BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	3,532,992	+G	100%	intergenic (‑11/‑14)	RCAP_rcc03340 ← / → RCAP_rcc03341	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	3,532,992	1	.→G	100.0%	652.6	176	intergenic (‑11/‑14)	RCAP_rcc03340/RCAP_rcc03341	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): new base (88/86): ref base (0/1): total (88/88)

Only 100 of 193 total aligned reads displayed.


GGAAAGCGGCGCC.TGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTC.GGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC.GGCCC..GCCCTTCGATCCAGTGCAGCCAACCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.CTGCGCGCCCGGCAGGGCCGCCAGATCGTGCCGGATC  >  NC_014034/3532893‑3533086


ggAAAG.GGCGCCTTGTCGGTCCAGCCGACTGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC.Gggcc                                                                                                   <  1:1002933/101‑1 (MQ=255)


   aggcggccCC.TGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC.Gggcccgg                                                                                                <  2:3579885/99‑4 (MQ=255)


     cgggccCC.TGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC.Gggcccggcc                                                                                              <  1:2233169/99‑6 (MQ=255)


         cgcC.TGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTc                                                                                          <  1:1366526/101‑1 (MQ=255)


         cgcC.TGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTc                                                                                          <  2:1992044/101‑1 (MQ=255)


         cgcC.TGTCGGCCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTc                                                                                          <  2:1454583/101‑1 (MQ=255)


          gcC.TGTCGGTCCAGCCGCCCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCg                                                                                         <  1:2149667/101‑1 (MQ=255)


           cc.TGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGa                                                                                        >  2:4036843/1‑101 (MQ=255)


            c.TGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGAt                                                                                       <  1:2698105/101‑1 (MQ=255)


            c.TGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGAt                                                                                       >  2:4089603/1‑101 (MQ=255)


                tCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCa                                                                                    <  2:520595/101‑1 (MQ=255)


                gcGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCa                                                                                    <  2:1701140/100‑1 (MQ=255)


                 cGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAg                                                                                   <  2:3232608/101‑1 (MQ=255)


                  ggTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GGCCTTCGATCCAGt                                                                                  >  2:4003576/1‑101 (MQ=255)


                  ggTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGt                                                                                  >  2:2315501/1‑101 (MQ=255)


                  ggTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGt                                                                                  >  1:560606/1‑101 (MQ=255)


                  ggTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGt                                                                                  >  1:2937323/1‑101 (MQ=255)


                   gTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTg                                                                                 >  1:1076926/1‑101 (MQ=255)


                    tCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGc                                                                                <  1:2518935/101‑1 (MQ=255)


                     ccAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCa                                                                               >  2:2709915/1‑101 (MQ=255)


                         ccgaccgaAAGCACCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCa                                                                           <  1:2600357/101‑1 (MQ=255)


                          cgaccgaAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCag                                                                          >  1:4021439/1‑100 (MQ=255)


                              cgaAGGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGt                                                                      <  2:2865791/101‑1 (MQ=255)


                              cgaAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGt                                                                      >  1:2449091/1‑101 (MQ=255)


                               gaAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTc                                                                     >  2:4068300/1‑101 (MQ=255)


                               gaAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTc                                                                     <  1:2704969/101‑1 (MQ=255)


                                aaaGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTcc                                                                    >  2:2386626/1‑101 (MQ=255)


                                aaaGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTcc                                                                    >  1:3356737/1‑101 (MQ=255)


                                 aaGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCt                                                                   <  1:3817535/101‑1 (MQ=255)


                                   gcagcCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCg                                                                 <  2:2133313/101‑1 (MQ=255)


                                     agcCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGAc                                                               >  2:26105/1‑101 (MQ=255)


                                     agcCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGAc                                                               >  1:3953205/1‑101 (MQ=255)


                                     agcCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGAc                                                               >  1:1812376/1‑101 (MQ=255)


                                       ccGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCg                                                             <  2:658283/101‑1 (MQ=255)


                                       ccGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC.GGGCCTGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCg                                                             <  1:1943310/101‑1 (MQ=255)


                                        cgcgCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGc                                                            >  1:2646036/1‑101 (MQ=255)


                                         gcgcCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCa                                                           <  1:4147739/101‑1 (MQ=255)


                                         gcgcCTCGGCCAGCCGGGGGTCGGGGGCGATCGGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCa                                                           <  2:3948844/101‑1 (MQ=255)


                                          cgcCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCaa                                                          <  1:750726/101‑1 (MQ=255)


                                           gcCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAAc                                                         >  2:3145680/1‑101 (MQ=255)


                                           gcCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAAc                                                         <  2:2106705/101‑1 (MQ=255)


                                           gcCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAAc                                                         >  1:3111678/1‑101 (MQ=255)


                                            ccTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAAcc                                                        <  2:291642/101‑1 (MQ=255)


                                            ccTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAAcc                                                        <  1:3292857/101‑1 (MQ=255)


                                             cTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCg                                                       >  2:1236521/1‑101 (MQ=255)


                                              ccGGCTAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGt                                                      <  2:1535192/100‑1 (MQ=255)


                                               cGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTc                                                     <  1:2784934/101‑1 (MQ=255)


                                                ggCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCg                                                    >  2:2787495/1‑101 (MQ=255)


                                                  ccAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGcc                                                  <  2:1008969/101‑1 (MQ=255)


                                                     gCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCg                                               >  2:1644692/1‑101 (MQ=255)


                                                       cGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGca                                             >  1:3505671/1‑101 (MQ=255)


                                                       cGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGca                                             <  1:80578/101‑1 (MQ=255)


                                                        gggggTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGcac                                            >  1:141804/1‑101 (MQ=255)


                                                        gggggTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGcac                                            >  1:1670960/1‑101 (MQ=255)


                                                        gggggTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGcac                                            >  1:2085771/1‑101 (MQ=255)


                                                         ggggTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGcaca                                           <  1:2190156/101‑1 (MQ=255)


                                                           ggtcgggggCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGa                                         >  1:154826/6‑101 (MQ=255)


                                                           ggtcgggggCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGa                                         <  2:1853499/96‑1 (MQ=255)


                                                             tcgggggCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.c                                      <  2:3613429/98‑1 (MQ=255)


                                                              cgggggCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cc                                     >  2:3705825/3‑100 (MQ=255)


                                                              cgggggCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cc                                     >  2:1588057/3‑100 (MQ=255)


                                                              cgggggCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cc                                     >  2:2410254/3‑100 (MQ=255)


                                                               gggggCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cct                                    >  1:879121/2‑99 (MQ=255)


                                                                ggggCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cctg                                   <  2:2434077/101‑4 (MQ=255)


                                                                ggggCGATCTGCGCCATCGCGGCCCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGGGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cctg                                   <  1:4233348/101‑4 (MQ=255)


                                                                 gggCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cctgc                                  <  1:2015214/101‑5 (MQ=255)


                                                                 gggCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cctgc                                  <  2:1076832/101‑5 (MQ=255)


                                                                 gggCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cctgc                                  <  1:2386802/101‑5 (MQ=255)


                                                                  ggCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cctgcg                                 >  1:3024875/1‑96 (MQ=255)


                                                                    cGATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTgcgcg                                <  2:3002775/101‑1 (MQ=255)


                                                                     gATCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTgcgcgc                               >  2:136397/1‑101 (MQ=255)


                                                                      aTCTGCGCCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGcc                              >  2:3428031/1‑101 (MQ=255)


                                                                          gcgcCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGc                          >  2:910418/1‑101 (MQ=255)


                                                                          gcgcCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGACGCCCCGCACAGATCCTGCGCGCCCGGc                          >  2:2668146/1‑101 (MQ=255)


                                                                           cgcCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCa                         >  2:4195095/1‑101 (MQ=255)


                                                                           cgcCATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCa                         >  1:691145/1‑101 (MQ=255)


                                                                             ccATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAgg                       <  1:1580581/101‑1 (MQ=255)


                                                                              cATCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAggg                      >  2:200128/1‑101 (MQ=255)


                                                                               aTCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGgc                     >  1:1261108/1‑101 (MQ=255)


                                                                               aTCGCGGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGgc                     <  2:3626816/101‑1 (MQ=255)


                                                                                 cgcgGCGCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGgccg                   <  2:849432/101‑1 (MQ=255)


                                                                                   cggcgCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGgccgcc                 <  2:2332983/101‑1 (MQ=255)


                                                                                    ggcgCAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCa                <  2:3356492/101‑1 (MQ=255)


                                                                                     gcgcAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAg               <  2:2767735/101‑1 (MQ=255)


                                                                                      cgcAAAGCTGC.GGGCCGGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGa              >  1:3699421/1‑101 (MQ=255)


                                                                                       gcAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGAt             >  1:3434053/1‑101 (MQ=255)


                                                                                       ccAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGAt             <  2:2060993/100‑1 (MQ=255)


                                                                                        cAAAGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGATc            <  2:2537637/101‑1 (MQ=255)


                                                                                         aaaGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGATCg           >  2:3821603/1‑101 (MQ=255)


                                                                                           aGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGATCGTg         >  2:1164617/1‑101 (MQ=255)


                                                                                           aGCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGATCGTg         >  2:2606749/1‑101 (MQ=255)


                                                                                            gCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGATCGTGc        <  1:2315669/101‑1 (MQ=255)


                                                                                            gCTGCGGGCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGATCGTGc        >  2:3194977/1‑101 (MQ=255)


                                                                                             ctgcgggCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGATCGTGcc       <  1:740375/96‑1 (MQ=255)


                                                                                               gcgggCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGATCGTGCCgg     <  2:3918990/98‑1 (MQ=255)


                                                                                               gcgggCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGATCGTGCCgg     >  1:488066/4‑101 (MQ=255)


                                                                                                cgggCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGATCGTGCCGGa    >  2:2286201/3‑101 (MQ=255)


                                                                                                  ggCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGATCGTGCCGGATc  <  1:3215517/101‑1 (MQ=255)


                                                                                                  ggCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGATCGTGCCGGATc  <  1:3054080/101‑1 (MQ=255)


                                                                                                  ggCCCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCCTGCGCGCCCGGCAGGGCCGCCAGATCGTGCCGGATc  >  2:3122694/1‑101 (MQ=255)


GGAAAGCGGCGCC.TGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTC.GGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC.GGCCC..GCCCTTCGATCCAGTGCAGCCAACCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.CTGCGCGCCCGGCAGGGCCGCCAGATCGTGCCGGATC  >  NC_014034/3532893‑3533086

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG