| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 904,934 | +C | 87.8% | intergenic (+38/‑158) | RCAP_rcc00821 → / → murB | hypothetical protein/UDP‑N‑acetylmuramate dehydrogenase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 904,934 | 2 | .→C | 87.8% | 42.0 ‑4.5 ‑0.3 | 123 | intergenic (+38/‑158) | RCAP_rcc00821/murB | hypothetical protein/UDP‑N‑acetylmuramate dehydrogenase |
| Reads supporting (aligned to +/- strand): new base (62/46): ref base (3/12): total (65/58) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.10e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.37e-01 | ||||||||||
Only 100 of 136 total aligned reads displayed.
GGGCTGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTCTTTTTG.GCT..G..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTGCGGACG > NC_014034/904834‑905025
|
gggCTGAGGTTGCTGCGTTGGCCGGTGGGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..g < 1:465258/101‑1 (MQ=37)
gggCTGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..g < 2:2213855/101‑1 (MQ=255)
ggCTGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..G..c < 2:1785892/101‑1 (MQ=255)
gCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..G..cgccaaa < 1:475816/101‑7 (MQ=255)
gTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..G..cgcccaaat > 2:3490546/1‑93 (MQ=37)
gTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..G..cgccaaaat < 1:664858/101‑9 (MQ=37)
ctgctgcGCTGGCCGGTGCGGCCGTTCTTTGCCGCGATGCCCCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..G..cgccaaaat < 1:2774353/100‑9 (MQ=21)
tgctgcGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..G..cgcccaaatt > 1:3119576/1‑92 (MQ=37)
tgctgcGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..G..cgccaaaatt < 2:3065171/101‑10 (MQ=25)
ctgcGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCa > 2:2652758/1‑101 (MQ=25)
tgcGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCAc > 2:1083440/1‑101 (MQ=25)
tgcGCTGGCCGGTGCAGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCAc > 1:3368539/1‑101 (MQ=25)
cgcTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCAccc < 2:3743056/101‑1 (MQ=25)
gcTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCAcccc < 1:2818997/101‑1 (MQ=25)
gcTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCAcccc < 2:2525024/101‑1 (MQ=25)
cTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCAccccc < 1:4001016/101‑1 (MQ=25)
cTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCAccccc > 2:234196/1‑101 (MQ=21)
cTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCAccccc > 1:2250481/1‑101 (MQ=21)
cTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCAccccc > 2:3478166/1‑101 (MQ=21)
tGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCAcccccc > 1:2027886/1‑101 (MQ=21)
gCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCgg < 2:1403849/101‑1 (MQ=21)
ccGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCgtc > 2:2106583/1‑99 (MQ=21)
cGGTGCGGCGGCTTTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCg < 1:1100696/101‑1 (MQ=21)
ggTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGt > 1:932776/1‑101 (MQ=21)
tGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGGCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTAt < 1:2595750/101‑1 (MQ=21)
cggcggCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCCGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTAttt > 1:1692738/1‑101 (MQ=21)
ggcggcTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGGATTTg > 2:1966151/1‑101 (MQ=21)
ggcggcTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCCGCGTATTTg > 1:168958/1‑101 (MQ=21)
gcggcTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGc > 1:2145362/1‑101 (MQ=21)
gcggcTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGc < 1:2686109/101‑1 (MQ=21)
ggcTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCAc > 1:332303/1‑101 (MQ=21)
gcTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCAcc > 1:2505654/1‑101 (MQ=21)
tctTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAg < 1:2307154/101‑1 (MQ=21)
tctTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTCCCCCAg > 1:698531/1‑101 (MQ=18)
ctgtGCCGCGATGCAGCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAgg < 2:3733210/98‑1 (MQ=18)
ctTTGCCGCGATGCCGCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.CCTGCG..C..CAAAATTCGCCCCCCGGCGTATTTGCACCAgg < 2:2078688/101‑1 (MQ=18)
ctTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAgg > 2:2206456/1‑101 (MQ=21)
ctTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCCCTTTTGGATGC..G..C..CAAAATTCACCCCCCGGCGTATTTGCACCAgg > 1:1944190/1‑101 (MQ=21)
ttGCCGGGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGaa < 2:2972159/101‑1 (MQ=21)
ttGCCGCGCGGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..G..CGTCAAAATTCACCCCCCGGCGTATTTGCACCAGGaa < 1:1869156/101‑1 (MQ=18)
ttGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGaa > 1:4133086/1‑101 (MQ=21)
ttGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGaa < 1:3065829/101‑1 (MQ=21)
gtGCCGCGATGCGCGTGCTTGAGTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACGCCCCGGCGTATTTGCACCAGGaa < 1:849498/100‑1 (MQ=14)
tGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGaaa > 1:2761858/1‑101 (MQ=21)
gCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGaaaa > 1:1005319/1‑101 (MQ=21)
cgcgATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAg > 1:2076965/1‑101 (MQ=21)
gcgATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGc > 1:884564/1‑101 (MQ=21)
cgATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCCGCGTATTTGCACCAGGAAAAAAcc > 2:3599591/1‑101 (MQ=18)
aTGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGGCCg > 2:1010080/1‑101 (MQ=18)
aTGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCCGCGTATTTGCACCAGGAAAAAGCCCg > 1:898316/1‑101 (MQ=21)
gCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGc > 2:2146506/1‑101 (MQ=21)
aCCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGt > 1:1204091/1‑101 (MQ=21)
cGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..G..CG.CCAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGtttt < 1:319980/101‑1 (MQ=25)
ggCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCTCCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGtttt < 1:1948326/101‑1 (MQ=21)
ggCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGtttt > 1:4188168/1‑101 (MQ=21)
gcgcGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGttttt > 1:245882/1‑101 (MQ=21)
cgACTGAGGTCGTGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCt < 1:3543555/101‑1 (MQ=21)
cgACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCt > 2:2810492/1‑101 (MQ=21)
aCTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTgg > 2:1749743/1‑101 (MQ=21)
tGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTc > 2:1432852/1‑101 (MQ=21)
tGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTc < 1:2982280/101‑1 (MQ=21)
tGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTc > 1:3598338/1‑101 (MQ=21)
tGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTc > 1:3946158/1‑101 (MQ=21)
gggCGGGGCAGGGGGGGGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGaa < 1:1553547/101‑1 (MQ=21)
ggCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCAACCCCCCGCGCATTTGCACCCGGAAAAAACCCGGCGCTTTTCCCGGTCGaaa > 1:2926706/1‑101 (MQ=17)
ggggCAGGGGGGCCCTCGCCCCCTC.TTTTG.GCTGCG..C..CAAAAGTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAATTAc < 1:3321585/101‑1 (MQ=25)
ggCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTCGTCGAAATACGc < 1:2294230/101‑1 (MQ=21)
gCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGcc < 2:1300428/101‑1 (MQ=21)
gCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGcc > 1:3126339/1‑101 (MQ=21)
gCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGcc > 1:1107629/1‑101 (MQ=21)
cAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCg < 1:3985608/101‑1 (MQ=21)
aGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCgg > 1:2395748/1‑101 (MQ=25)
gggggCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCgggg > 2:2361629/1‑101 (MQ=25)
ggggCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCggggg < 2:3211739/101‑1 (MQ=25)
gggCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCgggggg < 1:1083534/101‑1 (MQ=25)
gggCGCTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGGCGAAATACGCCgggggg > 1:3440769/1‑101 (MQ=25)
cgcTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGAGTTTTTCCTGGTCGAAATACGCCGGGGGGAGt > 2:4111239/1‑101 (MQ=25)
gcTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTTACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTc > 1:3752159/1‑101 (MQ=25)
gcTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTc < 1:2778391/101‑1 (MQ=37)
ccTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTc < 2:150122/100‑1 (MQ=37)
cTGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTcc < 2:2492131/101‑1 (MQ=37)
cTGCCCCCCTC.TTTTG.GCT..GCCC..CAAAATTCCCCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTcc < 1:1131337/101‑1 (MQ=25)
tGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCg < 2:4087144/101‑1 (MQ=37)
tGCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGCCCg > 1:1836429/1‑101 (MQ=37)
gCCCCCCTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGc < 2:4147419/101‑1 (MQ=37)
ccccccTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCt < 2:487348/101‑1 (MQ=37)
ccccccTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCt > 1:3811472/1‑101 (MQ=37)
ccccccTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCt > 1:4119402/1‑101 (MQ=37)
cccccTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCtt > 2:1557613/1‑101 (MQ=37)
cccccTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTACTGGTCGAAATACGCCGGGGGGAGGCCGCtt > 1:4105956/1‑101 (MQ=37)
ccccTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTg > 1:2034040/1‑101 (MQ=37)
ccccTC.TTTTG.GCTGCG..C..CAAAATCCCCCCCCCGGCGTATTTGCACCAGGAAAAACCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTg < 1:1432954/101‑1 (MQ=37)
cccTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTGc > 2:2760168/1‑101 (MQ=37)
cccTC.TTTTG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTGc < 1:368536/101‑1 (MQ=37)
ctcttttG.GCTGCG..C..CAAAATTCCCCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTGCgg < 2:2906729/98‑1 (MQ=38)
cttttG.GCTGCG..C..CAAAATTCATCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCCAAATACGCCGGGGGGAGTCCGCTTGCGGAc < 2:698454/100‑1 (MQ=25)
cttttG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTGCGGAc > 2:1601723/2‑101 (MQ=255)
cttttG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTGCGGAc > 1:1337409/2‑101 (MQ=255)
ttttG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTGCGGACg < 2:3368294/101‑1 (MQ=255)
ttttG.GCTGCG..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTGCGGACg > 1:1373925/1‑101 (MQ=255)
|
GGGCTGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTCTTTTTG.GCT..G..C..CAAAATTCACCCCCCGGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTGCGGACG > NC_014034/904834‑905025
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 23 ≤
ATCG
< 32 ≤
ATCG
< 39 ≤
ATCG
|