BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	3,532,987	+G	91.6%	intergenic (‑6/‑19)	RCAP_rcc03340 ← / → RCAP_rcc03341	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	3,532,987	1	.→G	91.6%	41.0 0.0 ‑0.5	179	intergenic (‑6/‑19)	RCAP_rcc03340/RCAP_rcc03341	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): new base (83/81): ref base (8/7): total (91/88)
Fisher's exact test strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.07e-01

Only 100 of 197 total aligned reads displayed.


AGCGGGGAAAGCGGCGCC.TGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTC.GGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGC.GG.CCC..G.CCCTTCGATCCAGTGCAGCCAACCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.CTGCGCGCCCGGCAGGGCCGCCAGATCGTGC  >  NC_014034/3532888‑3533080


aGCGGGGAAAGCGGCGCC.TGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAGGCTGc                                                                                                     >  2:857963/1‑101 (MQ=255)


 gCGGGGAAAGCGGCGCC.TGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGC.g                                                                                                   <  1:1225579/101‑1 (MQ=255)


 gCGGGGAAAGCGGCGCC.TGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGC.g                                                                                                   <  2:2841512/101‑1 (MQ=255)


   ggggAAAGCGGCGCC.TGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGC.ggg                                                                                                 <  2:1886905/101‑2 (MQ=255)


   ggggAAAGCGGCGCC.TGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGC.ggg                                                                                                 >  1:4063919/1‑100 (MQ=255)


    gggAAAGCGGCGCC.TGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGC.gggc                                                                                                <  1:4082910/101‑3 (MQ=255)


    gggAAAGCGGCGCC.TGTCGGCCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGC.gggc                                                                                                <  2:614844/101‑3 (MQ=255)


     ggAAAG.GGCGCCTTGTCGGTCCAGCCGACTGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGC.Gg.gcc                                                                                              <  1:1002933/101‑1 (MQ=255)


      gAAAGCGGCGCC.TGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGC.Gg.gccc                                                                                             <  2:3129210/101‑2 (MQ=255)


       aaaGCGGCGCC.TGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGC.Gg.gcccg                                                                                            >  2:2371987/1‑99 (MQ=255)


       aaaGCGGCCCC.TGTCGGCCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGC.Gg.gcccg                                                                                            <  2:3300829/101‑3 (MQ=255)


        aggcggccCC.TGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGC.Gg.gcccgg                                                                                           <  2:3579885/99‑4 (MQ=255)


        aaGCGGCGCC.TGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGC.Gg.gcccgg                                                                                           >  2:2424558/1‑98 (MQ=255)


        aaGCGGCGCC.TGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGC.Gg.gcccgg                                                                                           >  1:2363907/1‑98 (MQ=255)


        aaGCGGCGCC.TGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGC.Gg.gcccgg                                                                                           >  2:1143113/1‑98 (MQ=255)


          gcggcgCC.TGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGC.Gg.gcccggcc                                                                                         >  2:1686689/1‑96 (MQ=255)


          cgggccCC.TGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGC.Gg.gcccggcc                                                                                         <  1:2233169/99‑6 (MQ=255)


              cgcC.TGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTc                                                                                    <  2:4118670/101‑1 (MQ=255)


              cgcC.TGTCGGCCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTc                                                                                    <  2:1454583/101‑1 (MQ=255)


               gcC.TGTCGGTCCAGCCGCCCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCg                                                                                   <  1:2149667/101‑1 (MQ=255)


                   tGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATc                                                                                <  1:3114221/101‑1 (MQ=255)


                    gTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATcc                                                                               <  1:2672830/101‑1 (MQ=255)


                    gTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATcc                                                                               >  1:1948035/1‑101 (MQ=255)


                     tCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCa                                                                              <  1:183910/101‑1 (MQ=255)


                      cGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAg                                                                             <  2:2292931/101‑1 (MQ=255)


                       ggTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.GCCTTCGATCCAGt                                                                            >  2:4003576/1‑101 (MQ=255)


                       ggTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGt                                                                            <  1:2721444/101‑1 (MQ=255)


                       ggTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGt                                                                            >  1:560606/1‑101 (MQ=255)


                       ggTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGt                                                                            <  2:3827342/101‑1 (MQ=255)


                        gTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTg                                                                           >  1:1076926/1‑101 (MQ=255)


                         tCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGc                                                                          <  1:2413272/101‑1 (MQ=255)


                               cgaccgaAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCag                                                                    >  2:3682064/1‑100 (MQ=255)


                                gaccgaAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCagc                                                                   >  1:2625053/1‑99 (MQ=255)


                                gaccgaAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCagc                                                                   <  1:1727765/101‑3 (MQ=255)


                                  ccgaAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCg                                                                 >  2:1258737/1‑101 (MQ=255)


                                  ccaaaaGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCg                                                                 <  1:811737/98‑1 (MQ=255)


                                   cgaAGGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGt                                                                <  2:2865791/101‑1 (MQ=255)


                                    gaAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTc                                                               >  1:4020972/1‑101 (MQ=255)


                                    gaAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTc                                                               >  1:784167/1‑101 (MQ=255)


                                    gaAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTc                                                               >  1:2537828/1‑101 (MQ=255)


                                     aaaGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTcc                                                              >  1:3356737/1‑101 (MQ=255)


                                     aaaGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTcc                                                              >  2:1632873/1‑101 (MQ=255)


                                      aaGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCt                                                             <  1:2701548/101‑1 (MQ=255)


                                       agcagcCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCACCCAGCCGTCCTc                                                            <  1:4167803/101‑1 (MQ=255)


                                        gcagcCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCg                                                           <  2:2133313/101‑1 (MQ=255)


                                          agcCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGAc                                                         >  2:26105/1‑101 (MQ=255)


                                          agcCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGAc                                                         >  2:156512/1‑101 (MQ=255)


                                           gcCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGAcc                                                        <  1:2949524/101‑1 (MQ=255)


                                           gcCGCGCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGAcc                                                        <  2:1508182/101‑1 (MQ=255)


                                             cgcgCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGc                                                      >  2:1390525/1‑101 (MQ=255)


                                             cgcgCCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGc                                                      <  1:979506/101‑1 (MQ=255)


                                              gcgcCTCGGCCAGCCGGGGGTCGGGG.GCGATCGGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCa                                                     <  2:3948844/101‑1 (MQ=255)


                                                gcCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAAc                                                   >  2:2784715/1‑101 (MQ=255)


                                                gcCTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAAc                                                   <  2:2106705/101‑1 (MQ=255)


                                                 ccgcGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAAcc                                                  <  2:3753022/98‑1 (MQ=255)


                                                 ccTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAAcc                                                  <  2:291642/101‑1 (MQ=255)


                                                 ccTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAAcc                                                  <  1:3292857/101‑1 (MQ=255)


                                                 ccTCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAAcc                                                  <  1:156726/101‑1 (MQ=255)


                                                   tCGGCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGt                                                >  1:1275517/1‑101 (MQ=255)


                                                      gCCAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGc                                             >  1:3919250/1‑101 (MQ=255)


                                                       ccAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGcc                                            <  2:1222925/101‑1 (MQ=255)


                                                       ccAGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGcc                                            <  2:3363184/101‑1 (MQ=255)


                                                         aGCGGGGGGTC.GGGTGCGATCTGCGCCATCGCGTAGCAAAGCTGC.GGTCCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGcccc                                          <  2:2404763/101‑1 (MQ=255)


                                                         aGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGcccc                                          <  2:4081856/101‑1 (MQ=255)


                                                         aGCCGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGcccc                                          >  1:1657410/1‑101 (MQ=255)


                                                            cGGGGGTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGca                                       >  1:3505671/1‑101 (MQ=255)


                                                             gggggTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGcac                                      >  1:2085771/1‑101 (MQ=255)


                                                              ggggTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGcaca                                     <  1:2190156/101‑1 (MQ=255)


                                                               gggTCGGGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAg                                    >  2:587054/1‑101 (MQ=255)


                                                                  tcgggg.gCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.c                                <  2:3613429/98‑1 (MQ=255)


                                                                  tcgggg.gCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.c                                <  2:318774/98‑1 (MQ=255)


                                                                   cgggg.gCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cc                               <  1:1495088/99‑2 (MQ=255)


                                                                   cgggg.gCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cc                               >  2:1031815/3‑100 (MQ=255)


                                                                    gggg.gCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cct                              >  2:480636/2‑99 (MQ=255)


                                                                    gggg.gCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cct                              <  2:3528433/100‑3 (MQ=255)


                                                                    gggg.gCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCCCGACCGCAACCGTCGCCCCGCACAGAT.cct                              <  1:3767588/100‑3 (MQ=255)


                                                                     ggg.gCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cctg                             <  2:2434077/101‑4 (MQ=255)


                                                                      gg.gCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cctgc                            <  1:2015214/101‑5 (MQ=255)


                                                                       g.gCGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cctgcg                           >  1:3024875/1‑96 (MQ=255)


                                                                          cGATCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTgcgcg                          <  2:3002775/101‑1 (MQ=255)


                                                                            aTCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGcc                        >  2:2332455/1‑101 (MQ=255)


                                                                             tCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGccc                       <  1:2934720/101‑1 (MQ=255)


                                                                             tCTGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGccc                       <  1:3076837/101‑1 (MQ=255)


                                                                               tGCGCCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCgg                     >  2:320989/1‑101 (MQ=255)


                                                                                gcgcCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGc                    >  2:910418/1‑101 (MQ=255)


                                                                                gcgcCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGc                    <  2:1714326/101‑1 (MQ=255)


                                                                                gcgcCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGACGCCCCGCACAGATCCTGCGCGCCCGGc                    >  2:2668146/1‑101 (MQ=255)


                                                                                 cgcCATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCa                   >  1:691145/1‑101 (MQ=255)


                                                                                   ccATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAgg                 <  2:4063658/101‑1 (MQ=255)


                                                                                   ccATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAgg                 <  1:480693/101‑1 (MQ=255)


                                                                                    cATCGCGGCGCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAggg                >  2:200128/1‑101 (MQ=255)


                                                                                        gcggcgCAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGgccgc            >  2:2732989/1‑101 (MQ=255)


                                                                                            cgcAAAGCTGC.GG.GCCGGG.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGa        >  1:3699421/1‑101 (MQ=255)


                                                                                             gcAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGAt       >  1:3434053/1‑101 (MQ=255)


                                                                                             ccAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGAt       <  2:2060993/100‑1 (MQ=255)


                                                                                              cAAAGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGATc      <  2:2537637/101‑1 (MQ=255)


                                                                                              cAAAGCTGCGGG.CCC..GCCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGATc      <  1:1390625/101‑1 (MQ=255)


                                                                                                aaGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGATCGt    <  2:784089/101‑1 (MQ=255)


                                                                                                aaGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGATCGt    >  1:251775/1‑101 (MQ=255)


                                                                                                 aGCTGCGGG.CCCG.G.CCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGATCGTg   >  2:2606749/1‑101 (MQ=255)


AGCGGGGAAAGCGGCGCC.TGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTC.GGG.GCGATCTGCGCCATCGCGGCGCAAAGCTGC.GG.CCC..G.CCCTTCGATCCAGTGCAGCCAACCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.CTGCGCGCCCGGCAGGGCCGCCAGATCGTGC  >  NC_014034/3532888‑3533080

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG