTT.GGCCAATT.CACCCCCCGCGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATacc                      >  2:551273/1‑101 (MQ=18)


                                                                         aaaAGGGGGCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGGGAAAGGA.TGGGGGTT.ATCTTGCCCCAAATATCCCg                     >  1:131524/1‑101 (MQ=17)


                                                                           aagggggCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCggg                   >  2:1863998/3‑101 (MQ=18)


                                                                            ggggggCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCggg                   <  2:211406/101‑1 (MQ=25)


                                                                            ggggggCCCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCggg                   <  2:2338473/101‑1 (MQ=25)


                                                                            agggggCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggg                  >  1:529732/2‑101 (MQ=18)


                                                                            agggggCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggg                  >  2:4098878/2‑101 (MQ=18)


                                                                             gggggCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCggggg                 >  2:1643891/1‑101 (MQ=18)


                                                                             gggggCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCggggg                 <  1:1490286/101‑1 (MQ=18)


                                                                             gggggCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCgggg                  <  2:1443836/101‑1 (MQ=25)


                                                                              ggggCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggt                >  2:3483856/1‑100 (MQ=18)


                                                                              ggggCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggg                >  2:2878552/1‑101 (MQ=18)


                                                                              ggggCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggg                >  2:4027452/1‑101 (MQ=18)


                                                                               gggCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCgggggg                <  1:3920565/101‑1 (MQ=25)


                                                                                ggCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtga              <  1:439035/101‑4 (MQ=21)


                                                                                ggCGCTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGa               <  2:2075963/101‑1 (MQ=25)


                                                                                 gcgcTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgag             <  2:3270389/101‑5 (MQ=21)


                                                                                  cgcTG.CCCCCCTC.TTGGCCTTC.GGCCCATT.CACCCCCCCAGGTATTTTGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCCCAAATATCCCcgggggggg             >  1:3457657/1‑98 (MQ=21)


                                                                                   gcTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGNGNGtn            >  1:1363739/1‑100 (MQ=25)


                                                                                    cTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGGGAAATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgaggcg          >  1:960724/1‑94 (MQ=25)


                                                                                    cTG.CCCCCCTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTcc           >  2:236615/1‑101 (MQ=25)


                                                                                      g.CCCCCCTC..TGG.CTTC...CCCATT.CCCCCCCCGGGGTATTTCGGGCAAGATGAAAGGCATCCGGTTTCATCTTGCTGCAAATATCCCGGGGGGAGTccgcttg      <  1:3647441/101‑6 (MQ=17)


                                                                                         cccccTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaa       <  1:14955/101‑1 (MQ=25)


                                                                                         cccccTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaa       >  1:313449/1‑101 (MQ=37)


                                                                                         cccccTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaa       >  2:3092790/1‑101 (MQ=37)


                                                                                          ccccTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaaa      <  1:3978114/101‑1 (MQ=37)


                                                                                           tcttc.tTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAg     <  1:337064/98‑1 (MQ=25)


                                                                                           cccTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAg     >  1:1352283/1‑101 (MQ=37)


                                                                                           cccTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAg     >  1:1208728/1‑101 (MQ=37)


                                                                                            ccTC.TTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAgg    >  2:2793688/1‑101 (MQ=37)


                                                                                             ctc.tTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGa   >  1:336164/1‑101 (MQ=37)


                                                                                             ctc.tTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGa   >  1:3750789/1‑101 (MQ=37)


                                                                                              tc.tTGGCCTTC.GGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGAc  >  1:2479405/1‑101 (MQ=37)


                                                                                              tc.tTGGCCTTC.GGCCAATT.CAACCCCCGAGGAATTTGGAGCAAGATG.AAAGACCATGGGTTAATCTTGAATCAAATATCCCGGGGGGAGTCCTGAAAgaga  >  2:337013/1‑98 (MQ=25)


GGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGG.CTTC.GGCCAATT.CGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGAC  >  NC_014034/2640062‑2640255

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 24 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG