| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,678,900 | +C | 96.0% | intergenic (+29/+58) | RCAP_rcc02495 → / ← RCAP_rcc02496 | GTPase, EngC family/group 1 glycosyl transferase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,678,900 | 1 | .→C | 96.0% | 8.8 ‑4.3 ‑0.1 | 125 | intergenic (+29/+58) | RCAP_rcc02495/RCAP_rcc02496 | GTPase, EngC family/group 1 glycosyl transferase |
| Reads supporting (aligned to +/- strand): new base (71/49): ref base (0/5): total (71/54) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.35e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.45e-01 | ||||||||||
Only 100 of 162 total aligned reads displayed.
GCCCGCGACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CG.CCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGCG > NC_014034/2678800‑2678993
|
gCCCGCGACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.Cg > 1:3817117/1‑101 (MQ=255)
gcgACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CG.cccc > 1:2206010/1‑101 (MQ=255)
cgACCGCGCCTTCGGCAAGATGGCCCGGGCGCCGCTGCGCGACAAATCCCGGCTGCGCGGCTACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CG.ccccc < 1:3501980/101‑2 (MQ=255)
cgACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CG.ccccc > 1:2177018/1‑100 (MQ=255)
cgACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CG.ccccc < 1:1941061/101‑2 (MQ=255)
gACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CG.ccccca > 2:126756/1‑99 (MQ=255)
gACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CG.ccccca > 2:1955933/1‑99 (MQ=255)
gACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CG.ccccca < 2:3402597/101‑3 (MQ=255)
aCCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CG.cccccac < 1:140968/101‑4 (MQ=255)
ggatttcTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CG.cccccacc > 2:3334305/7‑97 (MQ=255)
cgcgCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CG.cccccaccg > 2:2171675/1‑96 (MQ=255)
cgcgCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CG.cccccaccg > 2:3458343/1‑96 (MQ=255)
cgcCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACcgcg > 1:2740035/1‑101 (MQ=255)
cgcCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACcgcg < 1:1699306/101‑1 (MQ=255)
gcCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCgcgc > 1:107019/1‑101 (MQ=255)
gcCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCgcgc > 2:2521147/1‑101 (MQ=255)
gcCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCgcgc > 1:1506810/1‑101 (MQ=255)
ccTTCGACAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGcc < 2:2071504/101‑1 (MQ=255)
cTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGccc > 1:14235/1‑101 (MQ=255)
ttCGGCAAGATGGCCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCg < 2:2043663/101‑1 (MQ=255)
cGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCgcc > 2:2993308/1‑99 (MQ=255)
ggcagagggACCCGGGCGGCGCAGCGATACAAATCCCGGCGGCGCTGCGACTCACGCCGGTTCGGGGGCCGGTGGGG.ACAT.CGCCCCCACCGCGCCCGAcg < 2:1660744/93‑1 (MQ=255)
cAAGAAGCCCCGGGGGGCGCTGCGCGCCAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCCCCGCGCCCGAcgcg < 2:4179253/101‑1 (MQ=255)
aaGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGAcgcgc > 2:3714590/1‑101 (MQ=255)
aGATGCCCCGGGCGGCGCTGCGCGACAAACCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGAcgcgcg < 1:2310926/101‑1 (MQ=255)
tgccccGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCgcggcg < 1:1375592/98‑1 (MQ=255)
gACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCCCCGCGCCCGACGCGcggcgg > 2:3063097/1‑101 (MQ=255)
gACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGcggcgg < 2:3498341/101‑1 (MQ=255)
gtccGGGGGGTGCTTCGCAACAAATCCCGGCTGCGCCGCGACTGGCGCCGGTTGGGGTGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCggg < 2:2733318/99‑1 (MQ=25)
cGGGGGGCGCTGCGCGACAAATCCAGGCTGCGCGGCGACTGACGCCGGTTCGGGGGGCGGGGGTG.GCCT.CGCCCCCCCCGCGCCCAACGCCCCGCCGGCtt > 2:1838556/1‑101 (MQ=255)
cGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCtt > 1:1290844/1‑101 (MQ=255)
gggCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTg > 2:1565148/1‑101 (MQ=255)
ggcggcGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTgc < 2:1479613/101‑1 (MQ=255)
gggcgCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTgccc < 1:2521331/100‑1 (MQ=255)
ggcgCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTgcccg > 1:1469429/1‑101 (MQ=255)
gcggcgcGACAACCCCGGGCGGCGCGGCGACTGGCGCGGGTGGGGGGGCGGGGGGGGCCCCC.CC.CCCCCCCGCGCCCGACGCGCGGCGGGCTTgcccgccc < 1:2993446/98‑1 (MQ=12)
gcTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTgcccgccc > 2:3466703/1‑101 (MQ=255)
gcTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTgcccgccc < 2:518863/101‑1 (MQ=255)
cTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCa > 2:2570946/1‑101 (MQ=255)
tGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTgcccgcccca > 2:1794039/1‑99 (MQ=255)
tGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCaa > 1:1374450/1‑101 (MQ=255)
gcgcGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAag > 1:3708030/1‑101 (MQ=255)
gcgCCAAACCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAagga < 1:1247469/101‑1 (MQ=37)
gACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAaggagg < 2:1740387/101‑1 (MQ=255)
gACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAaggagg > 1:464351/1‑101 (MQ=255)
gACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAaggagg > 2:3221499/1‑101 (MQ=255)
gACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAaggagg > 2:1360213/1‑101 (MQ=255)
gACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCCTGCCCGCCCCaggagg > 2:309796/1‑101 (MQ=37)
cAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCCCCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGgc < 1:4147213/101‑1 (MQ=255)
aTCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGcc > 2:784498/1‑101 (MQ=255)
aTCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGcc < 1:620181/101‑1 (MQ=255)
tCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGccc > 2:1181002/1‑101 (MQ=255)
cccGGCTGCGCGGCGACTGACGCCTGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGAGCGGCGGGCTTGCCCGCCCAAGGAGGGCGcccc > 1:3607780/1‑101 (MQ=25)
cccGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGcccc > 1:4038075/1‑101 (MQ=255)
ccGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGccccc < 1:2490165/101‑1 (MQ=255)
ggCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCgg > 1:846669/1‑101 (MQ=255)
ggCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCgg > 1:2765129/1‑101 (MQ=255)
ggCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCgg < 1:2387100/101‑1 (MQ=255)
ggCGGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCgg < 1:126780/101‑1 (MQ=255)
gagcgggtgcTGCCGGCGGTTGGGGGGCCGGTGGGG.GCAT.CGCCCCCGCGGCGCCCGACGCGCGGGGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGAtct < 2:2320246/92‑1 (MQ=17)
cgcgGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGGGGGGCCCCCCGGAtccc > 1:2378808/1‑99 (MQ=25)
cgcgGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGAtctc < 1:1549187/101‑1 (MQ=255)
cgcgGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGAtctc > 2:3188126/1‑101 (MQ=255)
gcggcgACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCa < 2:2178360/101‑1 (MQ=255)
gcggcgACTGACGCCGGTTCGGGGGCCGGGGGGG.CCAT.CGCCCCCCCCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCa < 1:198902/101‑1 (MQ=25)
gggcgACTGACGCCGGTCCGGGGCCCGGTGGGT.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAg < 2:4115908/100‑1 (MQ=25)
ggcgACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAgc > 2:766955/1‑101 (MQ=255)
gACTGACGCGGGTTCGGGGGCGGGTGGGA.GCATCCC.CCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCa < 2:3522335/101‑1 (MQ=25)
gACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCa > 1:2856606/1‑101 (MQ=255)
gACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCa > 2:933859/1‑101 (MQ=255)
cTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAAc < 2:2861497/101‑1 (MQ=255)
tGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACg > 2:2032851/1‑101 (MQ=255)
gcGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTg < 2:2956967/100‑1 (MQ=255)
aCGCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTg < 2:375207/101‑1 (MQ=255)
cGCCGGTTCGGGGGCCGGTGGGG.GCATCCC.CCCCCCCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTgc < 1:1181096/101‑1 (MQ=25)
gCCGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTgcc < 2:3182460/101‑1 (MQ=255)
ccGGTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTgccg < 1:3425720/101‑1 (MQ=255)
ttcggggggCCGGTGGGG.GCTTCCC.CCCCACCGCCCCCGACGCGCGGCGGGCTTTCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGccgccc < 1:3460188/97‑1 (MQ=25)
gTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGccgccc > 2:3677740/1‑101 (MQ=255)
gTTCGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGccgccc > 1:544244/1‑101 (MQ=255)
tgcGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGccgcccg < 2:1466098/99‑1 (MQ=255)
cGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCcgcccgcc > 2:2687653/1‑101 (MQ=255)
cGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCcgcccgcc > 1:1884927/1‑101 (MQ=255)
cGGGGGCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCcgcccgcc > 2:1196618/1‑101 (MQ=255)
cGGGGGCCGGGGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCcgcccgcc < 1:286556/101‑1 (MQ=255)
gggggCGGGTGGGG.GCAC.CGCCCCCCCCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCccgccg < 1:1956059/101‑1 (MQ=21)
gggggCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCACGCCCAAGGAGGGCGCCCCCGGAGCTCAGCGCAACGCgccgccgaacg > 1:3503753/1‑96 (MQ=21)
ggCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGtct > 2:3142579/1‑101 (MQ=255)
ggCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGtct > 1:3084862/1‑101 (MQ=255)
ggCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGtct > 1:3122539/1‑101 (MQ=255)
gCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGtctc < 2:1926575/101‑1 (MQ=255)
gCCGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGtcta > 2:3371816/1‑100 (MQ=255)
cGGTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGa > 1:740228/1‑101 (MQ=255)
cGGTGGGG.CCCT.CGCCCCCGCCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGa < 1:1851376/101‑1 (MQ=25)
ggggggg.gCAC.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGAc < 1:3334550/98‑1 (MQ=25)
ggTGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGAc > 1:331757/1‑101 (MQ=255)
tGGGG.GCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACaa > 2:1600134/1‑101 (MQ=255)
gggg.gCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGGCTCGCCaca > 1:768923/1‑99 (MQ=25)
gggg.gCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCG.TCGCCGTCTCgtattcg < 2:14224/101‑7 (MQ=21)
g.gCAT.CGCCCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGCg > 1:3685151/1‑101 (MQ=255)
|
GCCCGCGACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGG.GCAT.CG.CCCCACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGCG > NC_014034/2678800‑2678993
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 23 ≤
ATCG
< 33 ≤
ATCG
< 39 ≤
ATCG
|